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KJ534580.1__AHX01165.1__M316_0100__00100

Bact-Vir

KJ534580.1__AHX01165.1__M316_0100__00100

Identity

Accession:
KJ534580 ↗
Kingdom:
phage

Quality

90.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Nitrincola_phage_1M3-16

TaxID: 1472912

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-62
PDB
Domain cluster: rep: KJ534580.1__AHX01161.1__M316_0096__00096__D78-136
D2 high residues 73-146
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fxkC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 45.0 3.73e-01 89.2% 39.8%
3floB00 1.10.3200.20 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › DNA Polymerase alpha, zinc finger 0.61 44.0 3.30e-01 75.7% 37.8%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.59 41.0 2.82e-01 74.3% 35.3%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.56 38.0 3.19e-01 70.3% 68.5%
4rkiA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 38.0 3.18e-01 71.6% 67.7%
3t91B00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.55 38.0 2.84e-01 74.3% 60.7%
3ibjA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.55 48.0 3.63e-01 97.3% 99.4%
2wr1A02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.51 37.0 2.71e-01 78.4% 68.8%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3743107 227.1.1.11 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.61 41.0 3.33e-01 70.3% 66.4%
3722114 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.60 41.0 3.21e-01 70.3% 52.9%
3785352 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.60 41.0 3.20e-01 71.6% 67.3%
143267 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.59 40.0 3.38e-01 71.6% 67.7%
2486933 7032.1.1.1 ↗ a+b two layers › Paratox › Paratox › Paratox › Paratox 0.58 39.0 4.09e-01 74.3% 76.5%
4998584 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.58 40.0 3.25e-01 70.3% 67.4%
4038410 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.58 40.0 3.23e-01 71.6% 69.3%
3256904 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.57 39.0 3.31e-01 71.6% 69.6%
4172290 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.57 39.0 3.23e-01 70.3% 66.2%
3804177 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.57 43.0 3.50e-01 82.4% 69.0%
4645961 102.2.1.3 ↗ alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N 0.56 45.0 3.31e-01 86.5% 33.7%
5052550 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.55 38.0 3.22e-01 71.6% 68.8%
3397928 227.1.1.12 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 0.55 37.0 3.17e-01 71.6% 70.4%
4870150 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.54 37.0 3.07e-01 71.6% 64.2%
4026073 227.1.1.1 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.54 37.0 3.16e-01 71.6% 71.2%
1822927 227.1.1.2 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.53 37.0 2.86e-01 71.6% 53.4%
4578190 2002.1.1.42 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › A_deaminase,A_deaminase_N 0.50 46.0 2.77e-01 100.0% 35.9%