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KJ094023.1__AHL18824.1__LP101_045__00045

Bact-Vir

KJ094023.1__AHL18824.1__LP101_045__00045

Identity

Accession:
KJ094023 ↗
Kingdom:
phage

Quality

79.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Slepowronvirus› Listeria_phage_LP-101

TaxID: 1458856

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-70
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 51.0 5.19e-01 100.0% 67.6%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 56.0 5.88e-01 100.0% 82.3%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 51.0 5.41e-01 100.0% 77.4%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 49.0 5.32e-01 100.0% 79.7%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.70 49.0 5.18e-01 100.0% 84.7%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 4.48e-01 100.0% 68.1%
4p5nA00 2.30.30.1060 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 4.83e-01 100.0% 74.3%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 52.0 5.33e-01 100.0% 89.4%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 43.0 4.18e-01 91.3% 64.1%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 50.0 5.15e-01 100.0% 89.6%
7z0kB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 47.0 4.93e-01 100.0% 90.6%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 38.0 3.90e-01 94.2% 70.1%
2epbA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 43.0 4.34e-01 88.4% 82.4%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.54 43.0 3.51e-01 100.0% 45.5%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 44.0 2.78e-01 97.1% 37.1%
3htnB00 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.52 44.0 3.45e-01 100.0% 45.3%
6toaE01 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.52 45.0 4.09e-01 100.0% 75.5%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.52 41.0 3.77e-01 88.4% 89.5%
3pyfA01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.50 43.0 3.38e-01 100.0% 86.8%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.50 38.0 3.59e-01 100.0% 66.3%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2674741 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.73 47.0 5.18e-01 98.6% 83.6%
5048974 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 55.0 4.64e-01 100.0% 51.8%
5061147 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 57.0 5.09e-01 100.0% 63.2%
3854881 3769.1.1.0 ↗ 0.70 43.0 4.47e-01 100.0% 66.2%
3232054 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 49.0 4.25e-01 100.0% 50.0%
5052256 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 54.0 4.80e-01 100.0% 60.0%
4968862 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 43.0 5.09e-01 94.2% 100.0%
2157301 4.1.1.78 ↗ beta barrels › SH3 › SH3 › SH3 › TTD 0.66 52.0 5.09e-01 100.0% 78.1%
4564083 1.1.9.5 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg 0.61 44.0 3.08e-01 82.6% 22.5%
4386715 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.58 54.0 5.04e-01 100.0% 85.9%
4879695 1.1.13.29 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_gp28 0.58 50.0 4.12e-01 100.0% 86.4%
3907178 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 51.0 4.45e-01 100.0% 76.2%
3770802 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.57 52.0 4.57e-01 100.0% 75.2%
3842361 1.1.5.76 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT 0.57 52.0 4.64e-01 100.0% 73.7%
3304525 4.1.1.173 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4216 0.56 51.0 4.35e-01 100.0% 79.1%
3495713 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 50.0 3.58e-01 100.0% 43.5%
3530890 2004.1.1.402 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CABIT 0.55 50.0 4.59e-01 100.0% 83.0%
3991065 4.1.1.334 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.55 51.0 4.83e-01 100.0% 86.3%
3397439 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 43.0 3.61e-01 95.7% 48.0%
3492087 219.1.1.4 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.55 49.0 3.11e-01 100.0% 29.4%
4667221 2003.1.2.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2,Pyr_redox_2 0.54 46.0 3.37e-01 97.1% 57.7%
4997059 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.53 40.0 3.96e-01 100.0% 74.7%
3677761 4111.1.1.2 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.52 43.0 3.50e-01 100.0% 49.6%
3862288 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.51 40.0 2.60e-01 88.4% 80.8%
5025236 4111.1.1.2 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.51 42.0 3.42e-01 100.0% 48.8%
3700747 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 43.0 4.00e-01 100.0% 90.0%
5041169 4111.1.1.2 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.50 44.0 3.45e-01 100.0% 47.1%
5069801 4111.1.1.2 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.50 43.0 3.40e-01 100.0% 46.4%
3952939 220.1.1.82 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.50 39.0 3.82e-01 98.6% 80.0%