←Back to structures
KM058087.1__AIK67505.1__SS1_01__00001
Bact-VirKM058087.1__AIK67505.1__SS1_01__00001
Identity
- Accession:
- KM058087 ↗
- Kingdom:
- phage
Quality
82.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-58
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d5lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 52.0 | 5.69e-01 | 78.6% | 95.6% |
| 3d5lA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 52.0 | 5.37e-01 | 78.6% | 92.3% |
| 4a18Q01 | 1.10.10.1760 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L36 | 0.69 | 49.0 | 4.64e-01 | 76.8% | 68.1% |
| 6t0bf00 | 1.25.40.40 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI | 0.68 | 57.0 | 4.83e-01 | 100.0% | 57.8% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.67 | 56.0 | 4.68e-01 | 96.4% | 58.4% |
| 6fbtA01 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.67 | 56.0 | 5.10e-01 | 96.4% | 84.2% |
| 7y4rB01 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.64 | 54.0 | 4.51e-01 | 100.0% | 72.6% |
| 1vdyA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.64 | 52.0 | 4.06e-01 | 98.2% | 52.9% |
| 3eslA02 | 1.25.40.930 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 54.0 | 4.33e-01 | 100.0% | 88.2% |
| 1s7zA01 | 1.20.120.780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DNA mimic ocr | 0.63 | 44.0 | 3.74e-01 | 76.8% | 88.1% |
| 2yvyA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.62 | 51.0 | 4.10e-01 | 98.2% | 47.2% |
| 4v19W00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.61 | 47.0 | 3.41e-01 | 85.7% | 30.7% |
| 1bo9A00 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.61 | 49.0 | 4.65e-01 | 96.4% | 93.2% |
| 4nrhB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 47.0 | 3.44e-01 | 89.3% | 32.4% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 42.0 | 4.04e-01 | 76.8% | 68.2% |
| 2wviA00 | 1.25.40.430 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 48.0 | 3.59e-01 | 96.4% | 35.0% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.59 | 42.0 | 3.57e-01 | 78.6% | 77.5% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 41.0 | 3.16e-01 | 75.0% | 88.4% |
| 6xssA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.59 | 48.0 | 4.53e-01 | 96.4% | 76.8% |
| 3hqiA02 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.58 | 45.0 | 3.56e-01 | 100.0% | 37.1% |
| 1fbwA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.58 | 46.0 | 2.82e-01 | 94.6% | 26.4% |
| 2xgsB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 45.0 | 4.23e-01 | 96.4% | 71.2% |
| 3dwlG00 | 1.25.40.190 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Actin-related protein 2/3 complex subunit 5 | 0.57 | 45.0 | 3.78e-01 | 96.4% | 56.1% |
| 4nnzA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.56 | 42.0 | 2.91e-01 | 80.4% | 71.2% |
| 4gtnA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.56 | 44.0 | 4.18e-01 | 96.4% | 83.8% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 44.0 | 3.36e-01 | 91.1% | 89.9% |
| 2v7kA02 | 1.20.58.480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 44.0 | 3.15e-01 | 96.4% | 84.1% |
| 4i17A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 42.0 | 2.99e-01 | 92.9% | 25.9% |
| 1hxiA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 43.0 | 3.66e-01 | 96.4% | 78.6% |
| 4ui9Y03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 43.0 | 3.98e-01 | 94.6% | 70.0% |
| 4ga6A02 | 1.20.970.50 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › | 0.54 | 42.0 | 3.33e-01 | 98.2% | 63.2% |
| 1vquA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.54 | 43.0 | 4.20e-01 | 100.0% | 91.0% |
| 2elcA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.52 | 40.0 | 3.91e-01 | 96.4% | 85.1% |
| 4o6mA02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.52 | 42.0 | 3.03e-01 | 98.2% | 71.8% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4014080 | 109.21.1.9 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nup84_Nup100 | 0.72 | 62.0 | 3.57e-01 | 100.0% | 10.2% |
| 3681049 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.72 | 61.0 | 3.93e-01 | 96.4% | 22.3% |
| 3426286 | 109.4.1.621 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3 | 0.70 | 59.0 | 4.09e-01 | 100.0% | 53.7% |
| 3303906 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.69 | 57.0 | 4.38e-01 | 96.4% | 44.4% |
| 3229584 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.68 | 46.0 | 3.42e-01 | 80.4% | 25.6% |
| 5003813 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.67 | 57.0 | 5.19e-01 | 96.4% | 80.0% |
| 5019559 | 608.1.1.0 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like | 0.67 | 56.0 | 4.69e-01 | 96.4% | 60.0% |
| 3366323 | 101.1.10.21 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N,Cyclin_C | 0.67 | 52.0 | 3.50e-01 | 89.3% | 36.2% |
| 3783077 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 53.0 | 3.74e-01 | 96.4% | 32.9% |
| 3247736 | 109.4.1.110 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mad3_BUB1_I | 0.65 | 53.0 | 3.67e-01 | 92.9% | 30.0% |
