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KJ608189.1__AIS74006.1__X__00010
Bact-VirKJ608189.1__AIS74006.1__X__00010
Identity
- Accession:
- KJ608189 ↗
- Kingdom:
- phage
Quality
68.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 682-738
Domain cluster:
rep: IMGVR_UViG_3300014040_000006-3300014040-Ga0117811_100027527__D293-345
D2
high
residues 1476-1563
Domain cluster:
rep: IMGVR_UViG_3300010235_000004-3300010235-Ga0136247_100002931__D99-185
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gudA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 69.0 | 6.16e-01 | 93.2% | 95.0% |
| 3gw6D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 66.0 | 5.43e-01 | 100.0% | 85.1% |
| 7k98E03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.56 | 31.0 | 3.47e-01 | 80.7% | 67.6% |
| 3e53A00 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.51 | 36.0 | 2.37e-01 | 75.0% | 60.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033696 | 3240.1.1.0 ↗ | alpha arrays › Intramolecular chaperone domain in virus tail spike protein › Intramolecular chaperone domain in virus tail spike protein › Intramolecular chaperone domain in virus tail spike protein | 0.93 | 89.0 | 7.86e-01 | 100.0% | 89.2% |
| 3612509 | 1189.1.1.0 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor | 0.67 | 56.0 | 4.13e-01 | 94.3% | 49.8% |
| 3277618 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.64 | 37.0 | 3.95e-01 | 98.9% | 66.7% |
| 3194375 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 45.0 | 2.89e-01 | 95.5% | 28.2% |
| 3942262 | 5063.1.1.0 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK | 0.51 | 29.0 | 3.18e-01 | 94.3% | 69.2% |
| 4014086 | 109.4.1.777 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 34.0 | 2.31e-01 | 98.9% | 18.4% |
| 3731212 | 192.24.1.0 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain | 0.51 | 33.0 | 3.43e-01 | 97.7% | 69.4% |
| 3731261 | 101.1.2.520 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7779 | 0.50 | 35.0 | 3.43e-01 | 72.7% | 89.5% |
D3
medium
residues 1-93
Domain cluster:
rep: OP323076.1__UXD81499.1__D4840_021__00021__D3-85
CATH (67)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.76 | 60.0 | 6.49e-01 | 89.2% | 98.7% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.75 | 56.0 | 5.65e-01 | 82.8% | 78.3% |
| 3cb0D00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.72 | 62.0 | 5.12e-01 | 92.5% | 74.5% |
| 2qckA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.72 | 62.0 | 5.23e-01 | 92.5% | 76.2% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.72 | 61.0 | 4.85e-01 | 90.3% | 48.0% |
| 1ejeA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.71 | 61.0 | 4.74e-01 | 92.5% | 64.1% |
| 2d37A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.71 | 61.0 | 5.07e-01 | 92.5% | 74.2% |
| 4l82A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.71 | 60.0 | 5.04e-01 | 92.5% | 75.0% |
| 5choF00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.71 | 60.0 | 5.00e-01 | 92.5% | 75.0% |
| 2r6vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.70 | 60.0 | 4.94e-01 | 92.5% | 73.2% |
| 1uscA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.70 | 60.0 | 4.80e-01 | 92.5% | 66.3% |
| 1rz1A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.70 | 60.0 | 5.06e-01 | 92.5% | 75.0% |
| 2ecuA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.70 | 60.0 | 5.09e-01 | 92.5% | 72.5% |
| 3nfwA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.70 | 60.0 | 4.80e-01 | 92.5% | 64.8% |
| 8ct0B01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.70 | 59.0 | 4.87e-01 | 92.5% | 71.7% |
| 3bnkA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.69 | 59.0 | 4.69e-01 | 92.5% | 64.5% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 35.0 | 3.92e-01 | 78.5% | 61.3% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.69 | 55.0 | 5.17e-01 | 93.5% | 70.3% |
| 4q63A00 | 2.40.10.430 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.69 | 47.0 | 4.79e-01 | 94.6% | 71.0% |
| 4f07E00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.69 | 59.0 | 5.01e-01 | 92.5% | 75.8% |
| 1i0rA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.69 | 58.0 | 4.85e-01 | 92.5% | 75.2% |
| 4xhyA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.69 | 59.0 | 4.87e-01 | 92.5% | 71.4% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.69 | 59.0 | 5.41e-01 | 93.5% | 89.9% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 49.0 | 5.08e-01 | 75.3% | 81.4% |
| 3pftA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.67 | 58.0 | 4.85e-01 | 93.5% | 75.0% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.67 | 51.0 | 5.19e-01 | 80.6% | 82.8% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.67 | 49.0 | 4.51e-01 | 93.5% | 58.4% |
| 6c98A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 44.0 | 4.49e-01 | 75.3% | 72.5% |
| 1o0vA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 45.0 | 4.24e-01 | 75.3% | 65.5% |
| 3f56A01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.62 | 46.0 | 4.39e-01 | 77.4% | 77.4% |
| 2gysA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 45.0 | 4.54e-01 | 77.4% | 81.1% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.61 | 51.0 | 4.67e-01 | 93.5% | 69.7% |
| 5f7uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 43.0 | 4.07e-01 | 74.2% | 73.0% |
| 3d2uA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 43.0 | 4.34e-01 | 74.2% | 75.0% |
| 1xzwA01 | 2.60.40.380 | Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal | 0.60 | 43.0 | 4.22e-01 | 74.2% | 72.4% |
| 1wzlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 44.0 | 4.07e-01 | 78.5% | 62.8% |
| 3aqoA02 | 3.30.1360.200 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.59 | 50.0 | 4.33e-01 | 91.4% | 85.8% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 44.0 | 4.29e-01 | 93.5% | 71.2% |
| 2q7nA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 40.0 | 4.03e-01 | 78.5% | 68.4% |
| 2cy5A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 38.0 | 3.46e-01 | 93.5% | 48.1% |
| 5tr9A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 41.0 | 4.12e-01 | 79.6% | 71.9% |
| 2d5wA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.57 | 43.0 | 4.03e-01 | 80.6% | 88.0% |
