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KJ668716.1__AII27427.1__X__00021

Bact-Vir

KJ668716.1__AII27427.1__X__00021

Identity

Accession:
KJ668716 ↗
Kingdom:
phage

Quality

82.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Pecentumvirus› Listeria_phage_LMTA-34

TaxID: 1486397

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-70
PDB
Domain cluster: representative
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 56.0 6.00e-01 100.0% 90.2%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 61.0 6.28e-01 100.0% 87.7%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 55.0 5.91e-01 100.0% 88.5%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 59.0 6.29e-01 100.0% 96.1%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 55.0 5.17e-01 100.0% 63.0%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 56.0 6.27e-01 95.0% 100.0%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.75 55.0 5.81e-01 100.0% 87.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 60.0 6.34e-01 100.0% 96.2%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 56.0 5.78e-01 100.0% 85.7%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 54.0 5.87e-01 100.0% 100.0%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 59.0 5.38e-01 100.0% 67.5%
7u32F02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.71 56.0 6.06e-01 100.0% 100.0%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 51.0 5.37e-01 100.0% 90.4%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 57.0 4.80e-01 100.0% 55.2%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 53.0 5.49e-01 98.3% 90.9%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 50.0 4.29e-01 100.0% 48.0%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 60.0 5.63e-01 100.0% 80.6%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 59.0 4.83e-01 100.0% 53.7%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 57.0 5.64e-01 100.0% 87.5%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 5.45e-01 100.0% 83.1%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 5.18e-01 100.0% 82.5%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 5.58e-01 100.0% 91.9%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 54.0 5.09e-01 100.0% 76.0%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 5.69e-01 100.0% 96.7%
3nmzD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 54.0 4.80e-01 100.0% 65.5%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 54.0 4.54e-01 100.0% 56.1%
2yrvA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 54.0 4.37e-01 100.0% 49.6%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 56.0 5.05e-01 100.0% 71.6%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 55.0 5.15e-01 100.0% 77.3%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 54.0 5.53e-01 100.0% 96.6%
1y0mA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 54.0 5.38e-01 100.0% 91.8%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 55.0 5.50e-01 100.0% 95.1%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 53.0 5.39e-01 100.0% 98.3%
1zuuA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 52.0 5.39e-01 96.7% 100.0%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 53.0 5.36e-01 100.0% 96.6%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 57.0 5.55e-01 100.0% 92.4%
3i35A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 52.0 5.37e-01 100.0% 100.0%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 53.0 4.94e-01 100.0% 84.6%
1qypA00 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.61 43.0 4.43e-01 90.0% 80.7%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 52.0 5.08e-01 100.0% 88.1%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 53.0 4.99e-01 100.0% 82.4%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.60 48.0 4.98e-01 98.3% 96.4%
6uy8A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 49.0 4.94e-01 100.0% 93.2%
3o2zP00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 47.0 3.82e-01 90.0% 72.4%
2rcfA00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.57 45.0 4.07e-01 86.7% 92.7%
5l37C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.57 46.0 4.05e-01 86.7% 89.5%
1ng2A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 38.0 4.33e-01 75.0% 95.5%
2bm0A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 45.0 3.76e-01 86.7% 77.7%
1twfI02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.57 40.0 3.77e-01 88.3% 59.2%
1mv3A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 49.0 4.63e-01 100.0% 94.6%
2kjxA01 3.30.720.220 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.56 42.0 4.46e-01 83.3% 94.3%
3mxtA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.56 42.0 3.59e-01 81.7% 97.0%
4e2xA01 6.20.50.110 Special › Other non-globular › N-terminal domain of TfIIb › Methyltransferase, zinc-binding domain 0.55 40.0 4.26e-01 80.0% 100.0%
1ufvA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.54 41.0 3.50e-01 81.7% 97.0%
1zy9A03 2.60.40.2760 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 34.0 3.76e-01 90.0% 88.4%
1x0tA02 6.20.50.20 Special › Other non-globular › N-terminal domain of TfIIb › 0.54 37.0 4.11e-01 85.0% 100.0%
4fvdA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 41.0 3.66e-01 91.7% 83.0%
8djfA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 44.0 2.83e-01 96.7% 98.9%
2gfoA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 40.0 2.49e-01 86.7% 91.4%
