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KJ025957.1__AHY25315.1__PS2_068__00068

Bact-Vir

KJ025957.1__AHY25315.1__PS2_068__00068

Identity

Accession:
KJ025957 ↗
Kingdom:
phage

Quality

85.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Muldoonvirus› Serratia_phage_PS2

TaxID: 1481112

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-58
PDB
Domain cluster: representative
CATH (79)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ebtA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.86 69.0 5.22e-01 94.8% 38.2%
3hk4A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.82 67.0 5.21e-01 94.8% 43.2%
3f14A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.78 62.0 4.93e-01 94.8% 44.6%
3ff0A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.77 65.0 4.88e-01 94.8% 39.7%
3b8lA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.76 64.0 4.84e-01 94.8% 41.8%
1jkgB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.76 65.0 4.59e-01 96.6% 33.9%
2imjD01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 58.0 4.42e-01 94.8% 35.9%
3cnxA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.73 59.0 4.45e-01 94.8% 37.7%
1jkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.72 60.0 4.61e-01 94.8% 43.9%
3h2gA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.72 61.0 3.92e-01 94.8% 38.0%
3nv0B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 59.0 4.57e-01 94.8% 42.6%
3er7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 57.0 4.54e-01 94.8% 43.1%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.71 62.0 3.73e-01 100.0% 29.8%
4e6fA00 3.30.530.80 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.69 60.0 4.30e-01 96.6% 36.3%
1zhxA03 2.40.160.120 Mainly Beta › Beta Barrel › Porin › 0.69 60.0 4.20e-01 100.0% 42.9%
7c5wA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 54.0 4.08e-01 94.8% 34.5%
5aigA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 55.0 4.34e-01 94.8% 41.1%
1uliB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 56.0 4.05e-01 94.8% 35.0%
2cc3A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.68 58.0 4.34e-01 94.8% 45.8%
1cbyA00 3.40.198.10 Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like 0.67 58.0 3.94e-01 100.0% 82.8%
3h51A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 57.0 4.32e-01 94.8% 91.5%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.67 56.0 4.04e-01 96.6% 39.4%
3hx8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 55.0 4.36e-01 94.8% 46.1%
3gwrB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 56.0 4.38e-01 94.8% 44.1%
4kz1A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.66 56.0 4.28e-01 94.8% 49.6%
2bmoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 53.0 3.82e-01 94.8% 32.0%
3f7sA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 53.0 4.01e-01 94.8% 36.6%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.66 54.0 4.13e-01 98.3% 81.3%
2ckfB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 54.0 3.95e-01 94.8% 34.7%
2f86B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 57.0 4.34e-01 94.8% 45.7%
2jmuA01 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.65 56.0 3.77e-01 94.8% 61.5%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.65 57.0 3.54e-01 100.0% 29.6%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.65 57.0 4.17e-01 98.3% 45.2%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 54.0 4.00e-01 94.8% 37.7%
4e3eA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 45.0 2.85e-01 75.9% 33.9%
2f1xB00 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.64 54.0 4.12e-01 96.6% 62.7%
2bi0A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 44.0 3.31e-01 72.4% 73.5%
3ebyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 52.0 3.95e-01 94.8% 39.2%
2je8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 46.0 3.80e-01 79.3% 64.5%
3butA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 47.0 3.74e-01 81.0% 61.6%
4fekB00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.63 51.0 3.40e-01 91.4% 89.9%
1p1hB01 3.30.2360.10 Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain 0.63 50.0 3.58e-01 87.9% 61.4%
1xo8A00 2.60.40.1820 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 45.0 3.41e-01 77.6% 49.7%
3icyA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.63 52.0 4.12e-01 94.8% 44.9%