| 7byjA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 35.0 | 3.53e-01 | 91.4% | 60.0% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 42.0 | 3.39e-01 | 76.3% | 78.0% |
| 7pjjA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 43.0 | 3.89e-01 | 80.6% | 91.5% |
| 1a8pA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 40.0 | 4.07e-01 | 93.5% | 73.7% |
| 1eerC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 39.0 | 3.86e-01 | 74.2% | 68.0% |
| 5ylyA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 42.0 | 4.03e-01 | 90.3% | 67.9% |
| 5z0uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 3.79e-01 | 78.5% | 62.9% |
| 1s67L00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 39.0 | 3.62e-01 | 73.1% | 80.7% |
| 3f3zA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 39.0 | 4.18e-01 | 74.2% | 84.1% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.55 | 43.0 | 3.86e-01 | 86.0% | 60.1% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 41.0 | 4.02e-01 | 81.7% | 73.0% |
| 4qqsB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 46.0 | 3.24e-01 | 93.5% | 93.6% |
| 2l8kA00 | 3.30.1330.220 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Arterivirus nonstructural protein 7 alpha | 0.54 | 43.0 | 3.89e-01 | 83.9% | 77.2% |
| 4azsA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 39.0 | 4.16e-01 | 75.3% | 93.8% |
| 1y5oA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 37.0 | 3.54e-01 | 93.5% | 60.0% |
| 2weiA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 37.0 | 3.85e-01 | 74.2% | 78.9% |
| 3rnsA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 37.0 | 3.65e-01 | 74.2% | 87.0% |
| 4gioA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 42.0 | 4.22e-01 | 93.5% | 86.5% |
| 4gc8B00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.52 | 43.0 | 3.60e-01 | 94.6% | 77.6% |
| 3kulA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 36.0 | 3.75e-01 | 74.2% | 82.0% |
| 2bn4B03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 43.0 | 3.67e-01 | 93.5% | 58.9% |
| 3l4gC04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 45.0 | 3.24e-01 | 98.9% | 87.2% |
| 2xrnA02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 39.0 | 3.24e-01 | 83.9% | 68.9% |
| 3d3oA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 38.0 | 3.21e-01 | 81.7% | 73.3% |
| 2veaA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 39.0 | 3.50e-01 | 82.8% | 63.1% |
ECOD (81)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 64.0 | 6.16e-01 | 89.2% | 95.2% |
| 3868227 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.75 | 53.0 | 5.30e-01 | 74.2% | 71.6% |
| 4500974 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.74 | 59.0 | 5.44e-01 | 93.5% | 65.8% |
| 3786062 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.73 | 62.0 | 5.04e-01 | 92.5% | 72.1% |
| 3744150 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.72 | 62.0 | 4.91e-01 | 92.5% | 66.8% |
| 164880 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.72 | 62.0 | 5.14e-01 | 92.5% | 72.3% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.71 | 55.0 | 5.02e-01 | 81.7% | 64.2% |
| 300370 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.71 | 61.0 | 5.05e-01 | 92.5% | 73.7% |
| 1217791 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.70 | 60.0 | 4.88e-01 | 92.5% | 66.1% |
| 1883205 | 1.1.13.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N | 0.70 | 59.0 | 5.59e-01 | 90.3% | 92.7% |
| 3501754 | 1.1.13.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N | 0.70 | 60.0 | 5.76e-01 | 92.5% | 94.3% |
| 77 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.69 | 55.0 | 5.19e-01 | 93.5% | 70.9% |
| 4316037 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.69 | 54.0 | 5.11e-01 | 93.5% | 70.0% |
| 4032900 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 59.0 | 5.64e-01 | 91.4% | 97.1% |
| 3720023 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 54.0 | 5.29e-01 | 86.0% | 78.0% |
| 3251680 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.68 | 50.0 | 4.52e-01 | 77.4% | 62.4% |
| 1501 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 49.0 | 4.91e-01 | 75.3% | 74.5% |
| 3247872 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.68 | 50.0 | 4.51e-01 | 77.4% | 62.4% |
| 3264433 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.67 | 48.0 | 4.52e-01 | 75.3% | 61.7% |
| 3884572 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 46.0 | 4.80e-01 | 73.1% | 77.6% |
| 3844943 | 11.1.1.117 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EpoR_lig-bind | 0.66 | 47.0 | 4.76e-01 | 75.3% | 73.7% |
| 3807393 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.66 | 47.0 | 4.44e-01 | 77.4% | 62.7% |
| 3256332 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.65 | 48.0 | 4.41e-01 | 78.5% | 61.6% |
| 3272116 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.65 | 51.0 | 4.38e-01 | 82.8% | 66.2% |
| 3417889 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.65 | 47.0 | 4.48e-01 | 93.5% | 64.5% |
| 3741921 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.65 | 52.0 | 4.97e-01 | 84.9% | 82.9% |
| 3812071 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.64 | 46.0 | 4.33e-01 | 93.5% | 60.9% |
| 3259959 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 44.0 | 4.34e-01 | 74.2% | 66.0% |
| 3266329 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.64 | 45.0 | 3.99e-01 | 79.6% | 49.3% |
| 3872070 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.64 | 46.0 | 4.15e-01 | 75.3% | 58.4% |
| 3256728 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.64 | 50.0 | 4.33e-01 | 84.9% | 67.6% |
| 5036802 | 205.1.1.1 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 | 0.64 | 43.0 | 3.78e-01 | 74.2% | 46.4% |
| 3202063 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.63 | 48.0 | 4.32e-01 | 80.6% | 74.6% |
| 5034906 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.63 | 43.0 | 3.67e-01 | 72.0% | 42.5% |
| 3785228 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.63 | 46.0 | 4.48e-01 | 93.5% | 68.6% |
| 3216916 | 220.1.1.23 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ICAP-1_inte_bdg | 0.63 | 40.0 | 3.41e-01 | 92.5% | 40.0% |
