←Back to structures
KJ019119.1__AIX36167.1__Syn7803US65_185__00185
Bact-VirKJ019119.1__AIX36167.1__Syn7803US65_185__00185
Identity
- Accession:
- KJ019119 ↗
- Kingdom:
- phage
Quality
72.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Lowelvirus›
Synechococcus_phage_ACG-2014d
TaxID: 1493509
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-53
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6tmfT00 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.76 | 62.0 | 5.73e-01 | 95.9% | 70.3% |
| 2xzmV01 | 1.10.60.20 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 | 0.71 | 59.0 | 5.53e-01 | 95.9% | 75.4% |
| 2vqgA00 | 1.10.10.1280 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Alpha-helical porin B/porin C | 0.71 | 59.0 | 5.17e-01 | 95.9% | 72.4% |
| 3g2eB00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.64 | 55.0 | 3.77e-01 | 100.0% | 90.3% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 39.0 | 3.67e-01 | 93.9% | 56.5% |
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 48.0 | 4.54e-01 | 100.0% | 83.9% |
| 4i1mB02 | 1.25.40.830 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 44.0 | 3.32e-01 | 100.0% | 55.8% |
| 1wlmA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 43.0 | 3.56e-01 | 98.0% | 57.3% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 43.0 | 3.79e-01 | 98.0% | 57.7% |
| 1bqbA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.53 | 45.0 | 3.32e-01 | 100.0% | 34.7% |
| 3v7nA01 | 3.90.1380.10 | Alpha Beta › Alpha-Beta Complex › threonine synthase, domain 1, chain A › Threonine synthase, N-terminal domain | 0.52 | 43.0 | 3.58e-01 | 100.0% | 71.6% |
| 1wkbA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 40.0 | 2.42e-01 | 100.0% | 10.8% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3223970 | 592.1.1.2 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › Helicase_PWI | 0.71 | 58.0 | 5.11e-01 | 100.0% | 60.0% |
| 4926806 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 53.0 | 4.53e-01 | 98.0% | 85.6% |
| 4622475 | 563.1.1.0 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.65 | 52.0 | 4.50e-01 | 100.0% | 57.8% |
| 4951565 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.65 | 52.0 | 3.72e-01 | 100.0% | 85.6% |
| 2323801 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.64 | 53.0 | 4.59e-01 | 100.0% | 57.6% |
| 4990602 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.62 | 51.0 | 3.55e-01 | 100.0% | 88.6% |
| 4665790 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.61 | 47.0 | 3.33e-01 | 95.9% | 26.7% |
| 4956327 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.60 | 50.0 | 3.51e-01 | 100.0% | 95.0% |
| 3711570 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 48.0 | 3.47e-01 | 100.0% | 51.8% |
| 4945978 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.58 | 46.0 | 3.33e-01 | 100.0% | 94.4% |
| 3943035 | 639.2.1.0 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) | 0.55 | 47.0 | 4.36e-01 | 100.0% | 81.5% |
| 3818173 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.54 | 44.0 | 3.25e-01 | 98.0% | 32.9% |
| 5053233 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.53 | 45.0 | 3.84e-01 | 100.0% | 95.3% |
| 3854696 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.52 | 44.0 | 3.95e-01 | 95.9% | 98.6% |