Back to structures

KJ743987.1__AII27815.1__phiLM21_p064__00063

Bact-Vir

KJ743987.1__AII27815.1__phiLM21_p064__00063

Identity

Accession:
KJ743987 ↗
Kingdom:
phage

Quality

70.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-73
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 61.0 5.02e-01 70.9% 41.9%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 60.0 5.11e-01 70.9% 46.4%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 59.0 4.89e-01 70.9% 43.5%
3lfkD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 59.0 4.57e-01 70.9% 40.9%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 58.0 4.75e-01 70.9% 41.9%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 56.0 4.69e-01 70.9% 44.4%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 57.0 4.75e-01 72.7% 44.4%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 55.0 4.01e-01 70.9% 28.6%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 55.0 4.67e-01 70.9% 44.8%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 54.0 3.94e-01 70.9% 27.1%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 54.0 3.92e-01 70.9% 28.1%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 55.0 4.45e-01 72.7% 44.4%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 53.0 4.32e-01 70.9% 39.6%
2l02A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 52.0 4.46e-01 78.2% 46.3%
5optn00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 57.0 4.82e-01 80.0% 54.8%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 45.0 4.27e-01 85.5% 48.5%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 53.0 4.42e-01 72.7% 43.0%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 51.0 4.42e-01 72.7% 45.2%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 52.0 4.34e-01 74.5% 42.6%
3jamK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 4.57e-01 80.0% 56.2%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 44.0 3.94e-01 90.9% 42.9%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 51.0 4.36e-01 72.7% 47.6%
2jscB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 4.37e-01 74.5% 50.0%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 49.0 4.13e-01 70.9% 43.0%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 48.0 4.09e-01 72.7% 53.3%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 4.66e-01 89.1% 57.8%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 4.11e-01 94.5% 52.0%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 3.70e-01 72.7% 38.5%
3qwuA01 3.10.450.740 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 42.0 4.52e-01 74.5% 80.9%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 40.0 3.48e-01 70.9% 40.4%
2fclA00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.60 49.0 3.65e-01 96.4% 66.7%
2qh5B00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.57 39.0 2.55e-01 70.9% 89.1%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.56 39.0 3.30e-01 76.4% 45.5%
6n6qD00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.54 37.0 2.27e-01 76.4% 77.3%
7q5yB01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.53 43.0 3.49e-01 96.4% 95.8%
7dklA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.16e-01 81.8% 71.1%
4nkwA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.52 38.0 2.32e-01 83.6% 25.0%
2jhjA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.51 34.0 2.76e-01 70.9% 54.2%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 42.0 3.65e-01 98.2% 72.0%
1eupA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.50 36.0 2.20e-01 78.2% 75.9%
ECOD (79)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1109306 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.89 61.0 4.92e-01 70.9% 39.8%
5081465 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.89 61.0 4.85e-01 70.9% 42.0%
4929094 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.89 60.0 5.02e-01 70.9% 44.4%
5079762 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.88 60.0 5.11e-01 70.9% 47.1%
4973555 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.88 60.0 4.12e-01 70.9% 23.5%
4983405 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.88 60.0 4.13e-01 70.9% 24.5%
5037249 101.1.2.128 alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.86 59.0 5.00e-01 70.9% 45.9%
4959343 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.86 59.0 4.89e-01 70.9% 44.4%
5024398 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.86 59.0 4.34e-01 70.9% 32.3%
5069558 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 58.0 6.39e-01 70.9% 86.7%
4995459 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.86 58.0 4.43e-01 70.9% 32.5%
5054757 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 58.0 4.38e-01 70.9% 32.5%
4968601 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 58.0 4.57e-01 70.9% 38.1%
3400082 101.1.2.109 alpha arrays › HTH › HTH › winged helix domain › Rio2_N 0.84 57.0 4.62e-01 70.9% 39.0%
5024966 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.84 58.0 4.22e-01 72.7% 29.4%
4954890 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.84 56.0 4.89e-01 72.7% 47.5%
4941358 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 57.0 4.95e-01 70.9% 50.0%
4942472 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 57.0 4.32e-01 70.9% 32.5%
4955611 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.83 57.0 4.52e-01 70.9% 40.4%
5036041 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 57.0 4.70e-01 72.7% 44.2%
