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KJ159566.1__AHJ88646.1__GBK2_48__00048

Bact-Vir

KJ159566.1__AHJ88646.1__GBK2_48__00048

Identity

Accession:
KJ159566 ↗
Kingdom:
phage

Quality

77.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Geobacillus_phage_GBK2

TaxID: 1458842

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-56
PDB
D2 medium residues 57-141
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08858.16 best IDEAL 23.7 4.30e-05 23.5% 48.6%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.74 52.0 4.70e-01 71.8% 62.4%
2p4pA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.64 30.0 3.02e-01 71.8% 42.9%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 44.0 4.46e-01 70.6% 75.9%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 48.0 4.04e-01 80.0% 73.0%
4g09A03 1.20.5.1300 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.63 36.0 4.31e-01 97.6% 87.3%
1kaeA03 1.20.5.1300 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.62 35.0 4.32e-01 97.6% 87.3%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 47.0 4.56e-01 80.0% 83.3%
2rhiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 44.0 4.03e-01 74.1% 72.3%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 3.96e-01 80.0% 79.5%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.54 44.0 3.29e-01 88.2% 47.7%
2hroA02 1.10.274.10 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain 0.52 29.0 2.61e-01 94.1% 35.9%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4952887 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 47.0 5.71e-01 77.6% 100.0%
552 4.1.1.61 ↗ beta barrels › SH3 › SH3 › SH3 › KapB 0.74 52.0 4.70e-01 71.8% 62.4%
5022491 4.1.1.182 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2097 0.66 45.0 4.58e-01 70.6% 82.4%
4348606 4.1.1.440 ↗ beta barrels › SH3 › SH3 › SH3 › PF27165 0.65 46.0 5.21e-01 80.0% 96.9%
5055961 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 48.0 5.00e-01 80.0% 90.0%
3625264 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 49.0 4.74e-01 82.4% 94.7%
4466506 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 45.0 4.72e-01 74.1% 94.7%
3576940 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 51.0 3.74e-01 88.2% 42.2%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 45.0 4.53e-01 76.5% 84.7%
3719783 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 48.0 4.70e-01 84.7% 96.8%
4536562 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 49.0 5.19e-01 98.8% 97.3%
4220126 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.61 48.0 4.86e-01 84.7% 90.6%
4979962 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 41.0 4.58e-01 92.9% 92.3%
3795384 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 54.0 3.95e-01 98.8% 44.7%
3789647 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 52.0 4.27e-01 98.8% 65.2%
3629316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 52.0 4.94e-01 98.8% 96.0%
3996279 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.56 45.0 4.62e-01 84.7% 98.8%
3303863 5.1.3.65 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.52 38.0 2.54e-01 76.5% 97.7%
3948255 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 43.0 3.79e-01 91.8% 88.5%
3240591 2484.1.1.43 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.51 39.0 2.83e-01 82.4% 71.6%