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KJ534580.1__AHX01068.1__M316_0003__00003

Bact-Vir

KJ534580.1__AHX01068.1__M316_0003__00003

Identity

Accession:
KJ534580 ↗
Kingdom:
phage

Quality

88.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Nitrincola_phage_1M3-16

TaxID: 1472912

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 9-79
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5hxgB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.57 39.0 4.10e-01 74.6% 76.9%
2avuB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.57 38.0 3.34e-01 74.6% 45.2%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 4.39e-01 87.3% 86.4%
3wirA02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.51 40.0 2.57e-01 87.3% 70.5%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4651792 101.1.13.1 ↗ alpha arrays › HTH › HTH › Flagellar transcriptional activator FlhD › FlhD 0.60 39.0 3.87e-01 74.6% 62.7%
4416847 101.1.13.1 ↗ alpha arrays › HTH › HTH › Flagellar transcriptional activator FlhD › FlhD 0.59 39.0 3.53e-01 74.6% 49.5%
3610143 109.4.1.257 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PDS5 0.56 47.0 3.09e-01 94.4% 44.1%
3173245 610.2.1.0 ↗ alpha arrays › ERP29 C domain-like › Helical domain of Sec23/24 › Helical domain of Sec23/24 0.54 43.0 2.94e-01 88.7% 82.2%
4962330 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 3.62e-01 80.3% 70.6%
3701039 109.4.1.295 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COP9_hel_rpt 0.51 43.0 2.97e-01 100.0% 34.8%
4030072 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 43.0 3.07e-01 100.0% 53.9%
3595011 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 38.0 3.74e-01 95.8% 76.0%