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KJ502657.1__AHN84678.1__PV_027__00027

Bact-Vir

KJ502657.1__AHN84678.1__PV_027__00027

Identity

Accession:
KJ502657 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Autosignataviridae› Gutovirus› Gutovirus_Vc1

TaxID: 2733322

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-62
PDB
Domain cluster: representative
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yz5B00 1.20.190.20 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain 0.73 48.0 3.17e-01 93.0% 17.0%
3whjA00 6.10.140.1710 Special › Helix non-globular › Helix Hairpins › 0.70 49.0 3.89e-01 94.7% 37.8%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.67 45.0 4.20e-01 98.2% 54.7%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.67 50.0 3.88e-01 96.5% 36.8%
3eeeA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.64 46.0 3.27e-01 94.7% 23.9%
3ufeA02 1.20.58.1950 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.63 42.0 4.40e-01 70.2% 94.3%
2lpeA01 6.10.140.1120 Special › Helix non-globular › Helix Hairpins › 0.62 42.0 3.82e-01 96.5% 51.3%
2uxwA01 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.62 48.0 3.33e-01 100.0% 25.8%
1s5jA04 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.61 43.0 4.21e-01 100.0% 68.9%
2pg0A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 48.0 3.49e-01 100.0% 32.2%
3dsqA01 1.10.287.540 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.61 42.0 4.08e-01 93.0% 66.1%
3tahA02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 52.0 4.48e-01 96.5% 71.6%
4h33A00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 46.0 3.94e-01 89.5% 70.3%
8hbfB01 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.56 48.0 3.46e-01 100.0% 80.1%
3mk7A00 1.20.210.10 Mainly Alpha › Up-down Bundle › Cytochrome C Oxidase; Chain A › Cytochrome c oxidase-like, subunit I domain 0.56 50.0 2.94e-01 98.2% 16.1%
3e22A03 1.10.287.600 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.56 46.0 4.71e-01 98.2% 94.4%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.55 46.0 4.11e-01 96.5% 66.7%
2nrkA00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.55 46.0 3.29e-01 100.0% 32.1%
2yevC00 6.10.280.110 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 45.0 4.40e-01 98.2% 82.5%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.54 43.0 3.88e-01 98.2% 62.0%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.54 45.0 3.73e-01 98.2% 99.1%
2mpnA00 6.10.140.1340 Special › Helix non-globular › Helix Hairpins › 0.53 43.0 4.05e-01 100.0% 73.5%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.53 47.0 3.84e-01 96.5% 74.5%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.53 47.0 4.51e-01 96.5% 95.3%
1jkwA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 39.0 3.35e-01 82.5% 71.3%
1br0A00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 44.0 3.52e-01 94.7% 45.8%
1f45B00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.53 46.0 3.56e-01 100.0% 100.0%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 46.0 4.17e-01 98.2% 73.7%
1u7lA02 1.20.1460.10 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 0.52 44.0 3.16e-01 100.0% 88.5%
4b1bA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 40.0 2.51e-01 100.0% 78.0%
4bjqA00 1.10.150.770 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.51 38.0 3.62e-01 91.2% 69.2%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.51 46.0 4.04e-01 100.0% 87.8%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4268621 320.6.1.1 ↗ a+b two layers › R3H domain-like › Cysteine methyltransferase effector NleE › Cysteine methyltransferase effector NleE › NleE 0.62 44.0 2.99e-01 75.4% 66.3%
5038534 633.6.1.1 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 0.61 48.0 3.51e-01 98.2% 33.1%
4983842 633.6.1.1 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 0.61 45.0 3.44e-01 84.2% 93.3%
3923090 633.6.1.1 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 0.60 44.0 3.31e-01 82.5% 89.9%
1002194 192.23.1.1 ↗ alpha bundles › Long alpha-hairpin › DUF683 › DUF683 › Rop-like 0.59 46.0 4.25e-01 96.5% 67.6%
4973175 159.1.2.33 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › dUTPase_2 0.59 49.0 3.87e-01 100.0% 45.2%
3354816 4992.1.1.0 ↗ extended segments › RelB-like › RelB-like › RelB-like 0.58 46.0 4.42e-01 94.7% 75.4%
3386547 4168.1.1.0 ↗ alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain 0.57 41.0 4.07e-01 75.4% 78.3%
4123079 4168.1.1.0 ↗ alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain 0.57 41.0 4.22e-01 75.4% 87.3%
3590182 4979.1.1.0 ↗ alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › C-terminal domain of Hypothetical protein MPN330 › C-terminal domain of Hypothetical protein MPN330 0.56 46.0 4.14e-01 94.7% 68.2%
3677836 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.56 42.0 3.28e-01 96.5% 38.3%
353472 5054.1.1.8 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.55 45.0 3.67e-01 94.7% 60.9%
3893414 1021.1.1.0 ↗ a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.54 45.0 3.78e-01 98.2% 90.5%
4369324 101.1.1.142 ↗ alpha arrays › HTH › HTH › Three-helical HTH › clamp_Gag1-like 0.54 38.0 3.87e-01 84.2% 76.4%
4028746 10.28.1.1 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in Zinc finger protein ZPR1 › Jelly-roll domain in Zinc finger protein ZPR1 › jr-ZPR1 0.54 45.0 3.29e-01 94.7% 37.5%
3282208 150.5.1.1 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 0.54 48.0 4.08e-01 100.0% 62.2%
4960548 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.53 42.0 2.93e-01 94.7% 27.2%
4545543 517.2.1.1 ↗ beta barrels › CBF-like › TraF › TraF › TrbI 0.53 44.0 3.01e-01 100.0% 26.1%
3319283 601.2.1.5 ↗ alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › Ctr 0.51 41.0 3.17e-01 100.0% 38.5%
3414102 5055.1.1.0 ↗ extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel 0.50 45.0 4.19e-01 100.0% 100.0%