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KJ746502.1__AID18342.1__PPF1_29__00029
Bact-VirKJ746502.1__AID18342.1__PPF1_29__00029
Identity
- Accession:
- KJ746502 ↗
- Kingdom:
- phage
Quality
69.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-84
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f4mA02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.64 | 40.0 | 4.34e-01 | 78.3% | 78.0% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.61 | 38.0 | 4.31e-01 | 85.0% | 100.0% |
| 1hczA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.61 | 36.0 | 3.69e-01 | 81.7% | 59.3% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.61 | 32.0 | 3.30e-01 | 76.7% | 49.1% |
| 2ky6A00 | 2.40.290.30 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › Mediator complex subunit 25, ACID domain | 0.60 | 43.0 | 3.14e-01 | 88.3% | 27.7% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.58 | 36.0 | 2.95e-01 | 81.7% | 33.6% |
| 3dcxA00 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.57 | 35.0 | 2.91e-01 | 81.7% | 30.8% |
| 1sxjH01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.57 | 41.0 | 3.33e-01 | 78.3% | 84.7% |
| 1bprA00 | 2.60.34.10 | Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 | 0.55 | 42.0 | 3.10e-01 | 85.0% | 46.8% |
| 2cnqA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.54 | 43.0 | 3.41e-01 | 93.3% | 91.6% |
| 7arcC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.54 | 36.0 | 2.84e-01 | 86.7% | 31.1% |
| 3zqsA02 | 3.10.110.20 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › RWD domain-like | 0.54 | 34.0 | 3.02e-01 | 95.0% | 39.8% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 39.0 | 3.65e-01 | 85.0% | 61.3% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.53 | 36.0 | 3.82e-01 | 88.3% | 84.3% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.53 | 42.0 | 2.63e-01 | 86.7% | 79.0% |
| 3s95A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 35.0 | 3.17e-01 | 91.7% | 46.6% |
| 2k5dA01 | 2.40.50.390 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Conjugative transposon protein, DUF961 | 0.53 | 39.0 | 3.20e-01 | 81.7% | 43.1% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 36.0 | 3.14e-01 | 71.7% | 70.5% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.53 | 36.0 | 2.89e-01 | 98.3% | 33.6% |
| 2l97A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.53 | 39.0 | 3.34e-01 | 80.0% | 56.6% |
| 3a32A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.53 | 42.0 | 3.21e-01 | 88.3% | 73.8% |
| 3h6qA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 40.0 | 2.99e-01 | 85.0% | 42.3% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.52 | 33.0 | 3.41e-01 | 80.0% | 67.9% |
| 1nnwB00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 41.0 | 2.82e-01 | 91.7% | 97.6% |
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.52 | 30.0 | 2.85e-01 | 90.0% | 39.7% |
| 5r0dB01 | 2.60.34.20 | Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › | 0.52 | 39.0 | 3.03e-01 | 83.3% | 55.9% |
| 7jl1B01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.51 | 39.0 | 2.96e-01 | 85.0% | 53.6% |
| 6fgcA01 | 3.40.980.10 | Alpha Beta › 3-Layer(aba) Sandwich › Molybdenum Cofactor Biosythetic Enzyme; Chain A › MoaB/Mog-like domain | 0.50 | 38.0 | 2.75e-01 | 81.7% | 85.1% |
| 3ulbA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 35.0 | 3.18e-01 | 73.3% | 54.2% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3699520 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.72 | 47.0 | 5.10e-01 | 71.7% | 82.0% |
| 3708517 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 50.0 | 3.80e-01 | 78.3% | 33.3% |
| 3942485 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.65 | 39.0 | 3.13e-01 | 88.3% | 29.2% |
| 5065528 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.64 | 36.0 | 3.45e-01 | 81.7% | 45.7% |
| 3803135 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.64 | 43.0 | 4.83e-01 | 71.7% | 95.6% |
| 5044393 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 36.0 | 3.67e-01 | 80.0% | 55.0% |
| 3971672 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.63 | 47.0 | 3.77e-01 | 80.0% | 55.9% |
| 5072662 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.59 | 46.0 | 3.63e-01 | 88.3% | 68.9% |
| 3317848 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.59 | 38.0 | 2.39e-01 | 85.0% | 11.3% |
| 3239830 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.57 | 34.0 | 2.29e-01 | 86.7% | 13.5% |
| 3922916 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.56 | 42.0 | 3.30e-01 | 86.7% | 54.7% |
| 4032833 | 221.1.3.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain | 0.55 | 42.0 | 3.61e-01 | 88.3% | 70.9% |
| 3608772 | 2004.1.1.427 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RHSP, RHS_N | 0.55 | 43.0 | 2.65e-01 | 90.0% | 78.4% |
| 4411074 | 3124.1.1.1 ↗ | beta sandwiches › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › Nascent polypeptide-associated complex (NAC) dimerization domain › NAC | 0.55 | 40.0 | 4.24e-01 | 86.7% | 94.0% |
| 4372908 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.54 | 41.0 | 3.28e-01 | 83.3% | 79.2% |
| 3939755 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.54 | 41.0 | 3.18e-01 | 86.7% | 79.1% |
| 3518811 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.54 | 37.0 | 3.12e-01 | 76.7% | 40.9% |
| 162079 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.53 | 42.0 | 2.87e-01 | 91.7% | 97.6% |
| 3817655 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.53 | 41.0 | 3.39e-01 | 90.0% | 52.0% |
| 4944397 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 28.0 | 3.01e-01 | 78.3% | 54.0% |
| 5037345 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.53 | 40.0 | 3.19e-01 | 83.3% | 83.5% |
| 3256584 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 39.0 | 3.52e-01 | 85.0% | 58.7% |
| 2834342 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.52 | 33.0 | 3.23e-01 | 85.0% | 55.9% |
| 4232371 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.52 | 39.0 | 3.23e-01 | 85.0% | 88.3% |
| 3215762 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.52 | 39.0 | 3.15e-01 | 86.7% | 56.3% |
| 3580328 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.51 | 37.0 | 2.60e-01 | 76.7% | 26.8% |
| 3511017 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.51 | 36.0 | 2.98e-01 | 76.7% | 39.1% |
| 3595446 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 38.0 | 3.18e-01 | 80.0% | 62.9% |
| 3499622 | 63.1.1.3 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH | 0.51 | 40.0 | 3.17e-01 | 93.3% | 64.8% |
| 4943931 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 39.0 | 3.32e-01 | 83.3% | 74.0% |