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KJ410740.1__AHV82250.1__X__00125
Bact-VirKJ410740.1__AHV82250.1__X__00125
Identity
- Accession:
- KJ410740 ↗
- Kingdom:
- phage
Quality
89.4
mean pLDDT
Cluster
View cluster (17 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-29_62-122
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2iz4A02 | 2.20.25.590 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.61 | 25.0 | 3.35e-01 | 71.1% | 71.4% |
| 6eudA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 45.0 | 3.74e-01 | 87.8% | 81.8% |
| 1xjcA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 36.0 | 3.11e-01 | 82.2% | 45.8% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4029085 | 11.16.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › N-terminal domain in A1 cistron-splicing factor AAR2 › N-terminal domain in A1 cistron-splicing factor AAR2 › AAR2_1st | 0.61 | 40.0 | 3.46e-01 | 92.2% | 42.9% |
| 3489613 | 2005.1.1.9 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase | 0.53 | 42.0 | 2.94e-01 | 85.6% | 45.7% |
| 4416753 | 2498.1.1.59 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_U49 | 0.53 | 45.0 | 3.30e-01 | 97.8% | 59.9% |
| 3929962 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.52 | 37.0 | 2.72e-01 | 75.6% | 92.2% |
| 2141918 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 41.0 | 3.27e-01 | 86.7% | 64.5% |
| 3740967 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.51 | 41.0 | 2.94e-01 | 91.1% | 53.9% |
| 3193929 | 2006.1.1.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase | 0.51 | 37.0 | 2.79e-01 | 77.8% | 81.2% |
| 3632513 | 11.16.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › N-terminal domain in A1 cistron-splicing factor AAR2 › N-terminal domain in A1 cistron-splicing factor AAR2 › AAR2_1st | 0.51 | 45.0 | 3.47e-01 | 100.0% | 70.7% |
| 3955788 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 39.0 | 3.27e-01 | 83.3% | 63.2% |
D2
medium
residues 123-197
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fnfA00 | 2.40.50.50 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 35.0 | 3.27e-01 | 82.7% | 42.9% |
| 6zzmA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.60 | 41.0 | 2.97e-01 | 72.0% | 76.8% |
| 3l60A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.54 | 41.0 | 3.04e-01 | 84.0% | 78.2% |
| 8d8lF01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.54 | 47.0 | 4.04e-01 | 100.0% | 95.9% |
| 4c98A02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 38.0 | 3.23e-01 | 78.7% | 93.4% |
| 3qjlA02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 38.0 | 3.39e-01 | 80.0% | 98.3% |
| 3x1lB03 | 2.60.40.4350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 3.47e-01 | 80.0% | 91.4% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.52 | 39.0 | 3.62e-01 | 81.3% | 90.6% |
| 3ufiA02 | 2.60.40.2630 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 3.27e-01 | 80.0% | 53.6% |
| 1hjrA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 40.0 | 3.10e-01 | 82.7% | 49.4% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1346899 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.66 | 49.0 | 3.57e-01 | 80.0% | 65.3% |
| 4936727 | 304.3.1.4 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MCR_D | 0.58 | 44.0 | 3.84e-01 | 81.3% | 80.0% |
| 3233965 | 59.1.1.9 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › EAF | 0.56 | 38.0 | 3.33e-01 | 70.7% | 80.0% |
| 4026603 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.55 | 41.0 | 3.74e-01 | 81.3% | 84.5% |
| 3673973 | 304.12.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 | 0.54 | 40.0 | 3.54e-01 | 81.3% | 84.3% |
| 4929832 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.54 | 40.0 | 3.66e-01 | 81.3% | 84.6% |
| 4062716 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.53 | 38.0 | 3.38e-01 | 78.7% | 75.8% |
| 4226062 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.53 | 40.0 | 3.55e-01 | 84.0% | 79.1% |
| 3282303 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.53 | 46.0 | 3.24e-01 | 100.0% | 91.6% |
| 4487943 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.52 | 38.0 | 3.28e-01 | 80.0% | 67.7% |
| 5078578 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.51 | 38.0 | 3.15e-01 | 81.3% | 92.4% |
| 3280142 | 209.1.2.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like › FGE-sulfatase | 0.51 | 37.0 | 2.73e-01 | 77.3% | 69.4% |
| 4976343 | 810.1.1.2 ↗ | a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › GGACT | 0.51 | 41.0 | 3.58e-01 | 86.7% | 97.3% |
| 4945015 | 821.1.1.4 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF123 | 0.51 | 37.0 | 3.30e-01 | 81.3% | 62.5% |