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KJ628499.1__AJK27228.1__phiAbaA1_125__00125

Bact-Vir

KJ628499.1__AJK27228.1__phiAbaA1_125__00125

Identity

Accession:
KJ628499 ↗
Kingdom:
phage

Quality

91.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Saclayvirus› Acinetobacter_phage_vB_AbaM_phiAbaA1

TaxID: 1605379

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-72
PDB
Domain cluster: rep: NC_048080.1__YP_009813978.1__HOU35_gp053__00124__D2-70
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 51.0 5.31e-01 100.0% 90.9%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 51.0 5.31e-01 100.0% 93.8%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.65 43.0 4.25e-01 100.0% 63.6%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 35.0 4.04e-01 73.2% 75.5%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.61 41.0 4.41e-01 98.6% 86.2%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.58 38.0 4.16e-01 100.0% 88.9%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.56 48.0 4.29e-01 97.2% 100.0%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.55 40.0 4.36e-01 94.4% 100.0%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 37.0 2.77e-01 71.8% 64.4%
1gd5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.53 38.0 3.20e-01 77.5% 70.0%
2jzlA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.53 45.0 3.92e-01 97.2% 80.2%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 43.0 3.73e-01 95.8% 95.9%
2kr7A02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.51 30.0 3.28e-01 80.3% 71.9%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 42.0 3.58e-01 95.8% 94.3%
4ak1A02 2.30.30.1270 Mainly Beta › Roll › SH3 type barrels. › 0.50 35.0 3.70e-01 74.6% 85.9%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.50 40.0 3.32e-01 90.1% 59.1%
1o75A03 2.60.40.1300 Mainly Beta › Sandwich › Immunoglobulin-like › Penicillin-binding protein Tp47, domain C 0.50 35.0 2.97e-01 74.6% 95.3%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.50 40.0 3.36e-01 93.0% 74.3%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4031151 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.65 51.0 5.07e-01 100.0% 81.3%
3482680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 51.0 5.29e-01 100.0% 92.3%
3479042 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 49.0 4.93e-01 97.2% 82.9%
3942573 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 44.0 4.72e-01 100.0% 89.7%
3207081 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.62 48.0 5.04e-01 95.8% 92.3%
5044391 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 40.0 4.59e-01 83.1% 98.0%
3587789 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.58 39.0 3.43e-01 91.5% 46.7%
6235 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.57 34.0 2.58e-01 71.8% 22.0%
4966092 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.57 36.0 3.04e-01 76.1% 37.1%
5044394 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 35.0 4.14e-01 83.1% 100.0%
4380962 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.56 36.0 3.25e-01 88.7% 43.8%
5078248 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.54 34.0 3.49e-01 80.3% 64.3%
4832853 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 40.0 3.95e-01 95.8% 77.3%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 36.0 3.53e-01 100.0% 62.5%
3483288 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 41.0 3.40e-01 91.5% 46.2%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.53 38.0 3.91e-01 100.0% 83.1%
4256610 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 44.0 3.55e-01 95.8% 90.3%
3626321 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.52 32.0 3.56e-01 70.4% 80.0%
3964664 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.51 35.0 3.56e-01 81.7% 75.0%
3664617 2.1.1.223 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 0.51 41.0 3.89e-01 90.1% 82.4%
3830352 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.50 42.0 4.03e-01 100.0% 78.8%
3337303 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 36.0 3.56e-01 74.6% 72.0%
5032255 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 37.0 3.79e-01 93.0% 81.4%