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KJ628499.1__AJK27175.1__phiAbaA1_072__00072

Bact-Vir

KJ628499.1__AJK27175.1__phiAbaA1_072__00072

Identity

Accession:
KJ628499 ↗
Kingdom:
phage

Quality

78.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Saclayvirus› Acinetobacter_phage_vB_AbaM_phiAbaA1

TaxID: 1605379

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-46_144-330
PDB
Domain cluster: rep: NC_047778.1__YP_009787320.1__QLL94_gp20__00020__D40-226
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pmwA02 2.40.50.700 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 26.0 4.20e-01 70.1% 98.7%
3k59A01 2.40.50.590 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel 0.60 27.0 4.01e-01 73.8% 100.0%
1gd7A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 27.0 3.77e-01 70.6% 88.1%
4owwB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 28.0 3.80e-01 85.0% 93.5%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964606 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 59.0 6.64e-01 89.3% 100.0%
4213053 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 28.0 4.12e-01 72.0% 91.6%
3285635 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 27.0 3.96e-01 70.1% 95.8%
3287532 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 27.0 3.83e-01 71.0% 91.0%
317158 2.1.1.16 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.58 28.0 3.79e-01 70.1% 86.5%
5055355 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 25.0 3.72e-01 70.1% 100.0%
5012082 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 26.0 3.73e-01 71.0% 100.0%
5060933 2.1.1.111 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.52 27.0 3.65e-01 85.5% 98.1%
5030363 2.1.1.80 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB 0.52 26.0 3.54e-01 72.0% 91.8%
3931744 2.1.1.141 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › WCOB 0.50 28.0 3.24e-01 72.4% 74.7%
D2 high residues 49-132
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g7sA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 49.0 3.65e-01 81.0% 92.8%
1q9jB01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.54 42.0 3.17e-01 84.5% 83.6%
5c0oH00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 41.0 3.13e-01 88.1% 57.8%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4958445 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.54 37.0 3.17e-01 71.4% 93.8%
3950357 2003.1.5.69 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GCD14 0.54 43.0 3.28e-01 89.3% 48.4%
None — 0.52 46.0 2.92e-01 100.0% 81.2%
3179538 2003.1.3.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.52 38.0 2.51e-01 79.8% 97.8%
4225586 2003.1.7.10 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › Rib_5-P_isom_A 0.51 38.0 3.21e-01 82.1% 87.5%
136031 7501.1.1.1 ↗ a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › DHFR_1 0.51 38.0 2.95e-01 82.1% 97.7%
4597930 2003.1.5.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 0.51 41.0 2.54e-01 91.7% 30.7%
5067129 2003.1.5.69 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GCD14 0.51 39.0 3.11e-01 85.7% 86.3%
5008301 2003.1.5.69 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GCD14 0.51 40.0 3.17e-01 88.1% 86.3%