| 3665357 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.65 | 53.0 | 3.55e-01 | 96.4% | 25.7% |
| 3934037 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 52.0 | 3.38e-01 | 94.6% | 22.5% |
| 4524098 | 131.2.1.3 ↗ | alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › PolyA_pol_RNAbd | 0.63 | 52.0 | 3.35e-01 | 92.9% | 35.9% |
| 3705081 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 49.0 | 3.19e-01 | 96.4% | 22.9% |
| 3906012 | 109.4.1.110 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mad3_BUB1_I | 0.61 | 51.0 | 3.46e-01 | 96.4% | 24.8% |
| 3609280 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.61 | 48.0 | 3.89e-01 | 98.2% | 42.5% |
| 3789554 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.61 | 47.0 | 4.03e-01 | 83.9% | 62.2% |
| 3238365 | 109.4.1.32 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MIF4G | 0.59 | 47.0 | 2.76e-01 | 96.4% | 14.1% |
| 3307653 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 46.0 | 3.84e-01 | 96.4% | 48.2% |
| 3390887 | 109.4.1.1347 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16, TPR_19 | 0.57 | 45.0 | 3.31e-01 | 94.6% | 51.7% |
| 3591498 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.57 | 44.0 | 3.01e-01 | 96.4% | 40.0% |
| 3998538 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.57 | 45.0 | 4.30e-01 | 96.4% | 94.3% |
| 3819533 | 109.27.1.4 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BTB | 0.56 | 45.0 | 3.24e-01 | 100.0% | 31.0% |
| 3370565 | 109.4.1.1353 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_11, TPR_16 | 0.55 | 47.0 | 3.39e-01 | 96.4% | 33.9% |
| 2429103 | 109.4.1.109 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 | 0.54 | 42.0 | 2.78e-01 | 94.6% | 28.9% |
| 3898526 | 109.4.1.202 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 | 0.54 | 45.0 | 3.81e-01 | 96.4% | 59.6% |
| 3457502 | 109.4.1.1734 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_11 | 0.53 | 42.0 | 3.49e-01 | 96.4% | 53.0% |
D2
high
residues 160-206
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3anwA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 54.0 | 4.07e-01 | 78.7% | 56.6% |
| 2r4gA02 | 1.10.10.1970 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › TERT catalytic subunit-like | 0.72 | 58.0 | 5.41e-01 | 100.0% | 79.7% |
| 5b1aC01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 48.0 | 4.26e-01 | 72.3% | 60.3% |
| 3vhlA02 | 1.20.58.740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C | 0.69 | 56.0 | 4.37e-01 | 100.0% | 70.8% |
| 4gtnA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.69 | 60.0 | 5.22e-01 | 100.0% | 67.6% |
| 3h5qA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.67 | 57.0 | 5.11e-01 | 100.0% | 71.4% |
| 1uouA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.67 | 57.0 | 5.12e-01 | 97.9% | 72.1% |
| 4ga4A01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.67 | 57.0 | 5.10e-01 | 97.9% | 73.1% |
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.66 | 53.0 | 3.56e-01 | 97.9% | 25.7% |
| 1vquA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.66 | 56.0 | 5.05e-01 | 100.0% | 73.1% |
| 1n00A01 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.64 | 53.0 | 4.56e-01 | 100.0% | 69.0% |
| 1m9iA01 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.64 | 52.0 | 4.56e-01 | 100.0% | 72.5% |
| 2af7D00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.63 | 51.0 | 3.89e-01 | 95.7% | 50.4% |
| 4tq1A03 | 1.10.246.190 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Autophagy protein Apg5, helix rich domain | 0.62 | 38.0 | 3.60e-01 | 78.7% | 50.0% |
| 3qwlA01 | 1.10.10.750 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ypt/Rab-GAP domain of gyp1p, domain 1 | 0.60 | 47.0 | 4.52e-01 | 100.0% | 76.3% |
| 7ob9B01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.60 | 50.0 | 3.37e-01 | 97.9% | 42.7% |
| 1sy7A02 | 1.20.1370.20 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Catalase, four-helical domain | 0.58 | 44.0 | 4.14e-01 | 91.5% | 65.6% |
| 2hlyA00 | 3.10.550.10 | Alpha Beta › Roll › Atu2299-like › Hypothetical protein Atu2299 | 0.57 | 42.0 | 2.78e-01 | 80.9% | 60.5% |
| 3e3vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 44.0 | 4.33e-01 | 89.4% | 92.5% |
| 4h0pA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 45.0 | 3.06e-01 | 95.7% | 68.1% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.55 | 43.0 | 3.49e-01 | 97.9% | 82.0% |
| 6n2nA01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.55 | 43.0 | 2.99e-01 | 89.4% | 27.5% |
| 2rreA00 | 1.10.10.2010 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 39.0 | 3.46e-01 | 83.0% | 74.3% |
| 4yzwA01 | 1.20.1370.10 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Hemocyanin, N-terminal domain | 0.52 | 41.0 | 3.08e-01 | 100.0% | 47.0% |
