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KM083128.1__AII28226.1__PBI_SPARKY_82__00078
Bact-VirKM083128.1__AII28226.1__PBI_SPARKY_82__00078
Identity
- Accession:
- KM083128 ↗
- Kingdom:
- phage
Quality
64.3
mean pLDDT
Taxonomy
TaxID: 1527493
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-89
D2
high
residues 105-182
Domain cluster:
rep: NC_023690.1__YP_009011952.1__CM09_gp053__00053__D15-88
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.70 | 43.0 | 3.88e-01 | 94.9% | 47.1% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.65 | 39.0 | 3.03e-01 | 94.9% | 27.9% |
| 6iccA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.62 | 42.0 | 4.12e-01 | 89.7% | 64.0% |
| 3a32A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.60 | 52.0 | 4.32e-01 | 98.7% | 66.7% |
| 1b78A00 | 3.90.950.10 | Alpha Beta › Alpha-Beta Complex › Maf protein › | 0.59 | 50.0 | 3.85e-01 | 94.9% | 46.2% |
| 2o95B00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.59 | 49.0 | 3.96e-01 | 100.0% | 71.0% |
| 5aykA07 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 46.0 | 4.14e-01 | 88.5% | 87.8% |
| 3licA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 47.0 | 3.70e-01 | 92.3% | 51.1% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.57 | 46.0 | 4.32e-01 | 91.0% | 85.0% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.56 | 47.0 | 3.77e-01 | 100.0% | 69.3% |
| 2wozA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.56 | 45.0 | 3.11e-01 | 92.3% | 88.3% |
| 2ky6A00 | 2.40.290.30 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › Mediator complex subunit 25, ACID domain | 0.55 | 49.0 | 3.84e-01 | 100.0% | 53.6% |
| 1rypC00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 47.0 | 3.41e-01 | 100.0% | 52.9% |
| 1odhA01 | 2.20.25.670 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › GCM domain, large subdomain | 0.54 | 32.0 | 3.36e-01 | 94.9% | 62.0% |
| 1jeyA02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.54 | 47.0 | 4.07e-01 | 98.7% | 76.2% |
| 1s1dA00 | 2.120.10.100 | Mainly Beta › 6 Propeller › Neuraminidase › Apyrase | 0.53 | 41.0 | 2.79e-01 | 84.6% | 50.2% |
| 1e5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 38.0 | 3.08e-01 | 76.9% | 47.0% |
| 4ywzB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 42.0 | 3.56e-01 | 93.6% | 51.4% |
| 2vneA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 38.0 | 3.01e-01 | 79.5% | 36.8% |
| 8djfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 42.0 | 3.01e-01 | 94.9% | 86.0% |
| 2yh9B00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.51 | 31.0 | 3.32e-01 | 82.1% | 69.1% |
| 3rgaA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 41.0 | 3.46e-01 | 88.5% | 88.0% |
| 2jkbA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 42.0 | 2.80e-01 | 96.2% | 46.4% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 36.0 | 3.22e-01 | 89.7% | 53.7% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4992282 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.68 | 41.0 | 3.38e-01 | 94.9% | 34.1% |
| 5047353 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.63 | 44.0 | 3.81e-01 | 73.1% | 51.2% |
| 3689672 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.61 | 45.0 | 2.93e-01 | 80.8% | 47.0% |
| 5044346 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.60 | 43.0 | 3.91e-01 | 75.6% | 53.6% |
| 5049973 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 41.0 | 3.45e-01 | 73.1% | 42.1% |
| 4406596 | 210.1.1.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › IMP_cyclohyd | 0.58 | 51.0 | 3.80e-01 | 100.0% | 52.4% |
| 5079075 | 7592.1.1.0 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains | 0.58 | 47.0 | 3.74e-01 | 93.6% | 90.9% |
| 139131 | 223.1.1.51 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › MCP-like_PDC_1 | 0.58 | 47.0 | 3.70e-01 | 92.3% | 51.4% |
| 4992167 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.57 | 47.0 | 2.94e-01 | 94.9% | 37.8% |
| 3433338 | 5.1.5.86 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Kelch_1 | 0.55 | 46.0 | 3.06e-01 | 91.0% | 95.0% |
| 3260045 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.55 | 42.0 | 4.27e-01 | 100.0% | 84.0% |
| 3695948 | 5.1.4.56 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NUP214 | 0.55 | 48.0 | 3.01e-01 | 100.0% | 28.8% |
| None | — | 0.54 | 42.0 | 2.86e-01 | 85.9% | 41.8% | |
| 3537353 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.54 | 41.0 | 2.81e-01 | 84.6% | 37.7% |
| 4953226 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 35.0 | 3.73e-01 | 98.7% | 80.0% |
| 4881743 | 5.1.2.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DPPIV_N | 0.53 | 47.0 | 2.93e-01 | 100.0% | 37.8% |
| 3902978 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.53 | 44.0 | 2.94e-01 | 92.3% | 89.7% |
| 3630412 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 44.0 | 2.86e-01 | 93.6% | 80.8% |
| 3831579 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.52 | 42.0 | 2.88e-01 | 92.3% | 91.7% |
| 3307408 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.51 | 34.0 | 3.24e-01 | 94.9% | 57.8% |
| 3641841 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.51 | 43.0 | 2.99e-01 | 100.0% | 39.0% |
| 3853654 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.51 | 41.0 | 2.84e-01 | 92.3% | 98.1% |
| 4999215 | 3281.1.1.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M | 0.51 | 41.0 | 2.59e-01 | 92.3% | 40.6% |
| 3944684 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 41.0 | 3.16e-01 | 91.0% | 49.2% |
| 4553924 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.51 | 41.0 | 2.75e-01 | 93.6% | 27.2% |
| 3811378 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.51 | 44.0 | 2.90e-01 | 97.4% | 37.4% |
| 4027676 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 44.0 | 2.85e-01 | 98.7% | 36.9% |
| 5008672 | 5.1.8.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › DPPIV_N | 0.51 | 42.0 | 3.85e-01 | 94.9% | 100.0% |
| 3518867 | 223.1.1.35 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 | 0.51 | 40.0 | 3.47e-01 | 91.0% | 62.2% |
| 3978937 | 223.1.1.35 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 | 0.51 | 41.0 | 3.13e-01 | 91.0% | 49.2% |
| 4061414 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.51 | 43.0 | 2.87e-01 | 100.0% | 35.2% |