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KJ192399.2__AHK11884.1__CHOED_024__00024
Bact-VirKJ192399.2__AHK11884.1__CHOED_024__00024
Identity
- Accession:
- KJ192399 ↗
- Kingdom:
- phage
Quality
92.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-59
Domain cluster:
rep: KY499642.1__AQT28023.1__pVa21_082__00082__D3-66
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.78 | 63.0 | 6.36e-01 | 100.0% | 89.8% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.69 | 59.0 | 5.47e-01 | 100.0% | 76.0% |
| 3b79A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.66 | 51.0 | 4.05e-01 | 100.0% | 40.0% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.66 | 49.0 | 3.92e-01 | 82.8% | 77.2% |
| 4b6mB00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.65 | 56.0 | 5.09e-01 | 100.0% | 87.3% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 51.0 | 4.99e-01 | 98.3% | 81.8% |
| 2iw3A05 | 2.40.50.990 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 51.0 | 4.25e-01 | 93.1% | 63.3% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 49.0 | 4.87e-01 | 98.3% | 84.1% |
| 4by6B00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.62 | 52.0 | 3.79e-01 | 94.8% | 33.7% |
| 4l22A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.62 | 47.0 | 2.86e-01 | 84.5% | 29.9% |
| 3vueA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.61 | 43.0 | 2.87e-01 | 87.9% | 16.2% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 45.0 | 4.64e-01 | 91.4% | 85.7% |
| 7prrB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 43.0 | 3.19e-01 | 81.0% | 99.4% |
| 1x49A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 44.0 | 4.22e-01 | 82.8% | 82.9% |
| 2hx0A01 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.59 | 52.0 | 3.98e-01 | 100.0% | 47.7% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 45.0 | 3.86e-01 | 84.5% | 62.8% |
| 1o5yA00 | 3.10.690.10 | Alpha Beta › Roll › Bifunctional nuclease domain › Bifunctional nuclease domain | 0.58 | 46.0 | 3.59e-01 | 93.1% | 42.0% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.58 | 43.0 | 4.27e-01 | 82.8% | 79.4% |
| 4hasA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 50.0 | 4.16e-01 | 100.0% | 81.7% |
| 2l73A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 43.0 | 3.34e-01 | 84.5% | 70.6% |
| 5c7qB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.56 | 39.0 | 2.85e-01 | 75.9% | 65.6% |
| 2bz0A00 | 3.40.50.10990 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II | 0.56 | 46.0 | 3.38e-01 | 94.8% | 79.8% |
| 2dchX02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.55 | 44.0 | 3.64e-01 | 91.4% | 74.8% |
| 1qlmA02 | 3.30.1030.10 | Alpha Beta › 2-Layer Sandwich › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 2 | 0.55 | 45.0 | 3.15e-01 | 91.4% | 51.5% |
| 3k59A01 | 2.40.50.590 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel | 0.54 | 41.0 | 3.78e-01 | 89.7% | 91.8% |
| 3dxpA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 43.0 | 3.74e-01 | 91.4% | 91.4% |
| 1e69A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 36.0 | 2.40e-01 | 70.7% | 98.5% |
| 3bdiA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 38.0 | 2.68e-01 | 77.6% | 92.8% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 40.0 | 3.82e-01 | 86.2% | 81.7% |
| 3ilvA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.52 | 45.0 | 2.98e-01 | 100.0% | 66.4% |
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 38.0 | 3.61e-01 | 82.8% | 92.0% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 39.0 | 3.25e-01 | 91.4% | 84.6% |
| 2n3gA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 39.0 | 3.68e-01 | 84.5% | 83.3% |
| 1tm0A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.51 | 41.0 | 3.15e-01 | 100.0% | 87.2% |
| 2o62A01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 43.0 | 3.41e-01 | 100.0% | 89.3% |
| 4c89C00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 42.0 | 2.70e-01 | 100.0% | 76.1% |
| 2lttA00 | 2.30.31.70 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.51 | 38.0 | 3.58e-01 | 84.5% | 67.6% |
| 3ro6C01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 38.0 | 3.19e-01 | 82.8% | 53.8% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 39.0 | 3.18e-01 | 87.9% | 87.7% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.50 | 37.0 | 2.87e-01 | 82.8% | 38.4% |
| 1of5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 39.0 | 3.04e-01 | 93.1% | 70.8% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.50 | 43.0 | 3.32e-01 | 100.0% | 85.7% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3990293 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.75 | 57.0 | 5.82e-01 | 84.5% | 85.5% |
| 3995759 | 4.1.1.284 ↗ | beta barrels › SH3 › SH3 › SH3 › SBNO | 0.70 | 60.0 | 4.85e-01 | 100.0% | 50.0% |
| 4929550 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.69 | 57.0 | 5.41e-01 | 98.3% | 77.1% |
| 3257603 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.68 | 52.0 | 4.13e-01 | 84.5% | 73.3% |
| 3198252 | 1.1.17.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S64 | 0.67 | 59.0 | 4.20e-01 | 100.0% | 33.5% |
| 5002178 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.67 | 45.0 | 4.78e-01 | 75.9% | 82.0% |
| 3486847 | 4.1.1.284 ↗ | beta barrels › SH3 › SH3 › SH3 › SBNO | 0.67 | 57.0 | 4.79e-01 | 100.0% | 62.9% |