| 2ixnA02 | 1.20.120.1150 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphotyrosyl phosphate activator, C-terminal lid domain | 0.51 | 39.0 | 3.29e-01 | 100.0% | 69.2% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4013992 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.76 | 64.0 | 4.50e-01 | 100.0% | 47.5% |
| 3909974 | 109.4.1.601 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PLU-1 | 0.72 | 59.0 | 3.78e-01 | 100.0% | 18.4% |
| 4133095 | 601.2.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes › 7tm_1 | 0.71 | 48.0 | 3.56e-01 | 70.2% | 30.4% |
| 5073131 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.69 | 57.0 | 4.37e-01 | 100.0% | 66.7% |
| 3487207 | 176.1.1.0 ↗ | alpha arrays › Annexin › Annexin › Annexin | 0.66 | 54.0 | 4.91e-01 | 100.0% | 81.4% |
| 3364567 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.66 | 53.0 | 3.93e-01 | 100.0% | 33.8% |
| 4418429 | 176.1.1.1 ↗ | alpha arrays › Annexin › Annexin › Annexin › Annexin | 0.65 | 52.0 | 4.59e-01 | 100.0% | 73.8% |
| 4218480 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.65 | 43.0 | 3.23e-01 | 70.2% | 29.6% |
| 3194589 | 176.1.1.1 ↗ | alpha arrays › Annexin › Annexin › Annexin › Annexin | 0.63 | 49.0 | 4.32e-01 | 100.0% | 69.4% |
| 4135733 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.59 | 44.0 | 3.18e-01 | 80.9% | 98.6% |
| 3413676 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 45.0 | 3.01e-01 | 93.6% | 20.9% |
| 3261482 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.56 | 46.0 | 3.96e-01 | 91.5% | 58.7% |
| 4665470 | 4030.1.1.2 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › F-actin_cap_A | 0.56 | 46.0 | 4.37e-01 | 91.5% | 81.8% |
| 3733705 | 4048.1.1.1 ↗ | alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel | 0.56 | 43.0 | 3.63e-01 | 93.6% | 57.9% |
| 4976943 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 46.0 | 2.70e-01 | 95.7% | 11.4% |
| 3673509 | 4048.1.1.1 ↗ | alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel | 0.54 | 45.0 | 4.14e-01 | 100.0% | 93.8% |
| 3236431 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 44.0 | 3.89e-01 | 97.9% | 65.7% |
| 3297949 | 592.7.1.2 ↗ | alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › PWI | 0.50 | 41.0 | 3.80e-01 | 100.0% | 81.5% |
D3
medium
residues 64-135
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lsgA00 | 1.20.58.1280 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DNA repair protein Rev1, C-terminal domain | 0.64 | 50.0 | 4.59e-01 | 87.5% | 72.2% |
| 3ec7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 52.0 | 3.75e-01 | 100.0% | 95.3% |
| 4g1tA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 50.0 | 4.26e-01 | 98.6% | 69.9% |
| 3i4uA01 | 1.20.120.1080 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 41.0 | 3.75e-01 | 73.6% | 59.8% |
| 2fupA00 | 1.20.58.300 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like | 0.57 | 40.0 | 3.43e-01 | 76.4% | 89.8% |
| 2ff4A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 41.0 | 3.81e-01 | 80.6% | 68.7% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 38.0 | 2.96e-01 | 75.0% | 56.6% |
| 5ffdA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.54 | 40.0 | 3.25e-01 | 77.8% | 90.5% |
| 2rgnB01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.54 | 42.0 | 3.19e-01 | 91.7% | 81.4% |
| 4l9aA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 40.0 | 2.84e-01 | 93.1% | 72.5% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3672276 | 5051.1.1.0 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like | 0.72 | 51.0 | 3.01e-01 | 73.6% | 44.0% |
| 5080068 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.65 | 54.0 | 4.87e-01 | 91.7% | 66.0% |
| 4357827 | 3455.1.1.0 ↗ | alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors | 0.61 | 43.0 | 4.37e-01 | 75.0% | 94.2% |
| 3717958 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 50.0 | 2.93e-01 | 95.8% | 22.9% |
| 4031740 | 622.1.1.0 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain | 0.60 | 42.0 | 4.04e-01 | 75.0% | 88.1% |
| 4977808 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.59 | 41.0 | 4.20e-01 | 75.0% | 100.0% |
| 4012795 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.57 | 40.0 | 2.50e-01 | 75.0% | 83.0% |
| 3568235 | 192.15.1.165 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › zf-B_box | 0.56 | 33.0 | 2.34e-01 | 70.8% | 20.5% |
| 3480264 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.56 | 40.0 | 3.76e-01 | 77.8% | 80.0% |
| 3736736 | 7516.1.1.20 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_34 | 0.56 | 44.0 | 2.90e-01 | 98.6% | 18.5% |
| 4944477 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 47.0 | 3.51e-01 | 94.4% | 97.3% |
| 4999686 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.55 | 39.0 | 3.95e-01 | 77.8% | 96.0% |
| 5012651 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.53 | 41.0 | 3.91e-01 | 83.3% | 88.2% |
| 4224489 | 4156.1.1.4 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C | 0.51 | 42.0 | 2.72e-01 | 98.6% | 72.3% |