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KJ743987.1__AII27821.1__phiLM21_p070__00069
Bact-VirKJ743987.1__AII27821.1__phiLM21_p070__00069
Identity
- Accession:
- KJ743987 ↗
- Kingdom:
- phage
Quality
77.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-56
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zxiA04 | 1.10.150.570 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › GidA associated domain, C-terminal subdomain | 0.77 | 59.0 | 5.92e-01 | 100.0% | 83.0% |
| 2i1qA01 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.76 | 64.0 | 6.15e-01 | 100.0% | 85.5% |
| 2q0zX02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.75 | 65.0 | 6.34e-01 | 100.0% | 89.7% |
| 2kivA01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.69 | 57.0 | 5.46e-01 | 100.0% | 95.2% |
| 2a19A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.66 | 55.0 | 4.83e-01 | 100.0% | 78.8% |
| 1e9rA02 | 1.10.8.80 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain | 0.63 | 51.0 | 4.17e-01 | 100.0% | 91.2% |
| 7ep1B01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.59 | 44.0 | 2.88e-01 | 82.7% | 21.5% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.58 | 47.0 | 4.28e-01 | 96.2% | 84.0% |
| 3cnhB02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 44.0 | 4.17e-01 | 100.0% | 89.7% |
| 3lkdB01 | 1.20.1260.30 | Mainly Alpha › Up-down Bundle › Ferritin › N6 adenine-specific DNA methyltransferase, N-terminal domain | 0.55 | 42.0 | 3.07e-01 | 94.2% | 34.6% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031699 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.94 | 83.0 | 8.13e-01 | 100.0% | 89.1% |
| 3283661 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.87 | 78.0 | 7.21e-01 | 100.0% | 80.0% |
| 3283042 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.84 | 71.0 | 6.84e-01 | 100.0% | 81.7% |
| 3987397 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.84 | 75.0 | 6.77e-01 | 100.0% | 77.1% |
| 3717161 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.83 | 74.0 | 6.40e-01 | 100.0% | 67.5% |
| 4968089 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.83 | 73.0 | 7.00e-01 | 100.0% | 86.7% |
| 4152195 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.82 | 72.0 | 6.39e-01 | 100.0% | 69.3% |
| 5041504 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.81 | 71.0 | 6.46e-01 | 100.0% | 74.3% |
| 5039718 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.81 | 70.0 | 6.95e-01 | 100.0% | 94.5% |
| 3713961 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.81 | 73.0 | 5.72e-01 | 100.0% | 61.0% |
| 3791428 | 102.1.1.77 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › TNK-like_SAM | 0.80 | 69.0 | 6.45e-01 | 100.0% | 86.2% |
| 4948001 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.80 | 69.0 | 6.45e-01 | 100.0% | 80.0% |
| 4285151 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.80 | 70.0 | 6.55e-01 | 100.0% | 84.6% |
| 3717703 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 72.0 | 6.88e-01 | 100.0% | 90.0% |
| 5060570 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.79 | 69.0 | 5.93e-01 | 100.0% | 61.2% |
| 5076923 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.79 | 68.0 | 6.24e-01 | 100.0% | 74.3% |
| 4255937 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.79 | 68.0 | 5.72e-01 | 100.0% | 56.7% |
| 4981273 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.79 | 68.0 | 6.53e-01 | 98.1% | 86.4% |
| 3410797 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.78 | 67.0 | 6.50e-01 | 100.0% | 91.7% |
| 4024493 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.78 | 66.0 | 6.59e-01 | 100.0% | 92.7% |
| 3251317 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.78 | 68.0 | 5.92e-01 | 100.0% | 81.2% |
| 4559902 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.78 | 68.0 | 6.20e-01 | 100.0% | 78.6% |
| 4943380 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.78 | 66.0 | 6.55e-01 | 98.1% | 92.7% |
| 4497953 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.78 | 69.0 | 5.98e-01 | 100.0% | 70.0% |
| 3554607 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.77 | 66.0 | 5.84e-01 | 100.0% | 68.8% |
| 4977890 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.77 | 65.0 | 6.18e-01 | 100.0% | 80.0% |
| 4340260 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.77 | 66.0 | 6.23e-01 | 100.0% | 81.0% |
| 5034266 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.77 | 66.0 | 6.34e-01 | 100.0% | 88.3% |
| 5035437 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.77 | 66.0 | 6.59e-01 | 100.0% | 92.6% |
| 3446679 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.77 | 65.0 | 6.32e-01 | 100.0% | 90.0% |
| 4946451 | 102.1.1.182 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Rad51 | 0.76 | 65.0 | 5.98e-01 | 100.0% | 85.7% |
| None | — | 0.76 | 65.0 | 6.10e-01 | 100.0% | 78.5% | |
| 3742526 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.76 | 66.0 | 6.39e-01 | 100.0% | 90.0% |
| 4474556 | 102.1.1.9 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › RNA_pol_A_CTD | 0.76 | 65.0 | 6.28e-01 | 100.0% | 85.0% |
| 5061691 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.75 | 64.0 | 6.19e-01 | 100.0% | 86.7% |
| 3551495 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 64.0 | 6.20e-01 | 100.0% | 86.7% |
| 3865559 | 592.1.1.0 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain | 0.75 | 64.0 | 6.19e-01 | 100.0% | 86.7% |
| 4942883 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.75 | 61.0 | 6.05e-01 | 100.0% | 90.9% |
| 4234483 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.74 | 62.0 | 6.00e-01 | 100.0% | 88.3% |
| 4946797 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.74 | 61.0 | 5.83e-01 | 100.0% | 81.5% |
| 3570848 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.73 | 62.0 | 5.60e-01 | 100.0% | 72.0% |
| 3532794 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.73 | 61.0 | 5.67e-01 | 100.0% | 82.9% |
| 4945133 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.73 | 61.0 | 5.83e-01 | 100.0% | 84.1% |
| 5052765 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.73 | 61.0 | 5.64e-01 | 100.0% | 75.7% |
| 4975251 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.73 | 60.0 | 5.83e-01 | 100.0% | 88.3% |
| 3290867 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.73 | 61.0 | 5.94e-01 | 100.0% | 90.0% |
| 4147532 | 102.1.1.100 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF29713 | 0.72 | 59.0 | 5.66e-01 | 100.0% | 86.2% |
| 4041283 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.72 | 59.0 | 5.78e-01 | 100.0% | 88.3% |
| 3617542 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.72 | 60.0 | 5.86e-01 | 100.0% | 86.7% |
| 3973085 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.72 | 60.0 | 5.82e-01 | 100.0% | 88.3% |
| 3608219 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.71 | 59.0 | 5.88e-01 | 100.0% | 94.5% |
| 4015442 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.71 | 59.0 | 5.34e-01 | 100.0% | 80.0% |
| 4113412 | 102.1.1.100 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF29713 | 0.69 | 57.0 | 5.47e-01 | 100.0% | 92.1% |
| 3174667 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.69 | 59.0 | 5.71e-01 | 100.0% | 98.3% |
| 3184108 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.69 | 58.0 | 5.61e-01 | 100.0% | 88.3% |
| 3688549 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.69 | 58.0 | 5.59e-01 | 100.0% | 88.3% |
| 5040400 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.67 | 55.0 | 5.35e-01 | 100.0% | 86.7% |
| 3218213 | 101.26.1.1 ↗ | alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N | 0.59 | 49.0 | 4.74e-01 | 100.0% | 95.0% |