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KJ944830.1__AII27471.1__B8b_020__00020
Bact-VirKJ944830.1__AII27471.1__B8b_020__00020
Identity
- Accession:
- KJ944830 ↗
- Kingdom:
- phage
Quality
72.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-59
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.70 | 59.0 | 5.31e-01 | 100.0% | 69.0% |
| 5ysnB02 | 3.40.50.11240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Ethanolamine ammonia-lyase light chain (EutC) | 0.66 | 56.0 | 3.90e-01 | 100.0% | 35.1% |
| 2ltrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.66 | 48.0 | 3.90e-01 | 100.0% | 39.0% |
| 1h8mA00 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.65 | 50.0 | 3.75e-01 | 100.0% | 32.1% |
| 3a21A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.65 | 45.0 | 3.73e-01 | 74.5% | 82.4% |
| 2wngA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 54.0 | 4.60e-01 | 100.0% | 89.7% |
| 4khbC00 | 2.30.29.210 | Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p | 0.61 | 46.0 | 3.69e-01 | 84.3% | 50.9% |
| 4jgwA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.60 | 41.0 | 2.95e-01 | 72.5% | 25.6% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 46.0 | 3.62e-01 | 84.3% | 43.1% |
| 1g8jB00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.59 | 49.0 | 3.74e-01 | 96.1% | 54.7% |
| 2cy5A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 44.0 | 3.37e-01 | 84.3% | 37.2% |
| 4g65A04 | 3.30.70.1450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Regulator of K+ conductance, C-terminal domain | 0.59 | 51.0 | 4.24e-01 | 100.0% | 94.5% |
| 1vp4B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 44.0 | 3.12e-01 | 86.3% | 70.6% |
| 1o4sA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 44.0 | 3.24e-01 | 86.3% | 74.8% |
| 3zo9B03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 46.0 | 3.76e-01 | 88.2% | 91.6% |
| 1vwxr00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.57 | 45.0 | 3.51e-01 | 92.2% | 44.8% |
| 6klsA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.56 | 46.0 | 3.83e-01 | 94.1% | 67.0% |
| 2d9wA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 42.0 | 3.44e-01 | 100.0% | 40.9% |
| 3btxA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.56 | 39.0 | 2.64e-01 | 74.5% | 85.3% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.55 | 43.0 | 3.53e-01 | 100.0% | 72.4% |
| 5z3gZ01 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.55 | 44.0 | 3.44e-01 | 100.0% | 38.7% |
| 1z24A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 37.0 | 2.58e-01 | 74.5% | 19.0% |
| 3a7rA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.54 | 44.0 | 3.83e-01 | 98.0% | 58.4% |
| 6m9yA00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.53 | 37.0 | 3.62e-01 | 74.5% | 66.7% |
| 2epbA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 41.0 | 3.81e-01 | 98.0% | 67.6% |
| 3njcA00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.51 | 35.0 | 2.62e-01 | 74.5% | 47.1% |
| 4qiwB04 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.51 | 43.0 | 3.11e-01 | 100.0% | 80.4% |
| 3eleC01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 40.0 | 2.96e-01 | 94.1% | 88.4% |
| 1i3pA00 | 2.60.250.10 | Mainly Beta › Sandwich › Baculovirus p35 › Baculovirus p35 | 0.50 | 39.0 | 2.55e-01 | 92.2% | 59.5% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.50 | 38.0 | 2.54e-01 | 84.3% | 54.3% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3587376 | 386.1.1.344 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Arm-DNA-bind_4 | 0.74 | 66.0 | 6.50e-01 | 100.0% | 92.7% |
| 4151202 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.71 | 58.0 | 3.87e-01 | 94.1% | 38.6% |
| 119245 | 252.3.1.1 ↗ | a+b two layers › DNA-binding domain › Uncharacterized protein yaiA › Uncharacterized protein yaiA › YaiA | 0.70 | 59.0 | 5.31e-01 | 100.0% | 69.0% |
| 3739949 | 306.6.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like | 0.67 | 56.0 | 4.82e-01 | 98.0% | 92.9% |
