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KJ024807.2__AHJ86764.1__BMBtpLA_55__00055

Bact-Vir

KJ024807.2__AHJ86764.1__BMBtpLA_55__00055

Identity

Accession:
KJ024807 ↗
Kingdom:
phage

Quality

91.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-123
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27459.1 best YoqU 50.9 2.50e-13 100.0% 79.6%
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.61 34.0 4.14e-01 91.7% 86.7%
3tu3B01 3.30.720.80 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.58 30.0 3.64e-01 100.0% 76.3%
2yztA00 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 29.0 3.65e-01 81.8% 90.9%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.54 31.0 3.83e-01 94.2% 98.5%
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.54 34.0 3.91e-01 100.0% 92.7%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 26.0 3.27e-01 95.9% 78.9%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.51 23.0 3.30e-01 76.0% 96.2%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.50 22.0 3.19e-01 93.4% 90.7%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3619159 292.2.1.5 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_3 0.64 38.0 4.24e-01 74.4% 74.7%
3581611 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 21.0 2.97e-01 76.9% 72.0%
4975150 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 27.0 3.70e-01 94.2% 93.3%
3275404 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 29.0 3.76e-01 86.8% 98.3%
3938955 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 23.0 3.45e-01 87.6% 100.0%
4026957 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 27.0 3.63e-01 94.2% 93.3%
5044373 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 27.0 3.59e-01 96.7% 91.7%
4357819 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.54 27.0 3.41e-01 95.0% 80.0%
4029093 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 26.0 2.41e-01 97.5% 34.8%
3875218 4.1.1.128 beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.53 28.0 3.63e-01 77.7% 93.8%
3616243 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 26.0 3.52e-01 95.0% 100.0%
3261395 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 27.0 3.54e-01 96.7% 100.0%
3914746 4.1.1.128 beta barrels › SH3 › SH3 › SH3 › Tudor_4 0.52 27.0 3.39e-01 77.7% 84.3%
3274582 4.1.1.365 beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C 0.51 24.0 3.36e-01 78.5% 96.4%
4816818 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.51 22.0 3.27e-01 89.3% 100.0%
3622846 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.51 23.0 3.28e-01 90.9% 100.0%
3474715 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.50 24.0 3.10e-01 94.2% 81.5%
3389169 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.50 26.0 3.02e-01 90.9% 69.4%
3671986 4.1.1.238 beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.50 27.0 3.37e-01 99.2% 88.6%