| 3970830 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 53.0 | 5.25e-01 | 93.5% | 95.0% |
| 5049721 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 55.0 | 4.98e-01 | 96.8% | 79.2% |
| 3491307 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 47.0 | 4.13e-01 | 89.2% | 53.6% |
| 3689402 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.62 | 45.0 | 4.36e-01 | 76.3% | 71.4% |
| 4061526 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.62 | 45.0 | 4.41e-01 | 91.4% | 70.0% |
| 4361509 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.62 | 44.0 | 4.31e-01 | 93.5% | 69.0% |
| 5055001 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 43.0 | 4.56e-01 | 78.5% | 83.7% |
| 3614391 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 46.0 | 4.56e-01 | 82.8% | 74.0% |
| 4259247 | 1.11.1.1 ↗ | beta barrels › cradle loop barrel › Photosystem II accessory factor Psb28 › Photosystem II accessory factor Psb28 › Psb28 | 0.62 | 48.0 | 4.76e-01 | 93.5% | 79.8% |
| 3908752 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.61 | 42.0 | 3.84e-01 | 76.3% | 52.8% |
| 4542543 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.60 | 44.0 | 4.24e-01 | 82.8% | 65.5% |
| 3638578 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.60 | 37.0 | 3.99e-01 | 89.2% | 73.1% |
| 32412 | 11.1.1.214 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Pur_ac_phosph_N | 0.60 | 44.0 | 4.12e-01 | 76.3% | 67.3% |
| 3193183 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.60 | 49.0 | 4.54e-01 | 93.5% | 70.0% |
| 3390309 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 44.0 | 4.19e-01 | 79.6% | 65.5% |
| 4012221 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 42.0 | 3.92e-01 | 93.5% | 57.5% |
| 3572941 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.60 | 44.0 | 4.31e-01 | 89.2% | 70.5% |
| 4373113 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 45.0 | 4.34e-01 | 93.5% | 70.5% |
| 3263588 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.60 | 50.0 | 3.80e-01 | 93.5% | 70.0% |
| 4964649 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 45.0 | 4.69e-01 | 90.3% | 87.1% |
| 3997045 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.59 | 42.0 | 4.23e-01 | 93.5% | 72.6% |
| 3583959 | 220.1.1.23 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ICAP-1_inte_bdg | 0.59 | 38.0 | 3.33e-01 | 92.5% | 42.4% |
| 3638266 | 11.1.1.554 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PhoD_2 | 0.59 | 43.0 | 4.21e-01 | 76.3% | 74.0% |
| 4241432 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.58 | 38.0 | 3.44e-01 | 93.5% | 48.8% |
| 3259329 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.58 | 48.0 | 3.61e-01 | 90.3% | 85.2% |
| 4612821 | 11.1.1.46 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha-amylase_N | 0.58 | 43.0 | 3.97e-01 | 78.5% | 62.5% |
| 3905772 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.58 | 41.0 | 4.01e-01 | 74.2% | 69.0% |
| 3945286 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 43.0 | 4.15e-01 | 93.5% | 70.5% |
| 4532022 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 44.0 | 3.85e-01 | 93.5% | 53.8% |
| 4507316 | 220.1.1.20 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH | 0.57 | 39.0 | 3.65e-01 | 93.5% | 57.4% |
| 4943168 | 1.1.7.144 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11 | 0.57 | 44.0 | 4.41e-01 | 83.9% | 88.4% |
| 5023286 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.56 | 37.0 | 3.60e-01 | 71.0% | 60.0% |
| 4473935 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 39.0 | 3.98e-01 | 77.4% | 72.3% |
| 4032997 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 42.0 | 3.86e-01 | 92.5% | 60.0% |
| 3253620 | 11.1.1.801 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 | 0.56 | 41.0 | 3.66e-01 | 79.6% | 54.1% |
| 3263949 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 37.0 | 3.74e-01 | 76.3% | 67.4% |
| 3858552 | 220.1.1.5 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PID | 0.56 | 37.0 | 2.96e-01 | 93.5% | 33.7% |
| 3248639 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.55 | 38.0 | 3.81e-01 | 80.6% | 68.0% |
| 4137984 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.53 | 39.0 | 3.64e-01 | 78.5% | 76.7% |
| 3972760 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.53 | 34.0 | 3.80e-01 | 77.4% | 85.7% |
| 3198907 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 38.0 | 3.96e-01 | 75.3% | 83.5% |
| 220098 | 11.1.1.93 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1425 | 0.52 | 42.0 | 4.22e-01 | 93.5% | 86.5% |
| 3389979 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.52 | 39.0 | 3.60e-01 | 79.6% | 76.7% |
| 5041017 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 37.0 | 3.76e-01 | 74.2% | 77.8% |
| 4202460 | 243.3.1.5 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP | 0.50 | 34.0 | 3.52e-01 | 95.7% | 72.2% |
D4
medium
residues 94-176
Domain cluster:
rep: NC_055031.1__YP_010082455.1__KMD20_gp20__00020__D105-176
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26674.1 best | Prophage_tail_N2 | 37.2 | 4.40e-09 | 91.6% | 87.8% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4m0nA02 | 3.55.50.30 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › | 0.79 | 66.0 | 6.86e-01 | 97.6% | 97.4% |
| 1wruA02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.76 | 68.0 | 6.74e-01 | 98.8% | 92.0% |
| 3d37A02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.75 | 64.0 | 6.42e-01 | 98.8% | 91.8% |
| 3adyA00 | 3.55.50.60 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › DotD protein | 0.74 | 65.0 | 6.09e-01 | 100.0% | 78.4% |
| 2p5zX02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.73 | 65.0 | 6.21e-01 | 100.0% | 91.8% |
| 4uhvA02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.70 | 62.0 | 6.00e-01 | 100.0% | 91.3% |
| 2wzpR02 | 3.55.50.50 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Phage tail base-plate attachment protein, domain D4 | 0.69 | 59.0 | 5.58e-01 | 96.4% | 93.9% |
| 6blkC00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.60 | 49.0 | 3.95e-01 | 88.0% | 70.9% |
| 5uayA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.60 | 43.0 | 4.35e-01 | 84.3% | 75.9% |
| 4k3bA05 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.59 | 39.0 | 4.07e-01 | 86.7% | 72.2% |