4dduA07 2.60.510.20 Mainly Beta › Sandwich › EV matrix protein fold › 0.63 43.0 3.64e-01 74.1% 41.1%
4eg9A00 2.50.20.40 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.62 51.0 3.51e-01 96.6% 29.4%
4eziA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 52.0 3.38e-01 96.6% 41.2%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 53.0 4.20e-01 100.0% 97.7%
6hswA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 52.0 3.12e-01 94.8% 24.7%
2chcC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 51.0 3.77e-01 94.8% 36.5%
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 43.0 3.90e-01 74.1% 54.9%
1qhlA00 3.40.1140.10 Alpha Beta › 3-Layer(aba) Sandwich › N-terminal domain of mukB › 0.62 53.0 3.62e-01 96.6% 68.5%
3kh8B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.61 53.0 3.94e-01 98.3% 86.4%
3n91A02 2.40.128.420 Mainly Beta › Beta Barrel › Lipocalin › 0.61 52.0 4.02e-01 98.3% 69.1%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.61 49.0 3.85e-01 94.8% 44.9%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 50.0 4.15e-01 93.1% 83.8%
1qy9A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.60 53.0 3.86e-01 100.0% 69.3%
6rupA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 47.0 3.84e-01 87.9% 82.0%
5i4nA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 48.0 4.22e-01 94.8% 89.1%
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 50.0 4.02e-01 93.1% 73.0%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 46.0 4.15e-01 94.8% 61.9%
4gn2A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 47.0 3.13e-01 89.7% 26.2%
4ncbA01 3.30.530.60 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.58 40.0 3.00e-01 74.1% 28.8%
4bj8K00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.58 44.0 3.62e-01 94.8% 42.5%
1h2iA01 3.30.390.80 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 0.58 47.0 3.62e-01 94.8% 45.9%
1mdaH00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 46.0 2.93e-01 98.3% 19.8%
4n4rB00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.57 50.0 3.70e-01 100.0% 67.5%
3rnsA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 41.0 3.42e-01 77.6% 87.0%
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 45.0 3.35e-01 91.4% 42.9%
3rnsA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 41.0 3.42e-01 81.0% 80.6%
5vqjA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.55 45.0 3.13e-01 94.8% 32.9%
3cygA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.55 45.0 3.67e-01 96.6% 82.4%
1pfoA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.55 38.0 3.88e-01 74.1% 81.1%
5tseA00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.55 42.0 3.33e-01 87.9% 57.4%
4ybnB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 42.0 2.96e-01 91.4% 65.9%
1ae2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 41.0 3.70e-01 87.9% 89.5%
3n0aA02 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 46.0 3.47e-01 94.8% 72.6%
3vhxF00 2.60.40.4330 Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain 0.53 42.0 3.63e-01 94.8% 73.5%
6oziB00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.50 42.0 2.79e-01 93.1% 28.2%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3281821 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.82 65.0 4.98e-01 94.8% 38.5%
3282929 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.82 65.0 5.08e-01 94.8% 41.7%
2388320 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.82 65.0 4.93e-01 94.8% 37.9%
3721835 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.82 70.0 5.09e-01 94.8% 88.9%
3957839 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.82 64.0 4.92e-01 94.8% 38.5%
169507 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.78 62.0 4.92e-01 94.8% 44.6%
3829053 243.1.1.49 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF2358 0.77 66.0 4.89e-01 94.8% 38.6%
3242736 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.77 66.0 4.94e-01 94.8% 41.4%
169776 243.1.1.4 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PHZA_PHZB 0.77 65.0 4.69e-01 94.8% 34.6%
3969379 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.77 65.0 4.80e-01 94.8% 37.3%
6410 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.76 64.0 4.82e-01 94.8% 41.0%
3960172 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.76 63.0 5.06e-01 94.8% 46.6%
3559952 71.2.1.4 ↗ beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.75 62.0 4.08e-01 91.4% 25.8%
