←Back to structures

KJ676859.1__AID17913.1__JBP901_gp201__00201

Bact-Vir

KJ676859.1__AID17913.1__JBP901_gp201__00201

Identity

Accession:
KJ676859 ↗
Kingdom:
phage

Quality

91.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Caeruleovirus› Bacillus_phage_JBP901

TaxID: 1498212

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 107-165
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gccA00 3.30.730.10 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › AP2/ERF domain 0.90 78.0 7.67e-01 98.3% 87.3%
7wq5A01 3.30.730.10 Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › AP2/ERF domain 0.89 78.0 7.95e-01 98.3% 94.8%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.68 51.0 4.10e-01 81.4% 92.4%
2azeB00 6.10.250.540 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.64 29.0 2.39e-01 72.9% 22.8%
1ciaA00 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.64 49.0 3.40e-01 84.7% 34.3%
2atzA00 3.90.920.20 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › HP0184-like 0.62 53.0 3.83e-01 98.3% 51.1%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.62 43.0 3.18e-01 74.6% 29.2%
2i9yA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 44.0 3.33e-01 78.0% 93.0%
2i9dA00 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.61 46.0 3.20e-01 83.1% 34.3%
4p1mB01 3.30.160.880 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain 0.59 38.0 4.14e-01 72.9% 86.7%
1kqrA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 48.0 3.68e-01 98.3% 63.1%
3g1nA02 3.30.2160.10 Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain 0.59 42.0 3.84e-01 84.7% 56.2%
3l60A01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.59 45.0 3.11e-01 84.7% 33.6%
4yg6B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 46.0 3.58e-01 96.6% 62.0%
1i24A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 51.0 3.41e-01 100.0% 57.6%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 41.0 2.96e-01 76.3% 82.6%
6tmfI00 1.10.455.10 Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 0.57 44.0 3.06e-01 84.7% 57.5%
4ic1D00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.57 39.0 2.74e-01 72.9% 44.7%
2hj1A00 3.10.20.280 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like 0.56 40.0 3.80e-01 88.1% 62.3%
2xzmG00 1.10.455.10 Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 0.56 43.0 3.05e-01 84.7% 55.7%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.55 42.0 2.78e-01 84.7% 78.1%
2memA00 3.90.1150.190 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › SLED domain 0.55 47.0 3.78e-01 96.6% 90.8%
1vrmA01 3.10.520.10 Alpha Beta › Roll › T-fold › ApbE-like domains 0.55 48.0 3.33e-01 100.0% 51.0%
2vf9A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.55 42.0 3.35e-01 86.4% 53.4%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.54 39.0 3.35e-01 76.3% 83.0%
3bzwF00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.54 48.0 3.17e-01 100.0% 59.7%
2y8yA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.54 39.0 3.11e-01 76.3% 41.7%
6zzmA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.54 44.0 3.09e-01 98.3% 75.4%
4rckA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.54 41.0 2.86e-01 84.7% 49.0%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 41.0 3.88e-01 89.8% 95.9%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 43.0 3.64e-01 96.6% 82.7%
3o2iA00 3.30.70.2710 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 36.0 3.16e-01 71.2% 54.8%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 39.0 3.71e-01 83.1% 65.8%
4ntqB00 3.30.2450.20 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.52 42.0 3.39e-01 100.0% 97.2%
2z86D02 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.52 44.0 2.98e-01 100.0% 86.2%
2kfpA00 3.90.1150.30 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.52 40.0 3.15e-01 83.1% 94.4%
6uqjA02 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 45.0 2.78e-01 98.3% 43.8%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.52 40.0 3.43e-01 100.0% 52.6%
2cpiA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 36.0 3.33e-01 76.3% 98.8%
4c89C00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 43.0 2.77e-01 100.0% 25.4%
2xrfC00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.51 36.0 2.32e-01 72.9% 47.2%