3909408 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.82 51.0 4.53e-01 85.5% 46.7%
4928930 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.82 55.0 4.68e-01 70.9% 43.8%
4968330 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 55.0 4.27e-01 70.9% 34.8%
4980135 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 55.0 4.35e-01 72.7% 36.1%
4971049 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.81 57.0 5.02e-01 78.2% 51.2%
5044182 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 55.0 4.70e-01 70.9% 47.1%
5055105 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 54.0 5.02e-01 70.9% 55.7%
5061230 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 55.0 4.69e-01 72.7% 45.9%
4985657 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 54.0 4.34e-01 70.9% 40.0%
5056233 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 54.0 4.56e-01 70.9% 44.4%
None 0.78 55.0 4.87e-01 96.4% 51.2%
4546696 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 53.0 4.48e-01 70.9% 44.4%
4568448 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.78 53.0 4.56e-01 70.9% 47.1%
4971829 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.78 54.0 4.98e-01 72.7% 57.1%
3281207 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.78 54.0 4.54e-01 72.7% 52.2%
4138939 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 54.0 4.72e-01 72.7% 50.0%
4994983 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 52.0 4.77e-01 70.9% 54.3%
4946906 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 54.0 4.34e-01 74.5% 40.0%
3876302 101.1.2.206 alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH 0.78 48.0 3.87e-01 85.5% 33.3%
4970461 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.77 53.0 4.73e-01 70.9% 53.3%
4339648 101.1.2.852 alpha arrays › HTH › HTH › winged helix domain › PF27213 0.77 53.0 4.41e-01 72.7% 42.1%
4990274 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 53.0 4.26e-01 72.7% 41.0%
5032275 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.76 52.0 4.19e-01 70.9% 40.0%
4498369 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.75 51.0 4.30e-01 70.9% 44.4%
3952617 101.1.2.508 alpha arrays › HTH › HTH › winged helix domain › PF25872 0.75 51.0 4.16e-01 72.7% 39.0%
4937327 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 51.0 5.13e-01 70.9% 78.2%
5039280 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.75 52.0 4.39e-01 72.7% 44.4%
4968035 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 55.0 4.47e-01 78.2% 60.2%
5066579 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.74 51.0 4.29e-01 70.9% 44.4%
3687319 101.1.2.520 alpha arrays › HTH › HTH › winged helix domain › DUF7779 0.74 51.0 4.40e-01 72.7% 47.1%
5041922 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.74 54.0 4.76e-01 78.2% 53.8%
4356453 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.73 49.0 4.13e-01 70.9% 41.1%
5035263 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.73 49.0 3.96e-01 70.9% 40.0%
4977845 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 49.0 4.67e-01 72.7% 58.5%
4985757 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.72 53.0 4.36e-01 78.2% 45.0%
4947228 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 53.0 4.39e-01 78.2% 44.0%
4224164 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.72 50.0 4.42e-01 72.7% 52.5%
5078709 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.72 54.0 4.35e-01 81.8% 41.8%
4941847 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.72 49.0 4.16e-01 72.7% 45.3%
5047029 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.71 52.0 4.20e-01 78.2% 40.4%
5026584 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.71 52.0 4.39e-01 80.0% 46.3%
4943729 101.1.2.878 alpha arrays › HTH › HTH › winged helix domain › CTP-dep_RFKase 0.70 49.0 4.07e-01 72.7% 44.2%
5025624 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.70 51.0 4.51e-01 78.2% 60.0%
3725361 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 48.0 4.10e-01 72.7% 44.4%
5033726 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.69 51.0 4.22e-01 80.0% 45.0%
4939108 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 42.0 4.03e-01 74.5% 52.3%
4937088 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 47.0 4.16e-01 70.9% 51.2%
4533897 101.1.2.508 alpha arrays › HTH › HTH › winged helix domain › PF25872 0.69 51.0 3.69e-01 80.0% 56.0%
4986295 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.69 57.0 4.43e-01 92.7% 65.0%
5067549 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 45.0 4.34e-01 70.9% 64.6%
3700393 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.66 46.0 3.12e-01 96.4% 19.1%
5021801 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 45.0 4.11e-01 72.7% 52.0%
5083603 101.1.2.78 alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.65 42.0 3.14e-01 89.1% 26.4%
5060133 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 46.0 3.91e-01 98.2% 46.7%
3533128 101.1.2.506 alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 0.63 42.0 3.44e-01 72.7% 35.5%
4954114 4203.1.1.0 few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like 0.63 32.0 3.13e-01 72.7% 41.7%
4977549 101.1.2.78 alpha arrays › HTH › HTH › winged helix domain › AlkZ-like 0.62 40.0 3.78e-01 89.1% 52.9%
3289362 101.1.2.610 alpha arrays › HTH › HTH › winged helix domain › WH2_Lhr 0.57 50.0 4.02e-01 96.4% 57.1%
4932485 3261.1.1.0 a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb 0.56 39.0 3.93e-01 76.4% 74.5%