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KJ192399.2AHK11893.1CHOED_033__00033

Bact-Vir

KJ192399.2__AHK11893.1__CHOED_033__00033

Identity

Accession:: KJ192399 ↗
Kingdom:: phage

Quality

80.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_CHOED

TaxID: 1458716

Cluster

View cluster (41 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-43_70-87_111-130

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1uz3B00	1.10.1240.40	Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › ENT domain	0.53	34.0	3.13e-01	87.8%	49.5%
1vmiA01	3.40.50.10950	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.50	40.0	3.17e-01	91.9%	72.7%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4094445	148.1.3.8 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small	0.53	40.0	3.62e-01	82.4%	92.4%
3450454	148.1.3.8 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small	0.52	39.0	3.24e-01	83.8%	76.4%

D2 medium residues 44-69_88-110_131-157

PDB

Domain cluster: representative

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1q8rA00	3.30.1330.70	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Holliday junction resolvase RusA	0.79	72.0	6.16e-01	100.0%	97.5%
3c8lB00	3.30.1330.20	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain	0.63	56.0	4.82e-01	98.7%	95.0%
3zidB00	3.40.50.1440	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain	0.63	57.0	3.67e-01	100.0%	26.9%
4rhaA00	3.30.1330.60	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain	0.60	52.0	4.42e-01	100.0%	95.4%
4b45A02	3.30.1330.20	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain	0.59	52.0	4.50e-01	98.7%	81.4%
1yawB01	3.30.1330.10	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain	0.59	52.0	4.34e-01	100.0%	71.6%
3cb2A02	3.30.1330.20	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain	0.58	51.0	4.66e-01	97.4%	100.0%
2iu4A02	3.30.1180.20	Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2	0.58	52.0	4.14e-01	100.0%	85.4%
1oi2A02	3.30.1180.20	Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2	0.57	51.0	3.98e-01	100.0%	87.0%
2btoB02	3.30.1330.20	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain	0.55	49.0	4.42e-01	98.7%	99.0%
1pf5A00	3.30.1330.40	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like	0.54	48.0	4.05e-01	100.0%	76.9%
1dihA02	3.30.360.10	Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2	0.52	44.0	3.90e-01	92.1%	88.9%
3v3tA02	3.30.1330.150	Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; ›	0.51	44.0	4.08e-01	94.7%	78.9%
1a8lA01	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.50	38.0	3.35e-01	82.9%	98.3%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4156345	301.4.1.1 ↗	a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA	0.76	70.0	5.95e-01	100.0%	97.5%
5083025	301.4.1.1 ↗	a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA › RusA	0.75	70.0	5.82e-01	100.0%	98.4%
4537541	301.4.1.0 ↗	a+b three layers › Bacillus chorismate mutase-like › Holliday junction resolvase RusA › Holliday junction resolvase RusA	0.69	61.0	5.25e-01	98.7%	98.3%
5036541	301.6.1.0 ↗	a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like	0.62	57.0	4.72e-01	100.0%	69.2%
4985154	301.2.1.0 ↗	a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like	0.61	54.0	4.12e-01	100.0%	60.6%
4665405	3008.1.1.2 ↗	a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DUF5915	0.55	43.0	3.89e-01	85.5%	95.2%
3176437	3008.1.1.0 ↗	a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	0.54	43.0	3.73e-01	86.8%	96.7%
3169974	301.6.1.0 ↗	a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like	0.53	47.0	3.77e-01	100.0%	82.6%
4318787	298.1.1.9 ↗	a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DapB_C	0.53	44.0	3.86e-01	92.1%	80.0%
4667968	298.1.1.0 ↗	a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	0.52	43.0	3.89e-01	90.8%	89.5%