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KJ410740.1__AHV82228.1__X__00103

Bact-Vir

KJ410740.1__AHV82228.1__X__00103

Identity

Accession:
KJ410740 ↗
Kingdom:
phage

Quality

64.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Synechococcus_phage_S-EIVl

TaxID: 1468179

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-72
PDB
D2 medium residues 73-149
PDB
Domain cluster: rep: MN994275.1__QIA28802.1__X__00009__D2-58
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6njyA01 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 38.0 3.31e-01 94.8% 43.1%
1n9eA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.52 43.0 2.74e-01 100.0% 56.1%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.51 42.0 2.68e-01 100.0% 55.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3211918 11.1.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.59 40.0 3.18e-01 70.1% 85.6%
4947502 304.51.1.7 ↗ a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 0.58 40.0 3.15e-01 94.8% 32.9%
3394803 11.1.1.9 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.52 36.0 2.81e-01 72.7% 57.1%
4873245 2485.3.1.2 ↗ a+b three layers › Thioredoxin-like › Major capsid protein gp5 › Major capsid protein gp5 › Linocin_M18 0.51 43.0 3.65e-01 93.5% 100.0%