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KJ608188.1__AIS73941.1__X__00004

Bact-Vir

KJ608188.1__AIS73941.1__X__00004

Identity

Accession:
KJ608188 ↗
Kingdom:
phage

Quality

81.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-72
PDB
Pfam (5)
AccessionNameScoreE-valueQ covHMM cov
PF12844.14 best HTH_19 34.3 2.40e-08 86.1% 85.9%
PF13560.13 HTH_31 27.3 5.20e-06 83.3% 68.8%
PF13443.13 HTH_26 41.6 1.60e-10 81.9% 90.5%
PF01381.29 HTH_3 46.9 3.10e-12 76.4% 92.7%
PF13412.13 HTH_24 23.9 3.40e-05 40.3% 54.2%
D2 medium residues 81-112
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4p02A02 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.80 70.0 4.12e-01 96.9% 12.8%
1tz9A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.75 63.0 3.58e-01 100.0% 9.0%
3g7dA04 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 59.0 4.24e-01 100.0% 98.9%
1qycA02 3.90.25.10 Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 0.64 48.0 3.45e-01 90.6% 26.7%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5080427 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.77 65.0 4.83e-01 96.9% 68.8%