| 6j09A01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 35.0 | 3.82e-01 | 85.5% | 82.1% |
| 6j09A02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.52 | 40.0 | 4.11e-01 | 81.9% | 88.5% |
| 4k3bA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 40.0 | 3.99e-01 | 85.5% | 83.3% |
| 1vwxd00 | 3.10.440.10 | Alpha Beta › Roll › Ribosomal Protein L31e; Chain: W; › Ribosomal protein L31 | 0.51 | 42.0 | 3.87e-01 | 91.6% | 73.8% |
| 2qdfA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.50 | 38.0 | 3.86e-01 | 85.5% | 83.1% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3948879 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.89 | 73.0 | 7.68e-01 | 97.6% | 96.0% |
| 4008875 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.88 | 75.0 | 7.86e-01 | 100.0% | 98.7% |
| 4031358 | 3070.1.1.18 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF26674 | 0.87 | 80.0 | 7.62e-01 | 98.8% | 89.5% |
| 3966286 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.87 | 73.0 | 7.70e-01 | 100.0% | 98.7% |
| 4033374 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.85 | 75.0 | 7.51e-01 | 96.4% | 92.9% |
| 1815424 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.84 | 69.0 | 7.23e-01 | 97.6% | 96.0% |
| 185652 | 3070.1.1.4 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN | 0.83 | 72.0 | 6.10e-01 | 100.0% | 60.2% |
| 4480906 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.81 | 68.0 | 7.00e-01 | 100.0% | 95.0% |
| 3974036 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.80 | 67.0 | 7.03e-01 | 98.8% | 100.0% |
| 3974983 | 3070.1.1.10 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 | 0.79 | 66.0 | 6.73e-01 | 97.6% | 92.5% |
| 1108144 | 3070.1.1.7 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › FecR_C | 0.79 | 66.0 | 6.62e-01 | 97.6% | 89.3% |
| 4087530 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.79 | 62.0 | 6.49e-01 | 97.6% | 94.7% |
| 4846239 | 3070.1.1.12 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd | 0.78 | 68.0 | 6.84e-01 | 100.0% | 94.0% |
| 3503726 | 3070.1.1.8 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › DotD | 0.78 | 66.0 | 6.74e-01 | 100.0% | 95.0% |
| 3966854 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.77 | 65.0 | 6.74e-01 | 96.4% | 97.4% |
| 4809347 | 3070.1.1.16 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 | 0.76 | 63.0 | 6.39e-01 | 100.0% | 91.5% |
| 3948421 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.76 | 65.0 | 6.49e-01 | 100.0% | 91.8% |
| 3970829 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.75 | 67.0 | 6.55e-01 | 100.0% | 91.1% |
| 3972306 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.75 | 66.0 | 6.48e-01 | 100.0% | 91.1% |
| 1070142 | 3070.1.1.11 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 | 0.75 | 65.0 | 6.60e-01 | 98.8% | 97.5% |
| 3966573 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.75 | 66.0 | 6.46e-01 | 100.0% | 91.1% |
| 3967438 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.74 | 65.0 | 6.39e-01 | 100.0% | 91.1% |
| 146928 | 3070.1.1.8 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › DotD | 0.74 | 65.0 | 6.23e-01 | 100.0% | 83.3% |
| 3968711 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.73 | 65.0 | 6.38e-01 | 100.0% | 93.3% |
| 3982238 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.72 | 63.0 | 6.19e-01 | 100.0% | 88.9% |
| 3943692 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.72 | 64.0 | 6.14e-01 | 100.0% | 91.6% |
| 3977381 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.71 | 60.0 | 6.04e-01 | 100.0% | 92.9% |
| 1124160 | 3070.1.1.9 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Caud_bapl16_2nd | 0.68 | 60.0 | 5.59e-01 | 100.0% | 89.5% |
| 4952886 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.63 | 44.0 | 3.97e-01 | 72.3% | 91.3% |
| 4957408 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.61 | 42.0 | 3.93e-01 | 71.1% | 98.1% |
| 3164685 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.60 | 48.0 | 4.01e-01 | 86.7% | 71.7% |
| 5023739 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.60 | 41.0 | 3.88e-01 | 72.3% | 100.0% |
| 4930178 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.60 | 41.0 | 3.79e-01 | 71.1% | 92.7% |
| 4937870 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.60 | 41.0 | 3.96e-01 | 71.1% | 100.0% |
| 5080834 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.59 | 41.0 | 3.85e-01 | 72.3% | 97.1% |
| 4972484 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.59 | 41.0 | 3.85e-01 | 72.3% | 98.1% |
| 5040415 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.58 | 40.0 | 3.79e-01 | 72.3% | 99.0% |
| 4938780 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.58 | 40.0 | 3.85e-01 | 71.1% | 96.8% |
| 4481648 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.58 | 41.0 | 3.64e-01 | 98.8% | 50.8% |
| 4602558 | 3019.1.1.1 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN | 0.58 | 44.0 | 3.88e-01 | 100.0% | 55.8% |
| 4965522 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.57 | 40.0 | 3.68e-01 | 72.3% | 95.5% |
| 3502554 | 221.2.1.1 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N | 0.57 | 36.0 | 3.93e-01 | 73.5% | 80.0% |
| 3388254 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.57 | 39.0 | 4.13e-01 | 85.5% | 81.3% |
| 5070744 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.57 | 39.0 | 3.51e-01 | 71.1% | 82.5% |
| 5079022 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.55 | 38.0 | 3.51e-01 | 72.3% | 92.7% |
| 5004331 | 225.2.1.1 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Uncharacterized protein DIP2311 middle domain › Uncharacterized protein DIP2311 middle domain › HATPase_c_4 | 0.53 | 46.0 | 3.26e-01 | 95.2% | 84.3% |
| 4115098 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.52 | 40.0 | 3.98e-01 | 85.5% | 82.4% |
| 3733936 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.51 | 45.0 | 3.54e-01 | 98.8% | 77.2% |
| 3796780 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.51 | 42.0 | 3.02e-01 | 95.2% | 81.1% |
| 1823111 | 304.126.1.4 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C › V_ATPase_I_N | 0.50 | 32.0 | 3.14e-01 | 88.0% | 58.7% |
D5
medium
residues 177-200_295-354