3278990 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.75 64.0 4.69e-01 96.6% 36.7%
4978484 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.74 58.0 4.48e-01 94.8% 38.5%
3581448 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.74 61.0 4.97e-01 94.8% 52.2%
5072383 243.1.1.26 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.73 61.0 4.61e-01 94.8% 40.7%
3458037 243.3.1.19 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.73 63.0 4.46e-01 96.6% 49.1%
3950026 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.72 61.0 4.67e-01 94.8% 44.0%
5083024 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.72 62.0 3.71e-01 98.3% 13.7%
4986251 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.71 58.0 4.96e-01 91.4% 56.7%
3966214 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.70 60.0 3.67e-01 100.0% 36.8%
3258377 331.23.1.0 ↗ a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain 0.70 57.0 4.90e-01 96.6% 56.7%
3192331 7579.1.1.6 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.70 60.0 3.52e-01 94.8% 21.9%
3744079 243.1.1.18 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.70 54.0 4.26e-01 94.8% 40.0%
3941717 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.70 59.0 5.13e-01 94.8% 85.2%
3632708 7579.1.1.6 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.69 58.0 3.45e-01 93.1% 21.8%
3962922 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.69 57.0 4.18e-01 94.8% 37.6%
3729387 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.68 57.0 4.68e-01 94.8% 55.5%
3967916 243.1.1.25 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.68 56.0 4.27e-01 94.8% 39.2%
3504070 243.1.1.13 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › CaMKII_AD 0.68 58.0 4.35e-01 94.8% 40.7%
3693958 331.3.1.17 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt 0.68 57.0 3.85e-01 94.8% 26.5%
1562283 243.1.1.11 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › LEH 0.68 56.0 4.36e-01 94.8% 41.9%
3702051 1116.1.1.0 ↗ a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain 0.67 58.0 4.07e-01 100.0% 74.0%
3479831 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.67 57.0 4.14e-01 94.8% 36.4%
134734 243.1.1.13 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › CaMKII_AD 0.67 57.0 4.32e-01 94.8% 91.5%
3725346 243.1.1.25 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.67 56.0 4.38e-01 94.8% 45.4%
3848773 243.1.1.13 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › CaMKII_AD 0.67 59.0 4.31e-01 100.0% 94.5%
3209908 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 58.0 3.51e-01 100.0% 67.3%
4933294 230.1.1.5 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.66 50.0 3.93e-01 81.0% 84.0%
3482138 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 58.0 3.26e-01 100.0% 22.2%
3969465 6043.1.1.0 ↗ a+b two layers › yfeY-like › yfeY-like › yfeY-like 0.66 55.0 4.91e-01 89.7% 67.5%
3496522 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 58.0 3.40e-01 100.0% 32.1%
3685395 243.1.1.10 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL 0.66 55.0 4.28e-01 94.8% 43.8%
4969760 230.1.1.5 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.65 47.0 3.68e-01 77.6% 72.3%
3586630 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.65 54.0 3.50e-01 100.0% 39.3%
3770163 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 49.0 4.10e-01 81.0% 64.0%
3587340 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 54.0 4.79e-01 94.8% 71.8%
3284807 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.65 52.0 4.11e-01 94.8% 45.2%
2527953 5.1.2.10 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF1861 0.65 55.0 3.53e-01 98.3% 78.9%
3621147 5.1.4.166 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_DCAF4 0.64 56.0 3.43e-01 100.0% 34.2%
4951151 5.1.4.40 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.64 56.0 3.49e-01 100.0% 26.2%
3282685 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.64 51.0 4.17e-01 93.1% 50.0%
4993562 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.64 44.0 3.68e-01 86.2% 40.0%
3214793 5.1.4.166 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_DCAF4 0.64 55.0 3.37e-01 100.0% 33.4%
5063899 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 53.0 3.54e-01 91.4% 25.5%
2033779 243.1.1.28 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.63 50.0 4.04e-01 93.1% 46.5%
