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KM199771.1__AIK68528.1__Lo5R7ANS_58__00058

Bact-Vir

KM199771.1__AIK68528.1__Lo5R7ANS_58__00058

Identity

Accession:
KM199771 ↗
Kingdom:
phage

Quality

93.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Pairvirus› Mesorhizobium_phage_vB_MloP_Lo5R7ANS

TaxID: 1527771

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-46
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3oyyB03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 45.0 4.20e-01 91.1% 96.6%
2ehrA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.56 49.0 3.63e-01 100.0% 66.7%
7btoI01 3.90.220.20 Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains 0.53 42.0 3.06e-01 97.8% 45.5%
D2 high residues 55-134
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.67 47.0 5.03e-01 87.5% 85.5%
2go7A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.67 48.0 5.11e-01 88.7% 89.6%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 44.0 3.74e-01 71.2% 75.2%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 33.0 4.06e-01 75.0% 81.2%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 40.0 4.48e-01 100.0% 86.2%
3dv9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.63 45.0 4.72e-01 87.5% 85.7%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 51.0 5.12e-01 93.8% 95.1%
2in3A02 1.10.472.60 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › putative protein disulfide isomerase domain 0.61 48.0 4.19e-01 88.7% 56.1%
4ex6A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 43.0 4.59e-01 87.5% 89.6%
4eekA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.60 43.0 4.63e-01 87.5% 90.9%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.59 47.0 4.77e-01 86.3% 97.5%
2ewtA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 47.0 4.91e-01 88.7% 100.0%
3kzqA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.59 47.0 3.50e-01 87.5% 52.9%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.58 32.0 3.95e-01 76.2% 100.0%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 44.0 4.53e-01 87.5% 91.9%
4oazA00 1.10.10.1930 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 45.0 4.59e-01 93.8% 93.3%
2iw3A02 1.20.1390.20 Mainly Alpha › Up-down Bundle › PWI domain › 0.56 44.0 4.33e-01 87.5% 88.9%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.56 42.0 4.52e-01 91.3% 98.5%
3nqxA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.55 43.0 3.66e-01 88.7% 94.5%
3gdzB00 3.30.1360.70 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Arginyl tRNA synthetase N-terminal domain 0.54 40.0 3.67e-01 87.5% 58.9%
3zc4A01 1.20.120.1610 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.54 40.0 3.93e-01 82.5% 82.2%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 33.0 3.65e-01 86.3% 75.4%
1f5qB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 41.0 3.54e-01 87.5% 65.9%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.52 37.0 3.54e-01 90.0% 62.8%
3fhnA05 1.10.10.2270 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Dsl1p vesicle tethering complex, Tip20p subunit, domain E 0.52 33.0 3.57e-01 80.0% 76.1%
5li7A00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.51 39.0 2.59e-01 85.0% 57.9%
4fqgB03 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.50 33.0 3.53e-01 75.0% 81.8%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1153722 3009.1.1.0 ↗ alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like 0.67 48.0 5.29e-01 85.0% 98.4%
1589463 3009.1.1.0 ↗ alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like 0.67 50.0 5.34e-01 83.7% 95.5%
3924261 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.67 42.0 4.38e-01 75.0% 68.0%
4959768 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.67 39.0 4.37e-01 76.2% 76.7%
4929738 6049.1.1.0 ↗ alpha bundles › PH0832-like › PH0832-like › PH0832-like 0.66 55.0 5.65e-01 90.0% 100.0%
1806509 3009.1.1.0 ↗ alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like 0.65 46.0 4.35e-01 87.5% 61.2%
4637053 101.35.1.21 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › DUF494 0.64 38.0 4.47e-01 77.5% 94.0%
3059487 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.62 51.0 5.01e-01 92.5% 90.7%
3519655 101.1.10.33 ↗ alpha arrays › HTH › HTH › Cyclin-like › Rrn7_cyclin_C 0.61 43.0 3.48e-01 75.0% 97.4%
5081193 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.60 36.0 3.96e-01 77.5% 73.8%
4030506 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.60 48.0 4.63e-01 91.3% 100.0%
160875 101.1.4.18 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.59 47.0 4.91e-01 88.7% 100.0%
3475297 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 50.0 4.67e-01 100.0% 93.3%
1121948 101.1.2.184 ↗ alpha arrays › HTH › HTH › winged helix domain › BldD-like_C 0.58 47.0 4.56e-01 93.8% 79.8%
3288109 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.58 46.0 4.80e-01 91.3% 100.0%
3976896 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.56 43.0 3.22e-01 85.0% 35.6%
3591055 101.1.4.3 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.56 42.0 3.89e-01 88.7% 61.9%
3179612 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.56 42.0 4.45e-01 85.0% 94.3%
3479694 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 40.0 3.98e-01 77.5% 82.4%
4979632 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.54 44.0 3.50e-01 92.5% 64.4%
3616804 4308.1.1.1 ↗ a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR 0.54 43.0 3.37e-01 90.0% 41.1%
3703222 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.54 46.0 4.44e-01 100.0% 97.9%
3528821 108.1.1.96 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.53 44.0 4.22e-01 96.2% 93.7%
5009557 102.1.2.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase 0.53 41.0 4.24e-01 87.5% 93.3%
3403481 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 39.0 3.85e-01 83.7% 88.2%
3229333 5001.1.1.59 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Sri 0.51 42.0 2.86e-01 93.8% 85.5%
4177229 3009.1.1.6 ↗ alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › DUF222 0.50 31.0 2.95e-01 75.0% 52.7%