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KJ194582.1__AHN84060.1__PBI_HAWKEYE_49__00049

Bact-Vir

KJ194582.1__AHN84060.1__PBI_HAWKEYE_49__00049

Identity

Accession:
KJ194582 ↗
Kingdom:
phage

Quality

75.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-57
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.72 62.0 6.07e-01 100.0% 90.3%
3varA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.71 50.0 3.12e-01 74.5% 95.1%
1b25A02 1.10.569.10 Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 0.71 48.0 3.41e-01 72.7% 32.0%
3ufeA02 1.20.58.1950 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 46.0 4.70e-01 85.5% 71.7%
1wgfA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.66 50.0 5.12e-01 85.5% 86.8%
3swxA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.66 42.0 4.22e-01 94.5% 62.1%
1t07A00 1.10.3880.10 Mainly Alpha › Orthogonal Bundle › YggX-like › Fe(II) trafficking protein YggX 0.66 49.0 4.32e-01 80.0% 55.6%
3mhsB00 1.10.246.140 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › ENY2/SUS1 0.65 49.0 4.17e-01 90.9% 49.5%
1txuA02 1.20.1050.80 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › VPS9 domain 0.65 55.0 4.02e-01 100.0% 46.9%
3aqlA02 1.10.3090.10 Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 0.64 55.0 3.57e-01 100.0% 21.4%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 48.0 4.87e-01 96.4% 82.1%
3f2bA05 6.10.50.10 Special › Helix non-globular › Insulin-like, subunit E › 0.63 42.0 4.37e-01 76.4% 79.2%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.61 45.0 3.28e-01 94.5% 29.3%
4jd9G00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.61 50.0 3.90e-01 100.0% 41.7%
2bbwA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 50.0 3.46e-01 100.0% 40.5%
2w43A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.60 51.0 5.06e-01 96.4% 93.0%
8adnN01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.60 52.0 3.61e-01 100.0% 34.6%
2lhrA00 1.20.58.1270 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 41.0 3.76e-01 83.6% 52.6%
6e5bN00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.59 51.0 3.55e-01 100.0% 34.7%
7jiuA03 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.59 52.0 3.89e-01 100.0% 68.4%
2xb4A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 48.0 3.29e-01 100.0% 35.9%
4bwrA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 43.0 2.53e-01 81.8% 11.1%
6humG01 1.20.120.1200 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ 0.57 42.0 3.00e-01 92.7% 27.5%
2xvtC00 1.10.150.510 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family 0.56 45.0 3.98e-01 94.5% 60.8%
3rjvA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 45.0 3.32e-01 90.9% 62.5%
3f7cA00 1.20.1590.10 Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like 0.55 42.0 2.91e-01 83.6% 23.1%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 35.0 3.53e-01 76.4% 66.1%
3u4qB04 6.10.140.1030 Special › Helix non-globular › Helix Hairpins › 0.54 40.0 3.77e-01 96.4% 63.8%
6gc1A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 46.0 3.19e-01 96.4% 99.0%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 34.0 3.30e-01 76.4% 55.2%
5cwhA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.52 41.0 3.06e-01 90.9% 40.4%
2ymmA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 43.0 4.00e-01 100.0% 76.7%
2ftpA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 42.0 2.68e-01 94.5% 66.0%
3r6nA02 1.20.58.1060 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 38.0 2.75e-01 92.7% 29.0%
7ep1B01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.51 40.0 2.66e-01 96.4% 20.2%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3600217 5054.1.1.0 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels 0.76 58.0 3.75e-01 83.6% 21.6%
3949071 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 66.0 3.86e-01 100.0% 12.4%
4006612 639.2.1.1 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB 0.74 64.0 5.60e-01 100.0% 65.9%
3973839 610.4.1.1 alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY 0.74 65.0 4.79e-01 100.0% 49.3%
4029249 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.72 62.0 3.41e-01 100.0% 7.5%
4009408 639.2.1.1 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB 0.70 60.0 5.70e-01 100.0% 83.8%
4010412 639.2.1.0 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.70 58.0 5.88e-01 100.0% 98.2%
3943035 639.2.1.0 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.69 59.0 5.64e-01 100.0% 86.2%
4009124 639.2.1.5 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › PF27475 0.68 57.0 5.63e-01 100.0% 93.3%
3948672 639.2.1.1 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB 0.68 57.0 5.73e-01 98.2% 100.0%
4019335 4336.2.1.0 alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 0.65 53.0 4.25e-01 90.9% 47.3%
3608416 4336.2.1.0 alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 0.64 43.0 3.79e-01 96.4% 44.7%
4332292 2004.1.1.191 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.64 56.0 3.92e-01 100.0% 77.2%
3738331 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.64 47.0 4.73e-01 85.5% 81.8%
3591325 4336.2.1.0 alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 0.64 43.0 3.70e-01 92.7% 40.8%
1068638 101.35.1.4 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.63 48.0 4.87e-01 96.4% 82.1%
5028356 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.63 49.0 3.81e-01 87.3% 57.6%
4679434 2004.1.1.192 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 0.63 54.0 3.83e-01 100.0% 77.2%
5029322 2004.1.1.192 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 0.63 55.0 3.83e-01 100.0% 81.1%
3262145 2004.1.1.191 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.62 53.0 3.73e-01 100.0% 75.9%
4942322 2004.1.1.191 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.62 54.0 3.74e-01 100.0% 75.1%
5055734 2004.1.1.192 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 0.61 53.0 3.74e-01 100.0% 77.2%
4989422 2004.1.1.192 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 0.61 52.0 3.64e-01 98.2% 74.1%
5067293 2004.1.1.191 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.61 51.0 3.62e-01 100.0% 74.7%
5054523 2004.1.1.192 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 0.61 51.0 3.67e-01 100.0% 79.2%
5058753 2004.1.1.191 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.60 51.0 3.64e-01 100.0% 77.2%
5070046 2004.1.1.191 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.60 50.0 3.57e-01 100.0% 74.6%
5035789 2004.1.1.227 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNMK 0.59 49.0 3.60e-01 100.0% 73.7%
4979616 2004.1.1.191 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.59 49.0 3.54e-01 100.0% 77.2%
4947959 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 49.0 3.51e-01 100.0% 76.1%
4951507 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.59 51.0 3.50e-01 100.0% 43.0%
4929559 2004.1.1.191 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.58 48.0 3.44e-01 100.0% 73.2%
4992012 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.58 46.0 4.52e-01 100.0% 80.0%
3602889 2004.1.1.191 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.58 50.0 3.49e-01 100.0% 70.8%
5038190 2004.1.1.192 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_18 0.57 47.0 3.42e-01 100.0% 78.3%
1086916 109.4.1.109 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 0.57 43.0 3.20e-01 81.8% 37.1%
3873688 206.1.1.7 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase 0.57 47.0 2.91e-01 100.0% 66.8%
4946570 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 46.0 3.30e-01 98.2% 75.3%
5079468 2004.1.1.191 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_17 0.55 45.0 3.28e-01 100.0% 76.8%
3831851 109.4.1.1258 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.54 41.0 2.68e-01 81.8% 34.9%
4951456 210.1.2.0 a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain 0.52 42.0 2.58e-01 100.0% 63.3%
3641056 109.4.1.1256 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.51 39.0 3.31e-01 83.6% 58.9%