5013525 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.63 50.0 3.98e-01 91.4% 41.6%
2035523 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.63 53.0 4.25e-01 93.1% 78.6%
3722444 243.1.1.25 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_3 0.63 51.0 3.75e-01 96.6% 86.7%
3608162 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.63 52.0 3.81e-01 93.1% 35.8%
3595257 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.62 54.0 3.46e-01 100.0% 44.5%
5049047 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.62 49.0 4.05e-01 96.6% 44.0%
3933078 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 56.0 3.11e-01 100.0% 13.1%
3972305 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 43.0 3.72e-01 74.1% 98.9%
4680392 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.61 51.0 4.15e-01 93.1% 75.5%
224067 6098.1.1.1 ↗ a+b two layers › BACOVA_05496-like › BACOVA_05496-like › BACOVA_05496-like › DUF4738 0.61 49.0 3.85e-01 94.8% 44.9%
3966429 1.1.13.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.61 42.0 3.68e-01 74.1% 98.9%
None — 0.60 45.0 3.42e-01 79.3% 35.4%
4023765 210.1.1.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.60 50.0 3.41e-01 93.1% 56.4%
3737341 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.60 44.0 3.52e-01 82.8% 82.3%
3512269 79.1.1.16 ↗ beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › DUF1983 0.60 50.0 4.37e-01 98.3% 61.1%
5056888 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 46.0 4.43e-01 94.8% 77.0%
3698492 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.59 51.0 3.97e-01 96.6% 55.2%
3703231 216.1.1.2 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C 0.59 48.0 3.59e-01 93.1% 36.4%
4341158 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.59 51.0 3.73e-01 98.3% 47.9%
3995685 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.59 46.0 3.83e-01 87.9% 81.7%
3226910 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.59 48.0 3.22e-01 91.4% 23.2%
3788663 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.59 51.0 3.37e-01 98.3% 41.6%
3873771 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.58 43.0 3.50e-01 79.3% 41.8%
3634241 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.58 42.0 3.87e-01 79.3% 67.5%
3264178 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.57 42.0 3.13e-01 77.6% 32.9%
4393593 1.1.13.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.57 47.0 3.96e-01 89.7% 100.0%
5045780 247.1.1.12 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 0.55 42.0 2.92e-01 89.7% 21.8%
3562593 4026.1.1.1 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › Rap-GAP_dimer 0.55 43.0 3.33e-01 96.6% 35.6%
1758564 69.1.1.2 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint 0.54 45.0 3.21e-01 93.1% 47.7%
3174953 69.1.1.2 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint 0.54 44.0 3.00e-01 93.1% 35.8%
3716903 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 42.0 2.64e-01 91.4% 37.8%
4344452 223.3.1.3 ↗ a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.53 43.0 2.97e-01 100.0% 42.9%
4929184 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 37.0 2.92e-01 86.2% 81.3%
D2 medium residues 59-109
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a8rA01 1.10.286.10 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain 0.78 66.0 5.67e-01 98.0% 68.2%
2w43A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.76 58.0 5.61e-01 82.4% 73.7%
2no4A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.76 63.0 5.48e-01 90.2% 61.3%
3ermB00 1.10.10.710 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PSPTO_1197 like 0.75 57.0 5.27e-01 82.4% 68.8%
3umbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.75 61.0 5.26e-01 90.2% 63.3%
2ebmA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.74 58.0 4.38e-01 88.2% 38.3%
1rp3A01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.72 57.0 4.91e-01 94.1% 55.3%
2qgsB01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.71 53.0 4.46e-01 84.3% 47.7%
1is8A01 1.10.286.10 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain 0.70 59.0 5.70e-01 100.0% 91.7%
4uqfG01 1.10.286.10 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain 0.70 56.0 5.65e-01 92.2% 96.2%
3u5nA02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.69 56.0 4.28e-01 90.2% 56.7%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.69 52.0 4.07e-01 82.4% 37.5%