Domain cluster:
rep: IMGVR_UViG_3300009618_000029-3300009618-Ga0116127_100074338__D532-550_611-692
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06605.19 best | Prophage_tail | 30.2 | 6.00e-07 | 71.4% | 39.1% |
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.78 | 70.0 | 6.77e-01 | 98.8% | 94.7% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.76 | 71.0 | 5.47e-01 | 100.0% | 51.1% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.69 | 57.0 | 5.08e-01 | 98.8% | 64.1% |
| 2wzpR01 | 2.30.300.20 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 | 0.67 | 56.0 | 4.29e-01 | 100.0% | 39.8% |
| 3iuwA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.66 | 56.0 | 5.78e-01 | 100.0% | 97.5% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.64 | 52.0 | 5.07e-01 | 94.0% | 79.6% |
| 4l8jA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.63 | 48.0 | 4.65e-01 | 95.2% | 72.6% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.62 | 40.0 | 3.91e-01 | 73.8% | 59.3% |
| 3cnrB00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.62 | 50.0 | 4.92e-01 | 98.8% | 80.6% |
| 2kvoA01 | 2.40.30.220 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 | 0.61 | 50.0 | 4.75e-01 | 95.2% | 74.0% |
| 3cr8A01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.61 | 53.0 | 4.52e-01 | 97.6% | 74.5% |
| 5gj7A02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.60 | 51.0 | 4.95e-01 | 94.0% | 89.4% |
| 2gksB01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.60 | 52.0 | 4.39e-01 | 96.4% | 90.8% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 49.0 | 4.23e-01 | 97.6% | 58.8% |
| 4rm7A02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.58 | 50.0 | 4.61e-01 | 97.6% | 82.6% |
| 3vseA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.58 | 41.0 | 4.50e-01 | 95.2% | 91.3% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.57 | 48.0 | 4.51e-01 | 96.4% | 76.0% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.57 | 50.0 | 4.64e-01 | 97.6% | 82.9% |
| 6wy9B02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.56 | 46.0 | 4.50e-01 | 94.0% | 93.7% |
| 2ix5A02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.56 | 48.0 | 4.47e-01 | 98.8% | 88.8% |
| 3s9xA00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.55 | 48.0 | 3.97e-01 | 100.0% | 81.1% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 38.0 | 3.93e-01 | 90.5% | 76.2% |
| 1jz7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 3.77e-01 | 86.9% | 64.3% |
| 6vbkA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.51 | 45.0 | 4.16e-01 | 100.0% | 80.2% |
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.50 | 40.0 | 3.71e-01 | 86.9% | 78.2% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031753 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.84 | 75.0 | 7.17e-01 | 100.0% | 84.2% |
| 4033372 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.84 | 77.0 | 6.92e-01 | 97.6% | 78.2% |
| 4929759 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.83 | 75.0 | 5.97e-01 | 98.8% | 98.1% |
| 3590379 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.80 | 75.0 | 7.32e-01 | 100.0% | 96.7% |
| 4647050 | 1.1.13.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ | 0.79 | 67.0 | 6.87e-01 | 98.8% | 95.0% |
| 4033714 | 1.1.13.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tail | 0.79 | 73.0 | 6.99e-01 | 100.0% | 90.5% |
| 3945543 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.79 | 69.0 | 6.93e-01 | 98.8% | 92.9% |
| 5041375 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 71.0 | 6.91e-01 | 100.0% | 92.2% |
| 2475125 | 3071.1.1.7 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › PF30637 | 0.76 | 66.0 | 5.32e-01 | 95.2% | 91.1% |
| 4889790 | 3071.1.1.7 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › PF30637 | 0.76 | 68.0 | 5.44e-01 | 100.0% | 96.4% |
| 4995816 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 69.0 | 6.61e-01 | 98.8% | 94.7% |
| 4957568 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 69.0 | 6.95e-01 | 100.0% | 98.8% |
| 3973341 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 66.0 | 6.66e-01 | 100.0% | 95.3% |
| 3720023 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 57.0 | 5.41e-01 | 96.4% | 72.0% |
| 3970513 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.70 | 52.0 | 5.22e-01 | 94.0% | 77.6% |
| 3982237 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 55.0 | 5.57e-01 | 85.7% | 85.9% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.69 | 60.0 | 5.52e-01 | 97.6% | 96.4% |
| 3974181 | 1.1.5.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PF29489 | 0.68 | 55.0 | 5.39e-01 | 98.8% | 80.0% |
| 4453032 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.67 | 50.0 | 4.73e-01 | 96.4% | 67.0% |
| 5049368 | 205.1.1.1 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 | 0.66 | 50.0 | 4.15e-01 | 84.5% | 45.3% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.66 | 53.0 | 4.69e-01 | 94.0% | 60.8% |
| 3353869 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.66 | 51.0 | 5.14e-01 | 84.5% | 94.1% |
| 3505373 | 11.1.3.4 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Cu,Zn superoxide dismutase-like › CHRD | 0.65 | 54.0 | 4.74e-01 | 90.5% | 67.2% |
| 3936663 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 57.0 | 4.98e-01 | 96.4% | 75.2% |
| 4232299 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.62 | 54.0 | 5.20e-01 | 96.4% | 100.0% |
| 4943219 | 205.1.1.123 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer2_BFD | 0.62 | 51.0 | 4.16e-01 | 89.3% | 76.8% |
| 3837954 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.62 | 50.0 | 4.82e-01 | 96.4% | 77.9% |
| 4323001 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.61 | 53.0 | 5.02e-01 | 97.6% | 97.0% |
| 3290365 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.61 | 49.0 | 4.40e-01 | 100.0% | 62.5% |
| 4954540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.60 | 53.0 | 4.81e-01 | 95.2% | 92.7% |
| 4246654 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.60 | 52.0 | 4.90e-01 | 96.4% | 95.0% |
| 3266207 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 46.0 | 4.22e-01 | 91.7% | 61.7% |
| 4089549 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.60 | 52.0 | 4.99e-01 | 97.6% | 100.0% |