| 4974435 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.66 | 49.0 | 3.99e-01 | 80.4% | 46.3% |
| 4008870 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.65 | 56.0 | 3.34e-01 | 100.0% | 23.1% |
| 2770657 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.65 | 41.0 | 4.49e-01 | 72.5% | 82.5% |
| 5049605 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.64 | 53.0 | 5.24e-01 | 100.0% | 92.7% |
| 3959682 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 44.0 | 3.91e-01 | 74.5% | 80.0% |
| 3454135 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.63 | 43.0 | 3.54e-01 | 72.5% | 44.7% |
| 3408007 | 2485.1.1.35 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › MRP_L53 | 0.63 | 51.0 | 4.17e-01 | 100.0% | 85.5% |
| 3713549 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.63 | 50.0 | 4.08e-01 | 100.0% | 44.5% |
| 3929989 | 330.16.1.2 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain › KAP | 0.62 | 48.0 | 4.09e-01 | 86.3% | 72.9% |
| 3231961 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 49.0 | 4.06e-01 | 90.2% | 58.9% |
| 3906073 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 47.0 | 3.75e-01 | 84.3% | 41.9% |
| 3717185 | 330.1.1.22 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF26536 | 0.61 | 47.0 | 3.46e-01 | 100.0% | 29.4% |
| 3577497 | 389.1.1.17 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › FXa_inhibition | 0.60 | 46.0 | 3.44e-01 | 88.2% | 45.7% |
| 1346676 | 3347.1.1.1 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › DUF3836 | 0.59 | 46.0 | 3.62e-01 | 84.3% | 43.1% |
| 3546143 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 47.0 | 2.80e-01 | 98.0% | 11.2% |
| 3957335 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.59 | 40.0 | 3.13e-01 | 72.5% | 32.2% |
| 3372798 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.58 | 47.0 | 4.17e-01 | 100.0% | 92.9% |
| 3416141 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.58 | 39.0 | 3.98e-01 | 74.5% | 74.0% |
| 3272188 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.57 | 46.0 | 2.89e-01 | 100.0% | 65.8% |
| 3810543 | 220.1.1.20 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH | 0.57 | 44.0 | 3.47e-01 | 100.0% | 40.0% |
| 3606204 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 46.0 | 3.42e-01 | 92.2% | 38.5% |
| 3166714 | 220.1.1.26 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II | 0.56 | 42.0 | 3.11e-01 | 84.3% | 39.3% |
| 3462522 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 46.0 | 3.64e-01 | 100.0% | 70.4% |
| 4954554 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.56 | 41.0 | 3.32e-01 | 80.4% | 59.0% |
| 4666687 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.56 | 39.0 | 2.64e-01 | 74.5% | 52.9% |
| 5074714 | 213.1.1.27 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 | 0.55 | 48.0 | 3.87e-01 | 100.0% | 55.2% |
| 3982540 | 2484.1.1.18 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1 | 0.55 | 45.0 | 3.01e-01 | 98.0% | 24.7% |
| 3635930 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.54 | 37.0 | 2.66e-01 | 72.5% | 23.9% |
| 3703145 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 46.0 | 3.86e-01 | 100.0% | 83.2% |
| 3273294 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 40.0 | 2.56e-01 | 90.2% | 24.6% |
| 3314483 | 304.8.1.57 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 | 0.54 | 46.0 | 3.63e-01 | 100.0% | 77.4% |
| 4978815 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 44.0 | 3.06e-01 | 98.0% | 75.3% |
| 3733523 | 4.8.1.8 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › GEN1_C | 0.51 | 40.0 | 3.78e-01 | 92.2% | 78.5% |
| 4947761 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.51 | 43.0 | 2.94e-01 | 100.0% | 25.4% |
| 5081762 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.50 | 40.0 | 2.39e-01 | 94.1% | 25.5% |
| 4928453 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.50 | 40.0 | 2.56e-01 | 100.0% | 16.4% |