7ymiZ01 1.10.287.740 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre 0.67 48.0 4.67e-01 76.5% 74.1%
5je8B02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.67 46.0 3.46e-01 72.5% 32.8%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.67 49.0 4.23e-01 78.4% 53.1%
3vm9A02 6.10.140.2110 Special › Helix non-globular › Helix Hairpins › 0.67 56.0 5.48e-01 100.0% 94.7%
4akgA08 1.10.472.130 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain 0.66 55.0 4.00e-01 98.0% 32.7%
1sg7A00 1.10.1740.70 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB 0.65 55.0 4.89e-01 98.0% 76.0%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.65 51.0 4.84e-01 84.3% 76.7%
3k2jA00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.64 46.0 3.62e-01 80.4% 50.4%
1u5eA01 6.10.250.220 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.64 45.0 4.45e-01 78.4% 71.7%
3b0cW00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.64 47.0 4.21e-01 80.4% 56.2%
1ks9A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.63 48.0 3.80e-01 100.0% 37.4%
3l9fA02 6.10.140.1570 Special › Helix non-globular › Helix Hairpins › 0.63 46.0 3.93e-01 78.4% 48.1%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.63 55.0 4.30e-01 100.0% 51.4%
2klqA00 1.20.58.870 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 47.0 3.82e-01 92.2% 39.5%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.62 53.0 4.98e-01 100.0% 76.9%
4l8jA04 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.62 47.0 4.50e-01 82.4% 76.3%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.61 48.0 4.28e-01 84.3% 60.6%
3b5iA02 1.10.1200.220 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › 0.61 53.0 4.40e-01 100.0% 56.8%
3zdmB00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.61 44.0 4.50e-01 78.4% 86.0%
4gouA03 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.60 49.0 3.40e-01 96.1% 80.2%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.59 46.0 4.13e-01 82.4% 63.4%
2rreA00 1.10.10.2010 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.59 50.0 4.47e-01 96.1% 70.3%
2kmfA01 1.20.58.810 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 0.59 49.0 3.98e-01 94.1% 97.1%
2bg1A01 3.90.1310.40 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › 0.58 45.0 4.00e-01 86.3% 72.7%
1blwC00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.58 46.0 3.44e-01 90.2% 66.0%
4gf0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 49.0 3.84e-01 100.0% 44.2%
2yevA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 44.0 3.90e-01 82.4% 58.1%
1gvfB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 44.0 2.97e-01 100.0% 25.1%
2kvsA00 1.10.150.260 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › YozE SAM-like 0.57 41.0 3.58e-01 76.5% 48.8%
5fb0A02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.56 49.0 3.76e-01 96.1% 93.8%
2lefA00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.56 50.0 4.19e-01 100.0% 74.4%
1a3qA01 2.60.40.340 Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain 0.56 45.0 3.21e-01 94.1% 29.1%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.56 45.0 4.28e-01 90.2% 90.2%
1zbtA01 6.10.140.1950 Special › Helix non-globular › Helix Hairpins › 0.56 47.0 4.05e-01 98.0% 94.0%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.55 48.0 3.51e-01 100.0% 35.2%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.55 49.0 3.81e-01 100.0% 73.6%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.54 47.0 4.35e-01 100.0% 92.5%
2yqdA00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.54 42.0 3.35e-01 90.2% 55.8%
2kz5A00 1.10.880.10 Mainly Alpha › Orthogonal Bundle › Transcription Factor Skn-1; Chain P › Transcription factor, Skn-1-like, DNA-binding domain 0.51 44.0 3.64e-01 98.0% 64.8%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4890943 148.1.3.28 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_11 0.84 67.0 4.46e-01 86.3% 96.7%
3297054 103.4.1.0 ↗ alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.82 68.0 6.27e-01 90.2% 70.8%
3270778 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.82 70.0 5.58e-01 96.1% 57.0%
3651471 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.80 69.0 4.25e-01 96.1% 30.5%
3926367 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.79 70.0 4.29e-01 98.0% 32.2%
3164721 1078.1.1.0 ↗ extended segments › Bd-type quinol oxidase transmembrane helix subunit › Bd-type quinol oxidase transmembrane helix subunit › Bd-type quinol oxidase transmembrane helix subunit 0.79 69.0 5.76e-01 100.0% 67.8%
