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KM199771.1__AIK68489.1__Lo5R7ANS_19__00019

Bact-Vir

KM199771.1__AIK68489.1__Lo5R7ANS_19__00019

Identity

Accession:
KM199771 ↗
Kingdom:
phage

Quality

81.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Pairvirus› Mesorhizobium_phage_vB_MloP_Lo5R7ANS

TaxID: 1527771

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-65
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 39.0 3.16e-01 77.0% 31.2%
2yskA00 1.10.490.110 Mainly Alpha › Orthogonal Bundle › Globin-like › Uncharacterized conserved protein DUF2267 0.59 50.0 3.80e-01 93.4% 54.9%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.58 42.0 3.62e-01 75.4% 79.3%
1hr6B02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.57 42.0 2.87e-01 77.0% 62.5%
1v4gA01 6.10.140.800 Special › Helix non-globular › Helix Hairpins › 0.56 39.0 3.74e-01 72.1% 84.1%
1zarA03 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.55 40.0 3.55e-01 82.0% 70.1%
1gzsB00 1.10.4120.10 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › SopE-like, GEF domain 0.55 45.0 3.24e-01 88.5% 82.4%
3dadA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.54 42.0 2.71e-01 86.9% 62.7%
4f3hA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.54 40.0 2.86e-01 88.5% 74.9%
4mbsA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.54 41.0 2.51e-01 80.3% 14.2%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.54 38.0 2.77e-01 75.4% 37.7%
3ca8A01 1.10.3620.10 Mainly Alpha › Orthogonal Bundle › YdcF fold › YdcF like domain 0.53 41.0 3.55e-01 90.2% 67.9%
3ckiB00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 46.0 3.75e-01 100.0% 80.2%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3439198 192.17.1.0 ↗ alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like 0.65 36.0 3.60e-01 70.5% 52.3%
4611933 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.64 45.0 3.38e-01 75.4% 52.0%
3337373 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.63 44.0 3.12e-01 80.3% 24.3%
3325528 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.63 43.0 3.14e-01 80.3% 25.9%
3305761 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.62 43.0 3.17e-01 80.3% 28.4%
3775772 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.58 46.0 2.97e-01 88.5% 41.0%
3655858 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.58 44.0 3.20e-01 80.3% 45.8%
3450582 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.57 43.0 3.33e-01 80.3% 53.8%
5007460 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.56 44.0 2.84e-01 83.6% 50.7%
4985912 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.56 44.0 2.82e-01 83.6% 52.0%
3989794 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.56 43.0 2.81e-01 83.6% 52.4%
3225057 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.55 40.0 2.94e-01 80.3% 48.6%
3928014 386.1.1.0 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.54 32.0 3.71e-01 88.5% 100.0%
3774674 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.54 45.0 2.81e-01 91.8% 47.0%
4243645 102.1.1.24 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 0.53 39.0 2.85e-01 78.7% 82.9%
4321047 102.1.1.27 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.53 37.0 2.72e-01 73.8% 39.1%
3622481 604.29.1.1 ↗ alpha bundles › Spectrin repeat-like › Trehalose-6-phosphate phosphatase N-terminal helical bundle › Trehalose-6-phosphate phosphatase N-terminal helical bundle › T6PP_N 0.52 41.0 3.35e-01 85.2% 92.2%
4318949 102.1.1.81 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 0.52 40.0 2.88e-01 83.6% 80.6%
4346610 102.1.1.27 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.52 38.0 2.76e-01 78.7% 78.2%
4955657 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.52 43.0 2.80e-01 93.4% 90.9%
5008285 5065.1.1.3 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 0.51 44.0 2.89e-01 98.4% 94.1%
3343788 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.50 38.0 2.83e-01 80.3% 48.1%
4999090 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.50 38.0 2.97e-01 82.0% 71.5%