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KJ591605.1__AID17593.1__X__00139

Bact-Vir

KJ591605.1__AID17593.1__X__00139

Identity

Accession:
KJ591605 ↗
Kingdom:
phage

Quality

71.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Pecentumvirus› Listeria_phage_LMTA-57

TaxID: 1486414

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-80
PDB
Domain cluster: rep: OM112210.1__UKL30017.1__X__00018__D342-385
D2 high residues 99-171
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 62.0 6.47e-01 100.0% 90.9%
2epdA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 54.0 5.38e-01 100.0% 71.1%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 59.0 6.03e-01 100.0% 87.1%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 54.0 5.97e-01 95.9% 98.2%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 61.0 6.30e-01 100.0% 98.5%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 56.0 5.81e-01 100.0% 88.2%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 51.0 4.62e-01 100.0% 55.1%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 51.0 5.26e-01 100.0% 80.0%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 50.0 5.39e-01 100.0% 90.3%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 52.0 5.61e-01 100.0% 96.7%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 50.0 5.46e-01 100.0% 96.6%
1xovA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 52.0 5.37e-01 97.3% 89.4%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 50.0 5.39e-01 100.0% 94.9%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 56.0 5.64e-01 100.0% 89.2%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 49.0 5.37e-01 100.0% 98.3%
3q6aB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.67 36.0 2.96e-01 86.3% 28.4%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 41.0 4.05e-01 98.6% 57.5%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 40.0 4.51e-01 100.0% 83.6%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 40.0 4.46e-01 100.0% 84.9%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.64 37.0 4.33e-01 95.9% 89.1%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.63 42.0 4.83e-01 100.0% 100.0%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.63 39.0 4.37e-01 100.0% 86.5%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 39.0 4.34e-01 100.0% 83.9%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 38.0 4.31e-01 100.0% 88.5%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.61 41.0 4.27e-01 100.0% 77.3%
2qqrA02 3.10.330.70 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.57 39.0 4.48e-01 94.5% 100.0%
4wsfA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 43.0 3.81e-01 84.9% 91.9%
4dixA02 2.30.29.140 Mainly Beta › Roll › PH-domain like › 0.56 46.0 3.98e-01 95.9% 89.6%
4nh0A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 42.0 3.03e-01 84.9% 93.8%
1x1fA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 46.0 3.72e-01 94.5% 67.1%
1kz7C02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 45.0 3.78e-01 94.5% 76.6%
2y9fA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 45.0 3.63e-01 93.2% 97.3%
3cxbB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 43.0 4.00e-01 93.2% 91.3%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 3.75e-01 95.9% 84.3%
2rloA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 44.0 3.77e-01 94.5% 92.2%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 3.89e-01 93.2% 93.6%
3a8pB01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 3.85e-01 94.5% 85.3%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 4.04e-01 100.0% 85.1%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.81e-01 93.2% 85.5%
2dn6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.75e-01 93.2% 76.5%
1upqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.86e-01 94.5% 86.0%
1v5pA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 3.94e-01 94.5% 95.1%
2dtcA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 44.0 3.85e-01 95.9% 89.7%
1mi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 41.0 3.78e-01 91.8% 96.2%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 41.0 3.54e-01 94.5% 69.4%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.77e-01 94.5% 79.8%
1dbhA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.59e-01 94.5% 77.3%
2elbA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.84e-01 97.3% 84.3%
4xpmB00 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.51 34.0 3.53e-01 94.5% 76.1%
4k17B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.69e-01 94.5% 77.5%
1droA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 42.0 3.66e-01 97.3% 85.2%
1pj5A05 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.51 36.0 3.57e-01 91.8% 70.5%
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.50 31.0 3.39e-01 94.5% 77.6%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4038705 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.82 65.0 6.85e-01 100.0% 95.4%
4537356 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.81 63.0 6.83e-01 97.3% 100.0%
4196229 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.81 63.0 6.43e-01 100.0% 87.1%
4003171 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 54.0 5.26e-01 100.0% 70.0%
1290375 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.74 61.0 6.29e-01 100.0% 97.1%
