←Back to structures

KJ024807.2__AHJ86776.1__BMBtpLA_71__00071

Bact-Vir

KJ024807.2__AHJ86776.1__BMBtpLA_71__00071

Identity

Accession:
KJ024807 ↗
Kingdom:
phage

Quality

75.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Waukeshavirus› Bacillus_phage_vB_BtS_BMBtp3

TaxID: 1445809

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-59
PDB
Domain cluster: rep: MZ333456.2__QYI86529.1__X__00033__D10-66
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2b9dA01 3.30.160.330 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 37.0 4.30e-01 73.7% 74.4%
3h95A02 4.10.80.100 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › 0.63 34.0 4.09e-01 70.2% 93.3%
2kmcA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.60 41.0 3.41e-01 71.9% 73.5%
3pnrA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.59 48.0 3.27e-01 96.5% 81.7%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.55 38.0 3.75e-01 87.7% 66.7%
3hrgA01 3.30.420.250 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain 0.55 37.0 2.85e-01 77.2% 28.7%
2r5rA00 3.10.270.10 Alpha Beta › Roll › Urate Oxidase › Urate Oxidase; 0.55 47.0 3.14e-01 100.0% 63.0%
6kmoB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 39.0 2.40e-01 75.4% 31.1%
1l3iA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 36.0 2.60e-01 70.2% 38.9%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 37.0 3.05e-01 73.7% 62.4%
1oi2A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.54 43.0 3.28e-01 96.5% 85.2%
3if8A02 2.20.25.230 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.53 42.0 4.01e-01 100.0% 76.5%
3ce8A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 36.0 3.15e-01 71.9% 70.8%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.53 42.0 3.74e-01 100.0% 58.9%
4a55A01 3.10.20.770 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 44.0 2.81e-01 96.5% 31.3%
2zyzB02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.53 36.0 3.02e-01 70.2% 74.7%
5oj2B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 36.0 3.10e-01 73.7% 66.7%
3tvjB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 44.0 3.70e-01 100.0% 53.3%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 41.0 3.23e-01 93.0% 62.7%
3hm2A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 35.0 2.57e-01 70.2% 40.9%
1k8kA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.52 39.0 3.36e-01 80.7% 58.7%
1x67A01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.52 41.0 3.14e-01 87.7% 69.2%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 33.0 3.05e-01 78.9% 50.7%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.51 41.0 2.84e-01 94.7% 48.5%
1apyB00 3.60.20.30 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › (Glycosyl)asparaginase 0.51 34.0 2.65e-01 70.2% 61.7%
1vdmG00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 40.0 2.99e-01 91.2% 92.8%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3823190 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.66 54.0 3.90e-01 100.0% 31.9%
3305241 2003.1.5.153 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PCMT, Methyltransf_25 0.66 46.0 3.22e-01 73.7% 60.0%
3441614 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.63 44.0 3.10e-01 73.7% 61.6%
3959362 101.1.1.531 ↗ alpha arrays › HTH › HTH › Three-helical HTH › WS_DGAT_cat 0.63 48.0 3.64e-01 86.0% 40.0%
3447255 7.1.1.5 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 0.62 47.0 3.81e-01 94.7% 40.8%
3968270 3103.1.1.2 ↗ alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_13 0.60 44.0 3.56e-01 77.2% 54.5%
3454238 220.1.1.78 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.59 41.0 3.61e-01 73.7% 62.4%
4490768 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 42.0 2.28e-01 77.2% 9.7%
3969531 7581.1.1.0 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like 0.57 46.0 2.85e-01 93.0% 86.3%
3597002 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 40.0 3.35e-01 100.0% 40.0%
3454185 207.1.1.57 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_4,LRR_6,LRR_8 0.57 33.0 1.89e-01 100.0% 5.5%
3486912 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.56 46.0 3.07e-01 96.5% 30.4%
3187898 59.1.1.8 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › TFIIF_beta_N 0.55 39.0 3.10e-01 80.7% 36.8%
4964141 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.55 43.0 3.79e-01 100.0% 56.7%
4944869 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 37.0 2.94e-01 100.0% 32.3%
4405445 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 32.0 3.05e-01 71.9% 45.7%
3691245 2008.1.1.27 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RAI1 0.54 45.0 2.91e-01 93.0% 37.3%
4209798 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.53 41.0 3.65e-01 100.0% 57.6%
4060254 2008.1.1.59 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 0.53 43.0 2.85e-01 93.0% 25.6%
4959949 239.1.1.15 ↗ beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf 0.53 37.0 3.56e-01 73.7% 100.0%
150293 4.15.1.2 ↗ beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.53 42.0 3.64e-01 100.0% 55.2%
3529581 103.1.1.67 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UPF0515 0.52 30.0 3.28e-01 98.2% 68.9%
3618003 389.1.1.112 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › PF29137 0.52 35.0 3.61e-01 75.4% 74.5%
3628931 11.1.1.102 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_BRD 0.51 39.0 2.43e-01 89.5% 44.4%
4807857 101.1.21.1 ↗ alpha arrays › HTH › HTH › HTH in T7 RNA polymerase › RPOL_N 0.50 34.0 2.63e-01 73.7% 31.8%