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KJ473422.1__AHY26640.1__vB_AbaM_Acibel004_25__00025
Bact-VirKJ473422.1__AHY26640.1__vB_AbaM_Acibel004_25__00025
Identity
- Accession:
- KJ473422 ↗
- Kingdom:
- phage
Quality
66.4
mean pLDDT
Taxonomy
TaxID: 1481186
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-109
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bi3A01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.69 | 45.0 | 4.33e-01 | 81.5% | 58.2% |
| 6ijfC01 | 3.90.1720.80 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.69 | 45.0 | 4.34e-01 | 81.5% | 58.1% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 45.0 | 4.55e-01 | 81.5% | 75.9% |
| 2n3gA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 33.0 | 3.53e-01 | 93.8% | 58.3% |
| 1nrkA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.60 | 39.0 | 3.85e-01 | 72.8% | 62.1% |
| 2greF02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.59 | 45.0 | 4.65e-01 | 81.5% | 98.7% |
| 3girA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.59 | 40.0 | 4.01e-01 | 71.6% | 67.4% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 43.0 | 4.02e-01 | 86.4% | 61.9% |
| 1yx2A02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.57 | 39.0 | 3.83e-01 | 70.4% | 65.1% |
| 2p1gA02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.56 | 42.0 | 3.95e-01 | 81.5% | 71.0% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.54 | 40.0 | 3.67e-01 | 80.2% | 82.3% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.54 | 41.0 | 3.97e-01 | 81.5% | 88.9% |
| 3k5iA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 37.0 | 2.86e-01 | 76.5% | 82.8% |
| 1x1fA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 36.0 | 3.02e-01 | 74.1% | 58.4% |
| 4h40A01 | 2.60.40.3730 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like | 0.51 | 44.0 | 3.65e-01 | 100.0% | 67.1% |
| 4epsA01 | 2.60.40.2620 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like | 0.51 | 44.0 | 3.85e-01 | 100.0% | 67.2% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.50 | 43.0 | 2.95e-01 | 100.0% | 61.4% |
| 4h3wA02 | 2.60.120.1260 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 38.0 | 3.15e-01 | 81.5% | 69.1% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1069946 | 219.1.1.52 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Tae4 | 0.69 | 45.0 | 3.54e-01 | 81.5% | 32.5% |
| 3299946 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.60 | 46.0 | 4.12e-01 | 81.5% | 87.8% |
| 4001211 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 40.0 | 4.12e-01 | 79.0% | 71.8% |
| 4946849 | 1.1.5.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red | 0.59 | 40.0 | 3.23e-01 | 70.4% | 34.7% |
| 3930210 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.58 | 45.0 | 3.21e-01 | 84.0% | 47.3% |
| 4958701 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.57 | 49.0 | 4.24e-01 | 100.0% | 60.7% |
| 4861314 | 4356.1.1.1 ↗ | beta complex topology › Coronavirus nsp1 › Coronavirus nsp1 › Coronavirus nsp1 › bCoV_NSP1 | 0.54 | 40.0 | 3.44e-01 | 87.7% | 50.0% |
| 3996204 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 40.0 | 3.56e-01 | 80.2% | 70.8% |
| 5045476 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.53 | 32.0 | 3.80e-01 | 82.7% | 96.0% |
| 3862518 | 4076.1.1.2 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Cauli_VI | 0.53 | 35.0 | 3.93e-01 | 85.2% | 100.0% |
| 3480564 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 39.0 | 3.34e-01 | 80.2% | 82.9% |
| 3426699 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 39.0 | 3.47e-01 | 79.0% | 71.7% |
| 3805726 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 39.0 | 3.48e-01 | 81.5% | 80.0% |
| 185777 | 11.1.4.28 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Mfa_like_2 | 0.51 | 44.0 | 3.66e-01 | 100.0% | 67.9% |