←Back to structures

KM199771.1__AIK68530.1__Lo5R7ANS_60__00060

Bact-Vir

KM199771.1__AIK68530.1__Lo5R7ANS_60__00060

Identity

Accession:
KM199771 ↗
Kingdom:
phage

Quality

86.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Autographivirales› Pairvirus› Mesorhizobium_phage_vB_MloP_Lo5R7ANS

TaxID: 1527771

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-75
PDB
Domain cluster: rep: MN270890.1__QFP93736.1__X__00019__D13-71
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3s95A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 36.0 3.28e-01 73.5% 40.9%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 43.0 3.48e-01 76.5% 65.7%
3bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 42.0 3.42e-01 76.5% 66.2%
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 3.46e-01 76.5% 77.2%
6uf3A00 3.40.630.190 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein 0.57 40.0 2.73e-01 73.5% 97.6%
2iqcA00 1.25.40.490 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 47.0 3.53e-01 97.1% 49.7%
3u37A02 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.52 39.0 2.70e-01 80.9% 60.5%
2uv8A05 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 43.0 2.60e-01 98.5% 77.6%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.26e-01 86.8% 79.7%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 3.51e-01 76.5% 100.0%
1djqA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.51 42.0 2.64e-01 91.2% 67.2%
3ll3B02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 43.0 3.03e-01 98.5% 76.3%
2dy1A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.50 35.0 3.40e-01 89.7% 65.8%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3805761 614.1.1.0 ↗ alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain 0.62 41.0 4.06e-01 72.1% 62.7%
3097754 823.1.1.1 ↗ a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › gpW 0.59 42.0 4.37e-01 76.5% 89.2%
3429256 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.58 42.0 2.64e-01 76.5% 29.5%
4940192 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.58 42.0 3.58e-01 76.5% 64.9%
3553628 109.4.1.120 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Kinetochor_Ybp2 0.55 48.0 3.08e-01 100.0% 33.4%
3630540 3877.1.1.0 ↗ alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.54 46.0 3.15e-01 98.5% 77.4%
3325733 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.54 26.0 3.03e-01 77.9% 62.0%
3942409 3355.1.1.3 ↗ alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › ABG_transport 0.54 43.0 2.65e-01 91.2% 71.5%
3593736 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.54 39.0 3.46e-01 76.5% 64.0%
3649913 5050.1.1.58 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › NFD4_C 0.54 46.0 3.52e-01 100.0% 50.6%
3269126 109.4.1.1265 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PUF, PUF_NOP9 0.53 46.0 2.73e-01 100.0% 26.5%
4605893 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.53 41.0 3.28e-01 85.3% 77.1%
3544534 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.52 37.0 3.55e-01 76.5% 71.2%
3862747 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.52 37.0 3.48e-01 76.5% 65.9%
3414803 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.52 43.0 2.83e-01 98.5% 86.4%
3699463 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.52 36.0 2.67e-01 76.5% 63.3%
3279061 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.51 34.0 3.46e-01 85.3% 68.6%
3717340 605.1.1.155 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Gpi1 0.51 38.0 2.74e-01 80.9% 49.0%
4233293 268.2.1.1 ↗ a+b two layers › Sterol carrier protein-like › LytR-Cps2A-Psr (LCP) enzymes › LytR-Cps2A-Psr (LCP) enzymes › LytR_cpsA_psr 0.51 39.0 2.74e-01 91.2% 32.9%
4030181 148.1.3.17 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM_lid 0.51 37.0 2.83e-01 86.8% 31.8%
3581763 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.51 35.0 3.55e-01 89.7% 71.4%
5019583 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 36.0 3.25e-01 76.5% 86.0%
5041293 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.50 34.0 3.12e-01 70.6% 75.6%
3407025 603.2.1.0 ↗ alpha bundles › STAT-like › STAT › STAT 0.50 42.0 2.76e-01 100.0% 67.1%
3287847 304.3.1.1 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.50 33.0 3.44e-01 86.8% 72.3%
5046985 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.50 36.0 2.47e-01 75.0% 22.2%