| 4018760 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.66 | 56.0 | 5.17e-01 | 94.8% | 76.0% |
| 3487081 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 57.0 | 4.86e-01 | 100.0% | 66.0% |
| 4186556 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 58.0 | 4.71e-01 | 98.3% | 80.9% |
| 4958640 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.66 | 53.0 | 3.81e-01 | 89.7% | 87.9% |
| 3401098 | 4.1.1.284 ↗ | beta barrels › SH3 › SH3 › SH3 › SBNO | 0.66 | 57.0 | 4.51e-01 | 100.0% | 49.6% |
| 3787284 | 708.1.2.3 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › Yippee-Mis18 | 0.64 | 49.0 | 4.13e-01 | 86.2% | 74.3% |
| 2116605 | 206.1.1.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase | 0.64 | 49.0 | 3.10e-01 | 84.5% | 34.8% |
| 4045121 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.62 | 47.0 | 4.35e-01 | 86.2% | 82.5% |
| 4891173 | 206.1.1.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase,FATC | 0.62 | 49.0 | 3.26e-01 | 89.7% | 41.5% |
| 3588750 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.62 | 49.0 | 4.57e-01 | 91.4% | 86.7% |
| 3365937 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.62 | 46.0 | 4.59e-01 | 81.0% | 85.0% |
| 4213053 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 51.0 | 4.40e-01 | 94.8% | 93.7% |
| 3789008 | 1.1.5.85 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S64 | 0.61 | 53.0 | 3.33e-01 | 100.0% | 18.7% |
| 3867421 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 52.0 | 3.44e-01 | 100.0% | 35.6% |
| 4493573 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.60 | 50.0 | 3.57e-01 | 100.0% | 51.0% |
| 3904250 | 6.1.1.15 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ins145_P3_rec | 0.60 | 41.0 | 3.51e-01 | 74.1% | 41.9% |
| 3253268 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.60 | 50.0 | 3.63e-01 | 98.3% | 32.6% |
| 4483150 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.59 | 46.0 | 3.45e-01 | 87.9% | 67.5% |
| 5041400 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 43.0 | 4.59e-01 | 79.3% | 100.0% |
| 3373105 | 4.1.1.309 ↗ | beta barrels › SH3 › SH3 › SH3 › MRP-S34 | 0.59 | 50.0 | 4.60e-01 | 100.0% | 73.8% |
| 3471363 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.59 | 49.0 | 3.59e-01 | 100.0% | 32.6% |
| 5050089 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.59 | 42.0 | 2.81e-01 | 79.3% | 35.6% |
| 5022763 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 42.0 | 2.71e-01 | 79.3% | 56.6% |
| 4875314 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.58 | 44.0 | 3.61e-01 | 100.0% | 41.7% |
| 3626321 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.58 | 43.0 | 4.46e-01 | 82.8% | 90.9% |
| 3787501 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.58 | 44.0 | 3.48e-01 | 87.9% | 86.4% |
| 3368743 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.58 | 45.0 | 4.52e-01 | 89.7% | 98.3% |
| 3740784 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 49.0 | 4.41e-01 | 100.0% | 74.1% |
| 3988061 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 43.0 | 3.64e-01 | 86.2% | 62.7% |
| 3718687 | 220.1.1.175 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_31 | 0.57 | 47.0 | 3.66e-01 | 100.0% | 70.7% |
| 4931302 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.57 | 41.0 | 4.34e-01 | 84.5% | 92.0% |
| 4931409 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 48.0 | 3.80e-01 | 100.0% | 74.6% |
| 5033471 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.56 | 48.0 | 4.04e-01 | 100.0% | 90.5% |
| 3952896 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.55 | 45.0 | 3.53e-01 | 89.7% | 74.2% |
| 2132960 | 2.2.1.4 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Pertussis_S2S3 | 0.55 | 44.0 | 3.66e-01 | 93.1% | 90.4% |
| 5064060 | 896.1.1.4 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › DDE_Tnp_IS66 | 0.54 | 42.0 | 4.08e-01 | 93.1% | 87.1% |
| 5044978 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.53 | 38.0 | 3.59e-01 | 79.3% | 65.3% |
| 4978676 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.53 | 35.0 | 3.25e-01 | 82.8% | 51.2% |
| 3307236 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 39.0 | 3.23e-01 | 84.5% | 90.0% |
| 3231216 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 38.0 | 4.04e-01 | 94.8% | 96.0% |
| 4982659 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.52 | 37.0 | 2.36e-01 | 79.3% | 37.1% |
| 3936609 | 5.1.3.176 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › APEH_N | 0.52 | 40.0 | 2.48e-01 | 91.4% | 23.1% |
| 3921641 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 3.38e-01 | 93.1% | 84.0% |
| 4471701 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.51 | 35.0 | 2.87e-01 | 74.1% | 97.6% |
| 5026243 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.51 | 41.0 | 2.76e-01 | 98.3% | 76.9% |
| 3427602 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.51 | 43.0 | 2.78e-01 | 100.0% | 80.3% |
| 3174327 | 4.1.1.41 ↗ | beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C | 0.51 | 41.0 | 2.96e-01 | 100.0% | 28.7% |
| 3439915 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.50 | 41.0 | 2.73e-01 | 100.0% | 50.5% |
| 3221575 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.50 | 43.0 | 2.71e-01 | 96.6% | 44.3% |