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KJ746502.1__AID18382.1__PPF1_69__00069
Bact-VirKJ746502.1__AID18382.1__PPF1_69__00069
Identity
- Accession:
- KJ746502 ↗
- Kingdom:
- phage
Quality
82.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 41-112
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7zdtD01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.79 | 54.0 | 3.42e-01 | 70.8% | 16.3% |
| 4ehsA00 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.75 | 63.0 | 5.27e-01 | 93.1% | 91.9% |
| 3m3mA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.74 | 49.0 | 4.09e-01 | 81.9% | 41.4% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.71 | 49.0 | 4.53e-01 | 70.8% | 68.9% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.71 | 48.0 | 4.90e-01 | 70.8% | 73.2% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.70 | 48.0 | 4.93e-01 | 70.8% | 83.6% |
| 2x0cA01 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.68 | 49.0 | 3.68e-01 | 76.4% | 42.1% |
| 4iluA02 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.67 | 44.0 | 3.79e-01 | 86.1% | 43.2% |
| 1vs5O00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.67 | 58.0 | 5.39e-01 | 100.0% | 76.1% |
| 1dowA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.66 | 53.0 | 3.91e-01 | 90.3% | 57.1% |
| 2pmsC00 | 6.10.140.920 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 46.0 | 4.10e-01 | 83.3% | 49.5% |
| 5b1aC01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 44.0 | 4.59e-01 | 72.2% | 75.0% |
| 8e9gK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 48.0 | 4.51e-01 | 95.8% | 69.2% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.61 | 51.0 | 4.16e-01 | 88.9% | 57.6% |
| 1n1cA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.61 | 42.0 | 4.03e-01 | 70.8% | 64.6% |
| 3bh1A02 | 1.20.1570.10 | Mainly Alpha › Up-down Bundle › dip2346 fold › dip2346 domain like | 0.60 | 42.0 | 3.76e-01 | 73.6% | 51.5% |
| 2gd5A00 | 6.10.140.1230 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 49.0 | 4.05e-01 | 97.2% | 71.8% |
| 3k3uA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 51.0 | 4.20e-01 | 100.0% | 82.5% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.58 | 49.0 | 3.63e-01 | 100.0% | 68.7% |
| 2wb7A03 | 1.20.120.870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain | 0.57 | 48.0 | 4.03e-01 | 98.6% | 74.3% |
| 4p9tA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 47.0 | 4.02e-01 | 97.2% | 60.0% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.55 | 44.0 | 4.43e-01 | 88.9% | 91.9% |
| 3qqaA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 45.0 | 3.71e-01 | 100.0% | 86.5% |
| 1k04A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.53 | 45.0 | 4.02e-01 | 95.8% | 73.1% |
| 4al0A00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.52 | 44.0 | 3.62e-01 | 100.0% | 69.9% |
| 2mmbA00 | 4.10.640.20 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S18 › | 0.51 | 45.0 | 3.98e-01 | 100.0% | 85.0% |
| 3n1bA02 | 1.20.1280.130 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.51 | 39.0 | 3.58e-01 | 81.9% | 88.4% |
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 45.0 | 3.47e-01 | 100.0% | 52.2% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3235297 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.78 | 53.0 | 3.86e-01 | 70.8% | 29.7% |
| 3299419 | 5086.1.1.126 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PPI_helical | 0.77 | 53.0 | 3.91e-01 | 72.2% | 39.4% |
| 3613932 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.74 | 51.0 | 4.32e-01 | 70.8% | 90.4% |
| 3559003 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.74 | 50.0 | 4.50e-01 | 70.8% | 76.0% |
| 4485364 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.73 | 51.0 | 3.62e-01 | 72.2% | 83.0% |
| 3653618 | 5069.1.3.69 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › ETR1_N | 0.72 | 65.0 | 5.92e-01 | 100.0% | 80.0% |
| 4959934 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.71 | 55.0 | 5.48e-01 | 100.0% | 81.3% |
| 4566325 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.70 | 49.0 | 3.12e-01 | 72.2% | 16.1% |
| 3839095 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.70 | 62.0 | 4.71e-01 | 100.0% | 82.9% |
| 3490752 | 5054.1.1.17 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TRAM_LAG1_CLN8 | 0.68 | 60.0 | 4.07e-01 | 94.4% | 52.5% |
| 4090640 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.68 | 46.0 | 4.23e-01 | 70.8% | 53.7% |
| 4021859 | 3924.1.1.0 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 | 0.67 | 52.0 | 3.44e-01 | 83.3% | 41.4% |
| 4953697 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.67 | 56.0 | 5.52e-01 | 100.0% | 88.0% |
| 4683274 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.65 | 54.0 | 5.29e-01 | 100.0% | 83.7% |
| 5016128 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.63 | 52.0 | 5.21e-01 | 100.0% | 89.3% |
| 4930533 | 3843.1.1.6 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › MrpF_PhaF | 0.63 | 53.0 | 5.13e-01 | 100.0% | 83.7% |
| 3603229 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.63 | 53.0 | 5.02e-01 | 100.0% | 78.8% |
| 3228000 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.63 | 50.0 | 5.00e-01 | 95.8% | 88.0% |
| 3280988 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.62 | 51.0 | 4.96e-01 | 98.6% | 82.5% |
| 3231922 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 47.0 | 3.22e-01 | 84.7% | 37.1% |
| 3672309 | 601.19.1.29 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › CA109-like | 0.61 | 52.0 | 4.03e-01 | 100.0% | 56.9% |
| 4054463 | 5069.1.3.53 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › CASP_dom | 0.59 | 50.0 | 4.58e-01 | 100.0% | 75.0% |
| 3746892 | 601.1.2.1 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Vinculin | 0.57 | 49.0 | 4.02e-01 | 97.2% | 53.3% |
| 3329822 | 1134.1.2.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Archaeal C-Ala helical domain | 0.57 | 47.0 | 4.34e-01 | 93.1% | 85.3% |
| 3471803 | 5038.2.1.1 ↗ | alpha superhelices › Cytochrome c oxidase subunit I-like › MAPEG domain-like › MAPEG domain-like › MAPEG | 0.56 | 48.0 | 4.06e-01 | 98.6% | 77.6% |
| 3715686 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.55 | 48.0 | 3.38e-01 | 100.0% | 73.5% |
| 4014082 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.54 | 46.0 | 4.06e-01 | 98.6% | 88.2% |
| 3691994 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.53 | 45.0 | 2.97e-01 | 95.8% | 26.3% |
| 3832084 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.53 | 45.0 | 4.50e-01 | 100.0% | 93.3% |
| 3951295 | 5073.1.1.11 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_C | 0.52 | 44.0 | 2.66e-01 | 100.0% | 32.0% |