←Back to structures
KJ473422.1__AHY26712.1__vB_AbaM_Acibel004_97__00097
Bact-VirKJ473422.1__AHY26712.1__vB_AbaM_Acibel004_97__00097
Identity
- Accession:
- KJ473422 ↗
- Kingdom:
- phage
Quality
71.4
mean pLDDT
Taxonomy
TaxID: 1481186
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 50-106
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rzmA01 | 3.30.70.1140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 | 0.63 | 44.0 | 3.98e-01 | 75.4% | 82.5% |
| 6p2uA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.60 | 40.0 | 4.11e-01 | 100.0% | 76.9% |
| 2i0zA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 35.0 | 2.32e-01 | 84.2% | 12.7% |
| 3d40A00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.55 | 47.0 | 3.05e-01 | 94.7% | 57.1% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.55 | 38.0 | 3.23e-01 | 100.0% | 43.8% |
| 3l4gB03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.54 | 36.0 | 3.37e-01 | 100.0% | 52.7% |
| 2iq1A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.54 | 41.0 | 2.84e-01 | 91.2% | 94.6% |
| 1b9wA02 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.54 | 33.0 | 3.80e-01 | 78.9% | 89.5% |
| 1ewqA04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.54 | 39.0 | 3.06e-01 | 80.7% | 42.6% |
| 3jrqA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.53 | 44.0 | 2.96e-01 | 100.0% | 55.7% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 41.0 | 3.40e-01 | 89.5% | 65.8% |
| 4jm1A00 | 3.30.300.300 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.52 | 43.0 | 3.94e-01 | 100.0% | 97.6% |
| 1b25A02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.51 | 41.0 | 3.07e-01 | 98.2% | 56.7% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3795771 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.63 | 42.0 | 2.58e-01 | 73.7% | 10.4% |
| 4586240 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.62 | 40.0 | 3.55e-01 | 100.0% | 44.7% |
| 4034249 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.61 | 35.0 | 2.99e-01 | 87.7% | 34.4% |
| 5000245 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.60 | 45.0 | 2.67e-01 | 82.5% | 45.7% |
| 4975301 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.60 | 39.0 | 3.62e-01 | 100.0% | 50.7% |
| 4118091 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.60 | 39.0 | 3.53e-01 | 100.0% | 47.5% |
| 4380325 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.60 | 38.0 | 3.42e-01 | 100.0% | 43.5% |
| 4472709 | 3939.1.1.185 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › WD40, Beta-prop_NOL10_N | 0.59 | 48.0 | 2.94e-01 | 96.5% | 33.3% |
| 3969986 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.59 | 36.0 | 2.41e-01 | 87.7% | 14.0% |
| 4645862 | 101.1.9.5 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › B5 | 0.59 | 40.0 | 3.51e-01 | 100.0% | 45.9% |
| 3503277 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 38.0 | 3.72e-01 | 80.7% | 63.1% |
| 3668025 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.55 | 43.0 | 2.83e-01 | 91.2% | 80.5% |
| 4032395 | 101.1.2.66 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mga | 0.54 | 33.0 | 2.92e-01 | 84.2% | 37.8% |
| 4002148 | 354.1.1.1 ↗ | few secondary structure elements › Sea anemone toxin k-like › Sea anemone toxin k-related › Sea anemone toxin k-related › ShK | 0.54 | 32.0 | 2.53e-01 | 73.7% | 26.2% |
| 4282888 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.52 | 41.0 | 2.88e-01 | 91.2% | 71.4% |
| 3621133 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 42.0 | 2.76e-01 | 96.5% | 32.5% |
| 1720157 | 246.4.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Outer capsid protein VP2 hub domain › Outer capsid protein VP2 hub domain › Orbi_VP2 | 0.51 | 34.0 | 2.58e-01 | 70.2% | 80.6% |