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KJ410740.1__AHV82192.1__X__00067

Bact-Vir

KJ410740.1__AHV82192.1__X__00067

Identity

Accession:
KJ410740 ↗
Kingdom:
phage

Quality

66.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-72
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hbxA01 3.40.1810.10 Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box 0.78 70.0 6.25e-01 100.0% 74.6%
1c7uA01 3.40.1810.10 Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box 0.72 61.0 5.76e-01 100.0% 81.0%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.65 55.0 3.92e-01 100.0% 34.7%
2lu1A00 3.30.70.2370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 54.0 4.42e-01 96.1% 51.7%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.64 50.0 4.10e-01 96.1% 66.7%
1yj7B01 3.30.70.1530 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 0.62 39.0 3.57e-01 70.6% 46.5%
1gcbA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 48.0 2.88e-01 88.2% 22.0%
2pw4A00 1.10.3300.10 Mainly Alpha › Orthogonal Bundle › Jann2411-like fold › Jann2411-like domain 0.60 45.0 3.24e-01 86.3% 44.3%
3gkuA03 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.60 53.0 4.76e-01 100.0% 88.7%
2c4kA01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 49.0 3.55e-01 100.0% 49.1%
4twbA01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 51.0 3.71e-01 100.0% 61.8%
5mp7A01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 48.0 3.54e-01 100.0% 51.2%
1u9yA01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 51.0 3.70e-01 100.0% 62.0%
3lrtB01 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 47.0 3.50e-01 98.0% 52.6%
6qdws00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.58 44.0 3.43e-01 80.4% 62.4%
1vdhA01 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.58 46.0 3.53e-01 88.2% 61.2%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 3.46e-01 84.3% 61.7%
3mr0A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 46.0 3.75e-01 94.1% 54.5%
1xttB00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 49.0 3.33e-01 100.0% 44.7%
3lp5A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 48.0 3.17e-01 100.0% 38.8%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 3.48e-01 84.3% 88.3%
2g47A03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.57 47.0 3.17e-01 100.0% 55.9%
1o57A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 47.0 4.28e-01 98.0% 91.7%
5lp7E01 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.57 42.0 2.98e-01 90.2% 56.2%
3gasB02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 39.0 2.77e-01 74.5% 89.9%
4ns4A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 44.0 2.87e-01 92.2% 81.2%
4oycB00 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.55 49.0 4.11e-01 100.0% 91.0%
1a79A01 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.55 40.0 3.23e-01 78.4% 39.0%
3ajvC02 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.55 40.0 3.25e-01 76.5% 41.8%
3ieyB00 3.40.1350.150 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.55 41.0 3.07e-01 100.0% 28.9%
1bd3A00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 45.0 3.02e-01 100.0% 40.2%
2bf1A00 2.170.40.20 Mainly Beta › Beta Complex › HIV Envelope Protein Gp120; Chain G › Human immunodeficiency virus 1, Gp160, envelope glycoprotein 0.54 41.0 2.56e-01 84.3% 17.8%
6j09A02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.54 44.0 3.81e-01 90.2% 59.0%
5xc5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 42.0 3.09e-01 96.1% 47.9%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.53 47.0 4.05e-01 100.0% 75.0%
2zyzC00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.52 39.0 3.12e-01 80.4% 41.7%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.39e-01 92.2% 85.4%
3zqmA00 6.10.140.2160 Special › Helix non-globular › Helix Hairpins › 0.52 37.0 3.55e-01 76.5% 86.4%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 44.0 3.60e-01 98.0% 53.6%
7r5mA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.51 41.0 2.82e-01 100.0% 32.3%
3c6kA01 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.51 39.0 3.35e-01 100.0% 47.9%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.51 38.0 3.51e-01 86.3% 97.2%
3f02B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 41.0 3.42e-01 100.0% 50.0%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 43.0 3.52e-01 98.0% 53.1%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4274656 263.1.1.0 a+b three layers › SRF-like › SRF-like › SRF-like 0.83 69.0 5.04e-01 100.0% 34.3%
2782521 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.82 69.0 6.82e-01 100.0% 89.1%
3781870 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.80 67.0 5.66e-01 100.0% 56.5%
3322159 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.79 68.0 5.29e-01 100.0% 69.6%
3818050 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.78 68.0 5.91e-01 100.0% 66.3%
3318217 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.78 67.0 5.86e-01 100.0% 75.0%
3679276 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.78 67.0 6.33e-01 100.0% 81.0%
3423636 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.77 67.0 5.53e-01 100.0% 55.8%
6784 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.77 68.0 5.74e-01 100.0% 65.9%
3804378 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.76 65.0 5.83e-01 100.0% 69.3%
3641903 263.1.1.0 a+b three layers › SRF-like › SRF-like › SRF-like 0.74 54.0 5.84e-01 78.4% 100.0%
3996344 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.74 56.0 5.32e-01 82.4% 70.0%