3k0yA02 2.60.40.2370 Mainly Beta › Sandwich › Immunoglobulin-like › NigD-like, C-terminal beta sandwich domain 0.51 42.0 3.32e-01 96.6% 66.2%
1kf6B01 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.51 38.0 3.33e-01 88.1% 60.6%
3e0jB00 3.90.1030.20 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 0.51 39.0 2.90e-01 81.4% 69.9%
4d10F01 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.51 41.0 3.11e-01 100.0% 74.3%
2d8iA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.50 38.0 3.38e-01 83.1% 63.6%
2ob0C01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 39.0 2.90e-01 84.7% 64.2%
6jmgB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 39.0 2.83e-01 84.7% 86.1%
1vdxA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.50 43.0 3.11e-01 100.0% 63.6%
3lz8B02 2.60.260.20 Mainly Beta › Sandwich › HSP40/DNAj peptide-binding domain › Urease metallochaperone UreE, N-terminal domain 0.50 37.0 3.43e-01 94.9% 58.4%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3331331 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.94 79.0 6.43e-01 98.3% 52.0%
3335785 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.93 83.0 7.98e-01 98.3% 84.6%
3467141 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.93 81.0 6.36e-01 98.3% 49.1%
3468885 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.93 82.0 7.27e-01 98.3% 68.8%
3831192 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.93 80.0 6.95e-01 98.3% 63.5%
3334492 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.92 71.0 6.32e-01 98.3% 60.0%
3293480 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.91 79.0 7.61e-01 98.3% 83.1%
3380188 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.91 78.0 8.14e-01 98.3% 98.2%
3333577 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.90 84.0 6.95e-01 98.3% 64.2%
3813458 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.90 67.0 7.33e-01 84.7% 92.0%
3299337 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.90 77.0 6.37e-01 98.3% 55.1%
3661849 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.90 76.0 7.46e-01 98.3% 84.1%
3440839 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.90 77.0 6.32e-01 98.3% 54.0%
3429505 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.89 82.0 6.46e-01 98.3% 70.0%
3382011 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.88 81.0 7.20e-01 98.3% 76.2%
3425673 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.88 60.0 6.50e-01 78.0% 84.0%
3370971 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.87 80.0 6.82e-01 98.3% 68.9%
3671921 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.85 72.0 7.45e-01 98.3% 96.4%
3664743 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.85 78.0 6.48e-01 98.3% 61.1%
3446681 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.84 64.0 6.89e-01 93.2% 94.0%
3651077 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.83 67.0 6.33e-01 91.5% 72.9%
3327654 252.2.1.0 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like 0.82 75.0 6.80e-01 98.3% 76.0%
4028791 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.79 57.0 5.87e-01 84.7% 81.8%
3708645 230.4.1.0 ↗ a+b two layers › T-fold › ApbE-like › ApbE-like 0.71 46.0 3.87e-01 71.2% 38.1%
5006770 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.67 35.0 2.49e-01 91.5% 18.8%
3744633 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.65 50.0 4.16e-01 88.1% 47.0%
3168821 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.65 44.0 2.76e-01 71.2% 50.2%
3499134 2485.1.1.1 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.63 49.0 3.85e-01 89.8% 71.4%
5060820 2484.1.1.18 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 0.61 51.0 3.10e-01 100.0% 20.9%
3912785 110.3.1.1 ↗ alpha arrays › DEATH domain › SLED domain › SLED domain › SLED 0.61 45.0 3.74e-01 83.1% 87.8%
3591547 221.3.1.0 ↗ a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains 0.60 44.0 3.68e-01 81.4% 60.9%
3321410 109.4.1.2586 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, Eplus_motif, E_motif 0.59 47.0 2.68e-01 88.1% 19.8%
4928781 2004.1.1.156 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.58 47.0 2.97e-01 94.9% 25.1%
3270701 2498.1.1.39 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › SprT-like 0.58 47.0 3.79e-01 93.2% 86.4%