7jptA01 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.51 42.0 3.47e-01 100.0% 89.4%
1fvuB00 3.10.100.10 Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A 0.50 43.0 3.51e-01 100.0% 81.0%
2psmC01 2.20.28.230 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.50 32.0 3.44e-01 70.0% 76.9%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4963650 4.1.1.488 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7346 0.88 59.0 6.17e-01 100.0% 76.4%
3828348 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 61.0 5.92e-01 100.0% 70.8%
4481026 4.1.1.407 ↗ beta barrels › SH3 › SH3 › SH3 › PF29661 0.82 60.0 6.01e-01 100.0% 76.7%
3313119 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.82 60.0 5.36e-01 100.0% 57.5%
3358753 4.1.1.381 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 0.80 58.0 4.11e-01 100.0% 27.9%
3669494 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.78 58.0 4.26e-01 100.0% 31.3%
3356591 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 59.0 4.99e-01 100.0% 50.5%
3251559 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 59.0 6.41e-01 100.0% 98.0%
3317400 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 59.0 4.39e-01 100.0% 34.3%
3256432 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 61.0 6.18e-01 100.0% 85.0%
3620094 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 56.0 5.86e-01 100.0% 83.6%
3261395 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 55.0 5.60e-01 100.0% 77.6%
3451173 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 63.0 5.45e-01 100.0% 58.9%
4093836 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 60.0 6.01e-01 100.0% 85.0%
4306285 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 60.0 5.70e-01 100.0% 74.3%
4890270 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.74 54.0 5.61e-01 100.0% 85.2%
3612090 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 59.0 5.98e-01 100.0% 86.7%
5051313 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 61.0 5.94e-01 100.0% 83.1%
3584224 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 51.0 4.27e-01 100.0% 42.9%
3494671 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 46.0 5.11e-01 90.0% 86.7%
3557649 4.8.1.20 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PWP3A-B_N 0.72 61.0 4.98e-01 100.0% 52.4%
3750522 4.1.1.218 ↗ beta barrels › SH3 › SH3 › SH3 › PWP3A-B_N 0.72 61.0 4.92e-01 100.0% 50.0%
3408588 4.1.1.243 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.72 56.0 5.38e-01 100.0% 72.9%
4138935 4.1.1.241 ↗ beta barrels › SH3 › SH3 › SH3 › NifZ 0.68 62.0 5.77e-01 100.0% 89.3%
3347795 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.68 60.0 5.41e-01 100.0% 72.5%
3441143 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.68 60.0 5.00e-01 100.0% 58.0%
3931160 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 61.0 4.74e-01 100.0% 59.2%
3518287 4.1.1.347 ↗ beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.67 62.0 4.87e-01 100.0% 92.2%
3473981 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.66 60.0 4.64e-01 100.0% 64.0%
3501741 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.66 54.0 5.41e-01 98.3% 88.3%
3826141 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 60.0 5.16e-01 100.0% 75.6%
3925803 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.65 58.0 4.75e-01 100.0% 65.5%
3390533 4.8.1.19 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › WAC_Acf1_DNA_bd 0.65 59.0 4.27e-01 100.0% 39.4%
2834765 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 54.0 5.20e-01 100.0% 79.7%
3849311 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 56.0 5.62e-01 100.0% 95.0%
3482868 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 53.0 5.51e-01 100.0% 100.0%
4851967 4.1.1.32 ↗ beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.64 52.0 5.22e-01 100.0% 88.7%
3817655 4111.1.1.2 ↗ a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC 0.64 57.0 4.48e-01 100.0% 60.8%
3396951 4.1.1.330 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.64 57.0 3.43e-01 100.0% 15.5%
3609256 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 58.0 5.12e-01 100.0% 72.9%
3707929 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 56.0 4.13e-01 100.0% 46.3%
3281618 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.63 56.0 4.75e-01 100.0% 71.0%
3782292 4.1.1.170 ↗ beta barrels › SH3 › SH3 › SH3 › Rad9_Rad53_bind 0.63 56.0 5.12e-01 100.0% 86.3%
3992765 4.1.1.56 ↗ beta barrels › SH3 › SH3 › SH3 › RBB1NT 0.63 57.0 4.68e-01 100.0% 59.0%
3931161 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 55.0 4.44e-01 100.0% 51.3%
4936291 4.1.1.487 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7205 0.63 49.0 4.80e-01 100.0% 78.5%
5054112 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 53.0 5.18e-01 91.7% 87.7%
5032461 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 53.0 5.24e-01 100.0% 90.8%
3435006 4.1.1.308 ↗ beta barrels › SH3 › SH3 › SH3 › PF31073 0.61 52.0 5.12e-01 100.0% 87.7%
3763497 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.61 54.0 5.01e-01 100.0% 85.3%
3893533 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.59 52.0 4.36e-01 96.7% 76.0%
3539840 2.1.1.188 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSDE1 0.58 46.0 4.19e-01 90.0% 98.8%
1933605 2.16.1.1 ↗ beta barrels › OB-fold › EutN/CcmL-like › EutN/CcmL-like › EutN_CcmL 0.57 46.0 4.05e-01 86.7% 89.5%
4116229 283.1.1.3 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase 0.56 43.0 3.61e-01 83.3% 99.0%