| 4597893 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.59 | 51.0 | 4.86e-01 | 98.8% | 96.0% |
| 1481962 | 4052.1.1.1 ↗ | beta complex topology › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA dehydrogenase middle domain-like › Acyl-CoA_dh_M | 0.58 | 51.0 | 4.85e-01 | 100.0% | 90.1% |
| 5004529 | 1.1.9.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF28530 | 0.58 | 49.0 | 4.41e-01 | 96.4% | 67.0% |
| 3399034 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 46.0 | 3.78e-01 | 89.3% | 50.6% |
| 3277296 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.58 | 46.0 | 4.03e-01 | 86.9% | 59.2% |
| 5030334 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 42.0 | 3.84e-01 | 86.9% | 58.2% |
| 3455361 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 47.0 | 4.45e-01 | 96.4% | 77.1% |
| 3267591 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 43.0 | 3.73e-01 | 85.7% | 63.7% |
| 3271538 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 4.03e-01 | 91.7% | 66.4% |
| 3180219 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.54 | 44.0 | 3.90e-01 | 86.9% | 66.7% |
| 3821402 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 45.0 | 4.13e-01 | 94.0% | 78.2% |
| 3967111 | 3338.2.1.2 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB › BamI_lipocalin | 0.51 | 40.0 | 3.55e-01 | 85.7% | 88.8% |
D6
medium
residues 201-294
Domain cluster:
rep: OM735687.1__UNY50236.1__X__00015__D227-299
D7
medium
residues 391-451
Domain cluster:
rep: IMGVR_UViG_3300017949_000213-3300017949-Ga0181584_100026451__D247-300
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kw2A01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.72 | 48.0 | 4.70e-01 | 70.5% | 97.1% |
| 3ktzA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.66 | 50.0 | 3.70e-01 | 83.6% | 85.7% |
| 1z85A01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.65 | 44.0 | 4.33e-01 | 70.5% | 97.0% |
| 1nioA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.65 | 47.0 | 3.50e-01 | 77.0% | 88.3% |
| 5h1kB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 46.0 | 2.93e-01 | 77.0% | 96.1% |
| 5c5cA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 48.0 | 3.48e-01 | 78.7% | 29.9% |
| 1y7eA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.64 | 53.0 | 3.49e-01 | 95.1% | 64.7% |
| 3h5kA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.64 | 49.0 | 3.56e-01 | 83.6% | 63.8% |
| 4za3A01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.63 | 48.0 | 3.59e-01 | 83.6% | 63.2% |
| 3q0xA01 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.62 | 47.0 | 3.51e-01 | 82.0% | 51.0% |
| 2i2lA01 | 2.10.70.50 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.61 | 45.0 | 4.84e-01 | 77.0% | 96.2% |
| 1emsA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.61 | 46.0 | 3.05e-01 | 83.6% | 84.5% |
| 3varA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.60 | 51.0 | 3.33e-01 | 100.0% | 66.4% |
| 4dt4A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.59 | 40.0 | 4.15e-01 | 70.5% | 78.9% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.58 | 43.0 | 3.58e-01 | 78.7% | 60.2% |
| 2uzzA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.58 | 48.0 | 3.51e-01 | 96.7% | 64.4% |
| 1nijA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 42.0 | 2.98e-01 | 78.7% | 68.2% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 40.0 | 4.08e-01 | 77.0% | 78.9% |
| 4kzsA03 | 3.30.160.710 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 38.0 | 3.34e-01 | 70.5% | 62.9% |
| 2af5A02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.56 | 47.0 | 3.77e-01 | 100.0% | 95.7% |
| 3c7fA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 38.0 | 2.44e-01 | 72.1% | 35.4% |
| 2jkbA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 37.0 | 2.36e-01 | 70.5% | 24.0% |
| 2qcuA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.54 | 44.0 | 3.36e-01 | 95.1% | 72.7% |
| 2q6iA02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.54 | 37.0 | 3.18e-01 | 78.7% | 42.7% |
| 2zbvC02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.54 | 36.0 | 3.19e-01 | 80.3% | 43.1% |
| 3kt4A02 | 3.60.130.20 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Oxoglutarate/iron-dependent oxygenase, C-terminal degradation domain | 0.53 | 41.0 | 2.65e-01 | 86.9% | 50.9% |
| 3f1sA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 37.0 | 2.88e-01 | 75.4% | 99.3% |
| 1eurA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 39.0 | 2.53e-01 | 85.2% | 93.1% |
| 2cw5A02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.53 | 35.0 | 3.21e-01 | 75.4% | 48.3% |
| 3a57A00 | 2.60.270.30 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Vibrio parahaemolyticus thermostable direct hemolysin | 0.53 | 36.0 | 2.83e-01 | 73.8% | 54.5% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 39.0 | 3.17e-01 | 83.6% | 47.3% |
| 3dcxA00 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.52 | 36.0 | 3.07e-01 | 77.0% | 76.9% |
| 5hx0A00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 37.0 | 2.33e-01 | 78.7% | 38.9% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.51 | 36.0 | 3.13e-01 | 75.4% | 53.1% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4340002 | 1.1.9.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_4 | 0.76 | 51.0 | 4.90e-01 | 70.5% | 98.6% |
| 3941378 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.74 | 52.0 | 4.48e-01 | 73.8% | 65.3% |
| 3394097 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.73 | 49.0 | 4.16e-01 | 70.5% | 78.0% |
| 3639565 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.72 | 53.0 | 3.17e-01 | 77.0% | 13.4% |
| 5044746 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.71 | 48.0 | 3.42e-01 | 70.5% | 41.7% |
| 4497835 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 51.0 | 3.48e-01 | 86.9% | 46.5% |
| 3643787 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.64 | 44.0 | 2.72e-01 | 70.5% | 28.7% |
| 4018411 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.63 | 57.0 | 3.32e-01 | 100.0% | 28.7% |
| 3592440 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.62 | 51.0 | 3.29e-01 | 95.1% | 68.4% |
| 3726946 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.62 | 43.0 | 3.48e-01 | 72.1% | 89.6% |
