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KM083128.1__AII28220.1__PBI_SPARKY_76__00072
Bact-VirKM083128.1__AII28220.1__PBI_SPARKY_76__00072
Identity
- Accession:
- KM083128 ↗
- Kingdom:
- phage
Quality
88.2
mean pLDDT
Taxonomy
TaxID: 1527493
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 22-68_119-131
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jm7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 36.0 | 3.08e-01 | 75.0% | 83.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3696813 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.55 | 38.0 | 3.40e-01 | 73.3% | 85.6% |
| 3740618 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.54 | 38.0 | 3.43e-01 | 75.0% | 91.8% |
D2
medium
residues 69-118_156-216
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 31.0 | 3.62e-01 | 84.7% | 80.3% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 25.0 | 3.02e-01 | 90.1% | 65.1% |
| 4nn5C01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 30.0 | 3.39e-01 | 82.9% | 76.2% |
| 3g7mA00 | 2.60.110.10 | Mainly Beta › Sandwich › Thaumatin › Thaumatin | 0.51 | 44.0 | 3.99e-01 | 94.6% | 81.5% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 26.0 | 3.09e-01 | 91.9% | 70.8% |
| 1p3hB00 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.51 | 30.0 | 3.17e-01 | 84.7% | 66.3% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2794379 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.54 | 29.0 | 3.15e-01 | 84.7% | 61.1% |
| 5029394 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.52 | 44.0 | 3.60e-01 | 93.7% | 88.4% |
| 3885460 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.52 | 26.0 | 2.96e-01 | 78.4% | 61.2% |
| 3270749 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.51 | 29.0 | 3.31e-01 | 95.5% | 75.0% |