4082863 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 53.0 5.44e-01 100.0% 80.0%
3234947 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 53.0 5.57e-01 100.0% 86.2%
3188199 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 53.0 5.16e-01 100.0% 70.0%
3398298 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 52.0 5.08e-01 98.6% 68.8%
3930461 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 53.0 5.25e-01 100.0% 74.7%
3890893 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 52.0 5.79e-01 97.3% 100.0%
3842441 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 52.0 5.62e-01 100.0% 93.3%
3494671 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 43.0 5.15e-01 79.5% 97.8%
3846212 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 51.0 4.97e-01 100.0% 70.0%
3507664 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 51.0 5.45e-01 100.0% 93.3%
3416133 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 51.0 5.06e-01 100.0% 74.7%
3486189 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 51.0 5.50e-01 100.0% 95.0%
3222147 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 46.0 4.94e-01 100.0% 85.0%
3849311 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 48.0 5.17e-01 100.0% 93.3%
3815479 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 41.0 4.07e-01 100.0% 60.0%
3868320 4.1.1.65 ↗ beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.65 42.0 4.40e-01 100.0% 73.8%
3359784 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 40.0 4.17e-01 100.0% 69.2%
3313119 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 39.0 3.87e-01 100.0% 56.2%
3830763 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 39.0 3.85e-01 100.0% 56.2%
3510676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 40.0 3.69e-01 100.0% 49.5%
3256498 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 38.0 4.12e-01 100.0% 81.8%
3581143 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.59 39.0 4.11e-01 100.0% 76.9%
4385448 220.1.1.154 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_EXO84 0.58 47.0 3.56e-01 94.5% 55.4%
3718060 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 46.0 4.10e-01 93.2% 87.0%
3928063 220.4.1.0 ↗ beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins 0.57 45.0 4.42e-01 89.0% 87.5%
3274551 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 39.0 3.93e-01 100.0% 70.7%
4930437 220.1.1.219 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.56 44.0 3.97e-01 87.7% 88.6%
3933119 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 45.0 3.89e-01 94.5% 93.1%
3470252 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.55 44.0 3.99e-01 94.5% 92.7%
3882131 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.55 44.0 2.90e-01 94.5% 24.8%
3223257 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.54 44.0 3.86e-01 94.5% 85.8%
3252283 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 44.0 3.83e-01 94.5% 77.6%
3595300 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 44.0 4.10e-01 93.2% 93.7%
3810543 220.1.1.20 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH 0.54 43.0 3.85e-01 90.4% 82.7%
167832 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 44.0 3.77e-01 94.5% 92.2%
3249394 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.54 44.0 3.54e-01 94.5% 64.4%
3225003 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 43.0 3.78e-01 93.2% 80.0%
3743239 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 44.0 3.37e-01 94.5% 76.2%
3895387 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 42.0 3.79e-01 93.2% 83.5%
3270288 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 43.0 3.98e-01 94.5% 91.0%
3998029 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 43.0 3.92e-01 94.5% 82.9%
3260374 220.1.1.43 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH 0.53 43.0 4.05e-01 94.5% 94.6%
3874132 220.1.1.170 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.53 44.0 3.84e-01 95.9% 69.6%
3248246 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 42.0 3.64e-01 94.5% 86.2%
3478666 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 43.0 3.89e-01 94.5% 84.8%
3995979 220.1.1.34 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_9 0.52 42.0 3.63e-01 94.5% 73.1%
3270836 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.52 42.0 3.72e-01 93.2% 75.7%
3742641 220.1.1.58 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.52 43.0 3.88e-01 97.3% 78.2%
4096988 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 42.0 3.07e-01 94.5% 37.9%
3175878 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.43e-01 94.5% 54.8%
3259128 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.52 42.0 3.66e-01 94.5% 69.6%
3768329 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.63e-01 94.5% 74.4%
3698917 220.1.1.30 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.52 41.0 3.64e-01 94.5% 88.3%
3779393 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.51 41.0 3.51e-01 93.2% 69.2%
3210606 220.1.1.58 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.51 42.0 3.61e-01 94.5% 84.0%
3416287 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 41.0 3.48e-01 94.5% 84.8%
4030499 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.51 41.0 3.52e-01 95.9% 73.9%
4949942 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 41.0 3.89e-01 93.2% 96.6%