| 4505321 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.60 | 42.0 | 4.43e-01 | 73.8% | 81.8% |
| 4006301 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.59 | 40.0 | 4.18e-01 | 70.5% | 81.8% |
| 3949006 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.59 | 41.0 | 2.64e-01 | 72.1% | 47.5% |
| 3372169 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.59 | 41.0 | 3.29e-01 | 72.1% | 93.0% |
| 5033424 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.58 | 42.0 | 4.26e-01 | 75.4% | 76.7% |
| 3613739 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 49.0 | 2.76e-01 | 100.0% | 9.5% |
| 3811997 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.55 | 44.0 | 3.27e-01 | 86.9% | 96.1% |
| 3823001 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.55 | 41.0 | 3.40e-01 | 78.7% | 63.6% |
| 3518153 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.55 | 44.0 | 3.83e-01 | 98.4% | 59.1% |
| 3882163 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 40.0 | 2.66e-01 | 77.0% | 95.3% |
| 3641336 | 2003.1.5.353 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PIP5K | 0.55 | 39.0 | 2.76e-01 | 77.0% | 23.4% |
| 3701625 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.55 | 33.0 | 3.66e-01 | 70.5% | 80.0% |
| 4961396 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.54 | 36.0 | 2.43e-01 | 70.5% | 32.5% |
| 4996262 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.54 | 37.0 | 3.14e-01 | 78.7% | 41.9% |
| 4491683 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.54 | 43.0 | 3.52e-01 | 90.2% | 69.2% |
| 3201717 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.53 | 39.0 | 2.97e-01 | 82.0% | 77.6% |
| 3882656 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 42.0 | 2.66e-01 | 90.2% | 22.3% |
| 4018269 | 633.1.1.0 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain | 0.52 | 43.0 | 3.07e-01 | 93.4% | 85.1% |
| 4965851 | 4100.1.1.9 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF7387 | 0.51 | 38.0 | 4.03e-01 | 80.3% | 98.2% |
| 3506274 | 331.2.1.7 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM1_C_vert_fung | 0.51 | 41.0 | 3.29e-01 | 90.2% | 76.0% |
| 4993721 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.50 | 37.0 | 2.55e-01 | 80.3% | 38.7% |
| 3657857 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.50 | 39.0 | 2.59e-01 | 85.2% | 84.4% |
D8
medium
residues 754-822
Domain cluster:
rep: IMGVR_UViG_3300014040_000006-3300014040-Ga0117811_100027527__D293-345
D9
medium
residues 1271-1336
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3witA00 | 2.20.220.20 | Mainly Beta › Single Sheet › Glycosyl hydrolase fold › | 0.74 | 49.0 | 4.99e-01 | 77.3% | 70.3% |
| 1tl2A00 | 2.115.10.10 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Tachylectin 2 | 0.63 | 49.0 | 3.35e-01 | 83.3% | 38.3% |
| 6qp7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.63 | 48.0 | 2.89e-01 | 83.3% | 23.5% |
| 2f09A00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.62 | 38.0 | 3.57e-01 | 71.2% | 48.8% |
| 3vsmA03 | 2.60.40.4340 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 46.0 | 4.08e-01 | 80.3% | 98.9% |
| 4guzA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.60 | 44.0 | 3.18e-01 | 77.3% | 60.2% |
| 4g7nA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.60 | 45.0 | 3.78e-01 | 83.3% | 63.6% |
| 4nsxA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 46.0 | 3.02e-01 | 84.8% | 42.2% |
| 2i0rA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 45.0 | 2.87e-01 | 83.3% | 30.2% |
| 2bszA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.59 | 43.0 | 3.19e-01 | 77.3% | 73.5% |
| 3lp9A00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.59 | 45.0 | 3.13e-01 | 83.3% | 44.1% |
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.59 | 43.0 | 3.19e-01 | 78.8% | 83.1% |
| 1w4tA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.59 | 42.0 | 3.14e-01 | 77.3% | 71.9% |
| 1jqpA01 | 2.40.128.80 | Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain | 0.59 | 42.0 | 3.56e-01 | 75.8% | 91.1% |
| 1xffA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.59 | 41.0 | 2.76e-01 | 72.7% | 32.8% |
| 5xnrA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 45.0 | 3.06e-01 | 83.3% | 40.9% |
| 7uhyA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 44.0 | 2.93e-01 | 84.8% | 26.5% |
| 1w5rA01 | 3.30.2140.10 | Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase | 0.58 | 42.0 | 3.12e-01 | 77.3% | 74.0% |
| 2w2jA00 | 3.10.200.10 | Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase | 0.58 | 39.0 | 2.65e-01 | 71.2% | 34.0% |
| 3ip3A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.58 | 40.0 | 2.84e-01 | 72.7% | 64.5% |
| 1uaiA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 44.0 | 3.09e-01 | 83.3% | 41.3% |
| 2jpiA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.58 | 44.0 | 3.92e-01 | 83.3% | 68.8% |
| 3b77A01 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.58 | 41.0 | 3.56e-01 | 74.2% | 92.0% |
| 2ovsA00 | 2.40.128.380 | Mainly Beta › Beta Barrel › Lipocalin › T3SS negative regulator GrlR | 0.57 | 43.0 | 3.56e-01 | 80.3% | 55.9% |
| 5kvsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.56 | 46.0 | 3.49e-01 | 90.9% | 84.6% |
| 2xn1A01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.56 | 45.0 | 2.99e-01 | 93.9% | 21.6% |
| 3kifD00 | 2.20.25.650 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Tachylectin-2-like | 0.56 | 40.0 | 3.60e-01 | 75.8% | 59.3% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 42.0 | 3.39e-01 | 80.3% | 47.2% |
| 5m8cB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 39.0 | 2.52e-01 | 74.2% | 31.9% |
| 4czxA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 41.0 | 2.72e-01 | 84.8% | 25.3% |
| 1hxnA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.55 | 41.0 | 2.97e-01 | 83.3% | 46.2% |
| 5k19A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 45.0 | 2.87e-01 | 95.5% | 37.0% |
| 2cwsA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 42.0 | 2.89e-01 | 83.3% | 44.9% |
| 3obaA05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 46.0 | 3.08e-01 | 100.0% | 65.9% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.53 | 39.0 | 3.62e-01 | 81.8% | 85.2% |