3838723 821.1.1.0 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.58 47.0 3.52e-01 94.9% 73.3%
3400623 284.1.3.13 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › PF30019 0.58 44.0 4.12e-01 93.2% 68.0%
5073431 1075.1.1.0 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.57 45.0 2.66e-01 88.1% 31.0%
3287378 601.23.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.57 40.0 2.63e-01 74.6% 30.4%
3581101 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.56 44.0 3.39e-01 96.6% 77.1%
4176001 167.1.1.1 ↗ alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 0.56 41.0 3.15e-01 83.1% 79.2%
3995122 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 44.0 3.05e-01 89.8% 32.0%
4932519 167.1.1.1 ↗ alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 0.55 42.0 2.96e-01 84.7% 61.5%
4983643 302.4.1.1 ↗ a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C 0.54 47.0 3.98e-01 100.0% 81.9%
3996281 110.3.1.1 ↗ alpha arrays › DEATH domain › SLED domain › SLED domain › SLED 0.54 45.0 3.76e-01 96.6% 70.0%
3590542 235.1.1.10 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase 0.52 43.0 3.29e-01 98.3% 78.8%
3420078 109.4.1.1267 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.52 43.0 2.44e-01 91.5% 14.6%
3958077 244.1.1.0 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.52 38.0 2.81e-01 78.0% 86.7%
4520768 235.1.1.10 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase 0.52 42.0 3.20e-01 98.3% 74.6%
3066252 4032.1.1.1 ↗ beta complex topology › barrel domains in phase 1 flagellin › barrel domains in phase 1 flagellin › barrel domains in phase 1 flagellin › Flagellin_IN 0.52 41.0 3.56e-01 96.6% 53.9%
3237600 859.1.1.1 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA 0.51 40.0 2.80e-01 86.4% 70.2%
5035011 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.51 45.0 3.02e-01 100.0% 37.0%
3367891 109.4.1.1272 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.51 42.0 2.67e-01 93.2% 19.1%
3482756 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.51 44.0 2.96e-01 100.0% 78.4%
4016567 304.61.1.1 ↗ a+b two layers › Alpha-beta plaits › Aldoxime dehydratase › Aldoxime dehydratase › Dehydratase_hem 0.51 35.0 3.11e-01 74.6% 96.8%
3508049 235.1.1.10 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase 0.51 44.0 3.29e-01 100.0% 74.2%
4171935 167.1.1.1 ↗ alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 0.50 37.0 2.74e-01 79.7% 59.4%
3368548 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.50 34.0 2.34e-01 71.2% 42.4%
4974760 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 40.0 2.78e-01 86.4% 74.9%
3581883 5048.1.1.0 ↗ alpha complex topology › Aquaporin-like › Aquaporin-like › Aquaporin-like 0.50 39.0 2.91e-01 89.8% 97.2%
D2 medium residues 5-95
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01844.30 best HNH 21.8 2.30e-04 54.9% 87.2%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qgpA00 1.10.30.50 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › 0.72 50.0 5.27e-01 81.3% 79.5%
1jllB01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.54 30.0 2.52e-01 80.2% 32.9%
4ijjB00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.51 45.0 3.98e-01 95.6% 68.5%
4bndA02 3.30.1240.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain 0.50 34.0 3.41e-01 70.3% 94.8%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3715952 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.73 47.0 4.75e-01 85.7% 65.6%
185780 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.70 50.0 4.89e-01 81.3% 69.1%
3839706 378.1.1.30 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › PF30178 0.69 43.0 3.94e-01 76.9% 49.6%
3734003 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.67 47.0 4.32e-01 83.5% 56.5%
4313114 378.1.1.30 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › PF30178 0.67 42.0 3.84e-01 76.9% 48.3%
3291398 378.1.1.20 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF1524 0.67 50.0 4.02e-01 79.1% 56.0%
3590055 378.1.1.2 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.66 50.0 4.61e-01 83.5% 63.5%
None — 0.64 49.0 4.22e-01 82.4% 59.3%
3413090 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.58 40.0 4.17e-01 71.4% 81.9%
3199487 377.4.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like 0.56 38.0 4.37e-01 75.8% 98.5%