3521181 4.1.1.229 ↗ beta barrels › SH3 › SH3 › SH3 0.55 48.0 3.48e-01 100.0% 40.6%
3830500 376.1.2.2 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.55 44.0 4.46e-01 96.7% 93.3%
3900658 209.1.1.1 ↗ a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C 0.55 47.0 3.60e-01 100.0% 72.0%
3670182 2.1.1.1 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.55 44.0 3.48e-01 88.3% 53.6%
4563889 1.1.7.19 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.55 43.0 3.41e-01 85.0% 65.0%
4600912 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 43.0 3.37e-01 86.7% 61.5%
4134860 1.1.7.19 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.54 42.0 3.26e-01 86.7% 57.1%
3736088 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 47.0 3.94e-01 100.0% 95.2%
3268229 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 41.0 3.47e-01 88.3% 55.2%
5059727 5.1.9.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain in ABC toxin B component 0.52 43.0 2.96e-01 95.0% 36.4%
4995921 1.1.7.19 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 0.52 41.0 3.20e-01 100.0% 38.6%
3322837 1.1.8.15 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D2 0.52 42.0 4.20e-01 100.0% 90.0%
3813307 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.51 41.0 2.64e-01 96.7% 97.7%
3166921 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.50 38.0 2.45e-01 85.0% 86.6%
3594831 252.1.1.0 ↗ a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD 0.50 34.0 3.79e-01 95.0% 93.3%
4312001 283.1.1.3 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase 0.50 40.0 3.41e-01 86.7% 77.6%
4358798 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.50 40.0 3.81e-01 93.3% 73.3%
D2 high residues 73-135
PDB
Domain cluster: rep: MK448740.1__QBX17560.1__Javan367_0025__00025__D3-70
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09643.16 best YopX 27.2 4.90e-06 92.1% 32.0%
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p84A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.86 76.0 7.20e-01 98.4% 80.8%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 59.0 6.55e-01 81.0% 100.0%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 61.0 6.43e-01 85.7% 100.0%
2ox7A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.73 67.0 6.51e-01 100.0% 95.7%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.72 66.0 5.61e-01 100.0% 89.9%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 53.0 5.81e-01 77.8% 100.0%
1jb0E00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.72 55.0 5.38e-01 82.5% 100.0%
2ky9A01 2.30.30.1130 Mainly Beta › Roll › SH3 type barrels. › 0.72 55.0 5.43e-01 82.5% 89.6%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 60.0 5.66e-01 96.8% 88.3%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 57.0 5.00e-01 90.5% 75.0%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.68 55.0 4.81e-01 90.5% 63.3%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 55.0 5.67e-01 96.8% 94.9%
2p1gA02 2.30.260.10 Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain 0.67 57.0 4.92e-01 95.2% 98.0%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 49.0 4.69e-01 79.4% 81.3%
1qmyA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.67 49.0 3.70e-01 88.9% 32.1%
4o5vA03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.67 55.0 5.25e-01 93.7% 94.7%
3npfB01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 50.0 5.01e-01 82.5% 98.5%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.66 59.0 4.23e-01 100.0% 82.9%
5z8lA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.65 58.0 4.71e-01 100.0% 73.9%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 4.96e-01 82.5% 87.7%
2uvaG09 2.40.128.700 Mainly Beta › Beta Barrel › Lipocalin › 0.63 47.0 3.95e-01 82.5% 90.5%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 54.0 5.19e-01 95.2% 94.4%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 46.0 4.15e-01 81.0% 87.4%
4hwmA00 2.40.128.500 Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein 0.59 51.0 4.24e-01 100.0% 89.7%
4b3fX02 2.40.30.270 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.59 48.0 4.13e-01 88.9% 94.9%
1z87A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 43.0 3.75e-01 82.5% 85.0%
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 45.0 4.36e-01 95.2% 100.0%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.55 43.0 2.83e-01 93.7% 48.5%
2f09A00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.54 41.0 3.82e-01 84.1% 95.1%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.54 44.0 3.93e-01 95.2% 63.4%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.38e-01 82.5% 68.4%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.53 42.0 3.73e-01 93.7% 91.1%
4n0rA03 2.60.40.3950 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 43.0 3.62e-01 95.2% 81.8%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.50 41.0 3.86e-01 93.7% 98.7%
3gd0A02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.50 42.0 3.58e-01 98.4% 83.0%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3703933 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.80 69.0 6.89e-01 92.1% 100.0%
3598285 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 72.0 6.95e-01 98.4% 98.6%
959119 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.78 60.0 6.40e-01 81.0% 100.0%
3612092 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 57.0 5.35e-01 79.4% 100.0%
3675511 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.75 62.0 5.74e-01 90.5% 76.2%