| 2gcjA01 | 2.30.29.150 | Mainly Beta › Roll › PH-domain like › | 0.52 | 38.0 | 3.11e-01 | 77.3% | 53.0% |
| 2zagA02 | 2.40.128.390 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 40.0 | 3.76e-01 | 84.8% | 68.7% |
| 3afcA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 44.0 | 2.68e-01 | 95.5% | 60.6% |
| 2z0fA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.52 | 38.0 | 3.28e-01 | 77.3% | 67.6% |
| 3hl6A01 | 3.30.1300.50 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Putative mobile pathogenicity island, N-terminal domain | 0.52 | 39.0 | 3.77e-01 | 80.3% | 98.6% |
| 3dxqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 35.0 | 3.24e-01 | 72.7% | 63.9% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1124190 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.74 | 49.0 | 4.99e-01 | 77.3% | 70.3% |
| 3287367 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.70 | 51.0 | 3.27e-01 | 75.8% | 46.0% |
| 3271259 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.67 | 47.0 | 4.29e-01 | 74.2% | 56.5% |
| 4302938 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.66 | 47.0 | 4.30e-01 | 81.8% | 57.6% |
| 3976843 | 9.11.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC | 0.65 | 39.0 | 3.54e-01 | 71.2% | 43.8% |
| 3668896 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 49.0 | 2.95e-01 | 83.3% | 16.7% |
| 3873966 | 5.1.4.277 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EIPR1 | 0.64 | 50.0 | 3.10e-01 | 84.8% | 31.9% |
| None | — | 0.64 | 46.0 | 2.82e-01 | 75.8% | 36.8% | |
| 3517194 | 109.54.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 | 0.63 | 49.0 | 2.90e-01 | 83.3% | 15.9% |
| 5039580 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 49.0 | 3.08e-01 | 84.8% | 24.4% |
| 3281771 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.63 | 47.0 | 3.97e-01 | 78.8% | 59.1% |
| 3617898 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.63 | 54.0 | 4.14e-01 | 93.9% | 47.6% |
| 3190113 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 48.0 | 3.15e-01 | 84.8% | 38.4% |
| 3169693 | 5.1.4.80 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Utp8_b_propeller | 0.63 | 48.0 | 3.00e-01 | 83.3% | 23.3% |
| 3265516 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.62 | 48.0 | 3.14e-01 | 84.8% | 33.8% |
| 4028913 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 48.0 | 2.94e-01 | 83.3% | 22.8% |
| 3492308 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.62 | 47.0 | 2.92e-01 | 83.3% | 20.8% |
| 3253551 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.62 | 45.0 | 2.96e-01 | 77.3% | 78.4% |
| 3632998 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.61 | 47.0 | 2.90e-01 | 83.3% | 39.0% |
| 3884108 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.60 | 44.0 | 2.89e-01 | 77.3% | 86.3% |
| 3248113 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.60 | 43.0 | 2.86e-01 | 77.3% | 77.4% |
| 2028069 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.59 | 42.0 | 3.24e-01 | 74.2% | 87.1% |
| 5054848 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.59 | 46.0 | 4.05e-01 | 84.8% | 77.0% |
| 3393936 | 5.1.4.276 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR75_2nd | 0.59 | 51.0 | 3.25e-01 | 100.0% | 28.5% |
| 3582180 | 5.1.3.221 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_WDR36-Utp21_1st | 0.59 | 45.0 | 3.40e-01 | 84.8% | 42.8% |
| 3568386 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.59 | 45.0 | 2.99e-01 | 81.8% | 53.2% |
| 4957570 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.59 | 50.0 | 3.96e-01 | 93.9% | 52.6% |
| 1141835 | 220.1.1.17 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_1 | 0.59 | 41.0 | 3.36e-01 | 72.7% | 76.0% |
| 3339984 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 42.0 | 3.47e-01 | 75.8% | 92.5% |
| 3534783 | 11.1.1.787 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ITI_HC_C | 0.59 | 44.0 | 3.01e-01 | 81.8% | 29.4% |
| 3621626 | 5.1.4.61 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N | 0.59 | 44.0 | 2.85e-01 | 84.8% | 22.3% |
| 3966067 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.58 | 42.0 | 2.79e-01 | 77.3% | 81.4% |
| 3890969 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.58 | 40.0 | 2.67e-01 | 72.7% | 75.9% |
| 3974608 | 7515.1.1.0 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like | 0.58 | 44.0 | 2.74e-01 | 83.3% | 77.2% |
| 3741169 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.58 | 45.0 | 2.95e-01 | 86.4% | 41.7% |
| None | — | 0.58 | 49.0 | 2.94e-01 | 100.0% | 39.4% | |
| 3389476 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.57 | 46.0 | 3.45e-01 | 86.4% | 90.6% |
| None | — | 0.57 | 50.0 | 2.98e-01 | 100.0% | 39.2% | |
| 3789793 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 47.0 | 2.67e-01 | 92.4% | 10.2% |
| 3921085 | 220.1.1.151 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_MRCK | 0.57 | 41.0 | 3.25e-01 | 75.8% | 91.9% |
| 4000029 | 5.1.4.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 | 0.57 | 48.0 | 3.15e-01 | 100.0% | 32.0% |
| 4234211 | 3111.1.1.0 ↗ | beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain | 0.57 | 39.0 | 3.62e-01 | 72.7% | 61.2% |
| 3790115 | 5.1.4.341 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd | 0.56 | 47.0 | 2.94e-01 | 92.4% | 21.3% |
| 4408605 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.56 | 47.0 | 3.42e-01 | 90.9% | 42.8% |
| 3506401 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 43.0 | 2.82e-01 | 86.4% | 26.1% |
| 3697914 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.55 | 39.0 | 2.53e-01 | 75.8% | 77.6% |
| 3221443 | 5.1.4.61 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PAN2_N | 0.55 | 46.0 | 2.97e-01 | 98.5% | 33.0% |
| 3935039 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 38.0 | 3.04e-01 | 74.2% | 67.1% |
| 3936499 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 44.0 | 2.53e-01 | 100.0% | 13.0% |
| 4957801 | 12.3.1.40 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N | 0.52 | 41.0 | 2.93e-01 | 87.9% | 59.5% |
| 3576490 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 43.0 | 2.48e-01 | 98.5% | 12.6% |
| 3900153 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.50 | 44.0 | 3.19e-01 | 95.5% | 57.1% |