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KM101122.1__AIK69149.1__PBI_HADES_42__00042

Bact-Vir

KM101122.1__AIK69149.1__PBI_HADES_42__00042

Identity

Accession:
KM101122 ↗
Kingdom:
phage

Quality

74.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Cheoctovirus› Mycobacterium_phage_Hades

TaxID: 1527511

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-68
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09722.16 best Xre_MbcA_ParS_C 27.8 2.90e-06 90.0% 64.7%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3tzlA02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.65 46.0 3.73e-01 100.0% 37.5%
2el7A02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.60 42.0 3.55e-01 100.0% 41.5%
2yviA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.55 45.0 3.89e-01 100.0% 78.7%
2pmrA00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.51 44.0 3.87e-01 100.0% 76.3%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3952322 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.97 92.0 6.92e-01 100.0% 47.6%
3962562 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.94 84.0 6.38e-01 100.0% 45.7%
2453093 101.1.4.13 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Xre_MbcA_ParS_C 0.90 82.0 6.19e-01 100.0% 45.0%
5040644 101.1.4.93 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Xre-like-HTH 0.90 82.0 5.90e-01 100.0% 40.8%
4218671 101.1.4.14 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Xre_MbcA_ParS_C,Xre-like-HTH 0.89 82.0 5.81e-01 100.0% 39.3%
4555054 101.1.4.14 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Xre_MbcA_ParS_C,Xre-like-HTH 0.89 80.0 6.13e-01 100.0% 49.1%
4116978 101.30.1.1 ↗ alpha arrays › HTH › Rv2175c › Rv2175c › Xre_MbcA_ParS_C 0.89 80.0 7.30e-01 100.0% 81.5%
3971256 101.1.4.13 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Xre_MbcA_ParS_C 0.88 79.0 6.43e-01 100.0% 57.8%
3088114 101.1.4.14 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Xre_MbcA_ParS_C,Xre-like-HTH 0.86 78.0 5.67e-01 100.0% 41.3%
2491422 101.30.1.1 ↗ alpha arrays › HTH › Rv2175c › Rv2175c › Xre_MbcA_ParS_C 0.83 74.0 6.56e-01 100.0% 84.7%
4311945 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.80 71.0 5.20e-01 100.0% 59.2%
3682972 3161.1.1.1 ↗ alpha duplicates or obligate multimers › LOB domain › LOB domain › LOB domain › LOB 0.64 48.0 3.89e-01 86.0% 70.0%
5025683 4957.1.1.0 ↗ a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit 0.62 45.0 4.43e-01 100.0% 74.5%
4188728 4049.1.1.1 ↗ alpha superhelices › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › CysG_dimeriser 0.61 53.0 5.02e-01 100.0% 83.3%
4462712 103.1.1.6 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.60 49.0 4.65e-01 100.0% 78.3%
4981749 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.55 45.0 4.34e-01 100.0% 83.3%
3273610 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.50 42.0 3.48e-01 100.0% 77.0%
4024083 509.1.1.0 ↗ alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain 0.50 42.0 4.01e-01 94.0% 80.0%