1117666 4.1.1.103 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12 0.75 64.0 5.75e-01 93.7% 91.8%
3456496 4.1.1.75 ↗ beta barrels › SH3 › SH3 › SH3 › NdhS 0.73 61.0 4.95e-01 90.5% 53.0%
3759446 4.1.1.73 ↗ beta barrels › SH3 › SH3 › SH3 › Cul7 0.73 62.0 5.49e-01 93.7% 83.3%
3585492 4.1.1.103 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12 0.72 66.0 5.42e-01 100.0% 87.3%
3275383 4113.1.1.1 ↗ beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 0.71 57.0 3.91e-01 88.9% 85.5%
3230113 4.1.1.315 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.71 65.0 3.91e-01 100.0% 30.1%
3517415 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.71 59.0 5.85e-01 88.9% 96.9%
3553983 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.71 57.0 5.87e-01 87.3% 100.0%
3598499 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 57.0 4.38e-01 88.9% 100.0%
5046193 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.70 57.0 5.04e-01 88.9% 66.7%
3616007 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.70 54.0 5.73e-01 82.5% 100.0%
4172306 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.69 57.0 4.97e-01 90.5% 64.2%
5037772 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.69 57.0 4.70e-01 90.5% 55.8%
3495880 4.1.1.315 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.69 61.0 3.65e-01 96.8% 29.4%
5068429 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.69 56.0 4.74e-01 88.9% 59.6%
3933047 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.68 58.0 4.28e-01 93.7% 76.9%
3586469 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.68 59.0 5.33e-01 95.2% 78.8%
3502388 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 55.0 5.21e-01 87.3% 74.7%
3481770 4.1.1.220 ↗ beta barrels › SH3 › SH3 › SH3 › BAHCC1-like_Tudor 0.68 61.0 5.59e-01 98.4% 82.5%
4947175 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.68 56.0 4.95e-01 90.5% 65.6%
3924149 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 50.0 5.55e-01 81.0% 100.0%
3416068 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.68 58.0 4.29e-01 93.7% 72.3%
3507338 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.74e-01 90.5% 95.0%
3554026 4.1.1.233 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N 0.67 59.0 6.02e-01 96.8% 100.0%
3908017 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.67 55.0 5.09e-01 88.9% 87.5%
3505711 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.67 57.0 5.15e-01 93.7% 84.7%
3830352 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.67 55.0 5.02e-01 92.1% 94.1%
4044269 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.66 58.0 5.67e-01 100.0% 92.9%
3976351 219.1.1.40 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AmiA-like 0.66 56.0 3.80e-01 95.2% 47.1%
3472726 4.1.1.65 ↗ beta barrels › SH3 › SH3 › SH3 › 53-BP1_Tudor 0.66 57.0 4.53e-01 96.8% 88.0%
3936726 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.62e-01 90.5% 100.0%
3264879 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 53.0 5.12e-01 96.8% 80.0%
3879755 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.65 56.0 4.66e-01 93.7% 76.2%
3650296 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.64 53.0 4.64e-01 92.1% 85.3%
3930456 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 54.0 5.40e-01 98.4% 90.8%
3472332 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 48.0 5.13e-01 81.0% 92.7%
3935130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 49.0 5.23e-01 98.4% 98.2%
3479736 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 46.0 3.92e-01 81.0% 76.1%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.62 54.0 4.87e-01 95.2% 85.9%
3516333 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 50.0 5.27e-01 100.0% 100.0%
3585652 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 41.0 4.25e-01 73.0% 73.3%
3729666 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 53.0 4.44e-01 98.4% 68.2%
5029031 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 5.12e-01 95.2% 98.3%
3705575 220.1.1.128 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SPT16 0.59 44.0 3.35e-01 82.5% 74.5%
3478678 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 44.0 4.25e-01 82.5% 98.7%
3611022 73.1.1.0 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain 0.58 48.0 4.35e-01 92.1% 95.3%
4625374 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.57 47.0 3.19e-01 90.5% 32.2%
3741960 5.1.4.242 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.57 41.0 2.63e-01 77.8% 37.9%
3933782 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.56 47.0 4.35e-01 98.4% 89.4%
4429352 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 47.0 4.21e-01 95.2% 90.0%
3257607 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 46.0 4.41e-01 98.4% 100.0%
3258463 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 48.0 4.54e-01 100.0% 97.3%
2127918 10.2.1.43 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat_C 0.54 46.0 3.03e-01 98.4% 35.1%
3239076 389.1.2.0 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.54 42.0 4.43e-01 93.7% 100.0%
3704121 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.53 35.0 3.65e-01 85.7% 74.1%
3244743 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.52 43.0 3.35e-01 95.2% 78.0%
3439608 5.1.4.219 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DPPIV_N 0.50 38.0 2.42e-01 85.7% 41.2%
3258651 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.50 36.0 2.23e-01 77.8% 20.4%