3661638 263.1.1.1 a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF 0.73 60.0 4.93e-01 92.2% 88.4%
3717848 2007.2.3.9 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase 0.66 49.0 2.76e-01 84.3% 15.8%
3380863 2007.2.3.9 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › PTPlike_phytase 0.66 50.0 2.77e-01 82.4% 18.9%
3601501 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.65 53.0 2.85e-01 94.1% 14.9%
4067342 5069.1.1.15 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm 0.63 53.0 3.28e-01 98.0% 53.6%
3726808 4163.1.1.1 alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.63 53.0 3.73e-01 98.0% 87.8%
1211453 2498.1.1.23 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M49 0.63 53.0 2.96e-01 98.0% 18.1%
3480534 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 51.0 3.95e-01 92.2% 75.8%
4603329 101.1.2.108 alpha arrays › HTH › HTH › winged helix domain › PuR_N 0.62 47.0 3.99e-01 82.4% 50.0%
3238364 109.4.1.32 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G 0.61 52.0 3.19e-01 100.0% 22.9%
5035888 304.19.1.1 a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain › EIF_2_alpha 0.61 43.0 3.71e-01 80.4% 45.9%
4928248 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 46.0 3.42e-01 82.4% 44.6%
3471111 7573.1.1.4 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase 0.58 52.0 3.35e-01 100.0% 31.9%
4241167 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.58 49.0 3.46e-01 96.1% 38.2%
3998938 6110.1.1.1 alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 0.58 45.0 2.65e-01 90.2% 16.5%
3841567 7573.1.1.4 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase 0.58 51.0 3.38e-01 100.0% 34.0%
3985490 192.2.1.5 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF4376 0.58 43.0 3.23e-01 80.4% 98.4%
4990780 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.57 48.0 3.76e-01 96.1% 56.5%
3267853 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.57 44.0 2.99e-01 92.2% 20.9%
3690229 7573.1.1.4 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase 0.57 50.0 3.31e-01 100.0% 34.0%
3469940 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.57 46.0 3.01e-01 96.1% 36.6%
2576213 219.3.1.0 a+b complex topology › Cysteine proteinases-like › AnkH, inserted middle domain › AnkH, inserted middle domain 0.57 44.0 2.91e-01 88.2% 38.5%
3627409 6166.1.1.1 alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 0.57 49.0 3.32e-01 98.0% 68.0%
3519143 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.56 50.0 3.10e-01 100.0% 26.2%
3742561 7573.1.1.4 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase 0.56 49.0 3.25e-01 100.0% 34.4%
3794245 5001.1.1.5 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.56 50.0 3.32e-01 100.0% 52.6%
4400545 3433.1.2.1 a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer 0.56 43.0 4.29e-01 82.4% 83.0%
3865234 7581.1.1.22 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Thiolase_N, ketoacyl-synt 0.56 42.0 2.78e-01 92.2% 65.0%
3180285 323.1.1.12 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › TRI-like_N 0.56 46.0 3.20e-01 100.0% 40.0%
3888499 7573.1.1.4 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase 0.56 47.0 3.14e-01 100.0% 32.4%
3598920 7573.1.1.0 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like 0.56 47.0 3.14e-01 100.0% 32.4%
5010819 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 47.0 3.44e-01 98.0% 42.0%
5044892 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.55 47.0 3.67e-01 98.0% 60.0%
3727253 3922.1.1.250 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › ATG14 0.55 50.0 2.96e-01 100.0% 21.1%
5060792 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.55 46.0 3.55e-01 98.0% 58.1%
5011620 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 42.0 3.56e-01 86.3% 67.8%
4212883 7573.1.1.4 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase 0.54 46.0 3.11e-01 100.0% 44.9%
3249715 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.53 38.0 2.88e-01 76.5% 52.8%
5051534 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.53 44.0 3.01e-01 94.1% 37.8%
4970751 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.72e-01 88.2% 76.0%
4015000 7573.1.1.0 a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like 0.52 44.0 3.04e-01 100.0% 55.1%
4971747 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.52 43.0 3.42e-01 94.1% 56.4%
3924318 6166.1.1.0 alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 0.52 45.0 3.07e-01 100.0% 71.8%
3928048 261.1.1.1 a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT 0.52 41.0 2.53e-01 100.0% 40.7%
4246264 2007.1.12.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › DHquinase_II 0.52 47.0 3.21e-01 100.0% 46.5%
3285382 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.52 40.0 3.26e-01 90.2% 69.1%
5006003 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.52 42.0 3.29e-01 94.1% 50.8%
5068497 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.51 41.0 3.26e-01 92.2% 53.4%
4991835 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 35.0 3.53e-01 76.5% 72.0%
4943632 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 42.0 3.24e-01 94.1% 50.8%
5048236 314.1.1.3 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d 0.51 43.0 2.61e-01 96.1% 21.4%
5059461 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.51 42.0 3.24e-01 96.1% 57.6%
5048181 101.1.2.819 alpha arrays › HTH › HTH › winged helix domain › PF27231 0.51 43.0 3.07e-01 100.0% 90.6%
5053551 3241.1.1.1 alpha arrays › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › GPP34 0.50 42.0 2.85e-01 98.0% 34.8%