4232288 4275.1.1.10 ↗ alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › NifW 0.77 60.0 5.38e-01 86.3% 61.4%
3935681 3664.1.1.0 ↗ alpha arrays › Small, acid-soluble spore protein C › Small, acid-soluble spore protein C › Small, acid-soluble spore protein C 0.74 61.0 6.21e-01 90.2% 100.0%
3610493 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.74 59.0 5.02e-01 86.3% 55.0%
4503918 140.1.1.11 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 0.74 62.0 4.11e-01 100.0% 29.7%
3643488 192.15.1.11 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › CemA 0.73 64.0 5.65e-01 100.0% 73.3%
3350634 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.73 62.0 3.94e-01 100.0% 31.9%
3255820 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.73 63.0 3.89e-01 98.0% 29.3%
3897328 2003.1.5.111 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Rsm22 0.73 64.0 3.87e-01 100.0% 59.4%
185221 3502.1.1.1 ↗ alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein › YebG 0.73 56.0 5.12e-01 84.3% 67.2%
5036318 140.1.1.11 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 0.72 60.0 4.07e-01 100.0% 34.7%
4506168 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.72 59.0 4.52e-01 94.1% 39.2%
3948958 1049.2.1.0 ↗ alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain 0.72 64.0 5.05e-01 100.0% 53.3%
4346135 3921.1.1.0 ↗ alpha complex topology › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D 0.71 59.0 4.17e-01 100.0% 28.9%
3481034 4009.1.1.0 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.71 58.0 5.10e-01 94.1% 71.2%
3970007 3502.1.1.0 ↗ alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein 0.71 53.0 4.71e-01 82.4% 58.7%
3260418 5043.1.1.0 ↗ extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like 0.70 58.0 5.50e-01 100.0% 84.6%
3392913 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.70 58.0 3.71e-01 100.0% 29.4%
4239812 2004.1.1.105 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinase-PPPase 0.70 54.0 3.87e-01 86.3% 29.7%
4376234 4070.1.1.2 ↗ alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 0.70 60.0 3.87e-01 100.0% 20.8%
3703277 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.69 46.0 4.08e-01 100.0% 50.0%
4980598 140.1.1.0 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.69 57.0 3.86e-01 100.0% 30.9%
4067861 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.69 53.0 4.59e-01 94.1% 52.9%
3518379 3502.1.1.1 ↗ alpha bundles › uncharacterized conserved protein › uncharacterized conserved protein › uncharacterized conserved protein › YebG 0.68 50.0 4.97e-01 82.4% 80.0%
3709879 181.1.1.0 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.67 54.0 4.89e-01 100.0% 65.3%
3705250 708.1.1.0 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.67 52.0 3.57e-01 98.0% 23.9%
3285244 5063.1.1.19 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › DUF2277 0.66 51.0 5.31e-01 86.3% 100.0%
4970553 3542.1.1.1 ↗ alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin 0.66 53.0 3.42e-01 98.0% 90.5%
4009384 1075.3.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 0.64 54.0 3.63e-01 100.0% 23.2%
4647835 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.62 47.0 3.04e-01 82.4% 24.8%
3840190 633.10.1.18 ↗ alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › THU_Piezo1 0.62 50.0 3.90e-01 88.2% 51.8%
3455413 633.1.1.1 ↗ alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain 0.60 43.0 3.36e-01 80.4% 54.4%
3956103 5056.1.1.4 ↗ extended segments › Gated mechanosensitive channel › Gated mechanosensitive channel › Gated mechanosensitive channel › RDD 0.59 52.0 3.83e-01 100.0% 37.8%
4565383 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.59 48.0 4.84e-01 98.0% 90.0%
5038847 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.58 51.0 4.62e-01 100.0% 81.4%
4544002 192.6.1.1 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE 0.56 46.0 4.68e-01 100.0% 92.0%
5053090 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.55 48.0 4.59e-01 100.0% 83.3%
4213046 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.54 48.0 4.44e-01 100.0% 86.2%
3971539 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.53 46.0 4.10e-01 100.0% 81.3%
3947564 605.1.1.4 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 0.52 43.0 4.07e-01 98.0% 96.9%