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KM209320.1__AIM51882.1__HQ81_0169__00166
Bact-VirKM209320.1__AIM51882.1__HQ81_0169__00166
Identity
- Accession:
- KM209320 ↗
- Kingdom:
- phage
Quality
88.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Dickeya_phage_phiDP23.1
TaxID: 1542133
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 47-208
Domain cluster:
rep: LC168164.1__BAX25550.1__BPT24_051__00051__D164-307
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kptA00 | 3.10.310.50 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.75 | 55.0 | 5.78e-01 | 77.2% | 82.4% |
| 3g98A00 | 3.10.310.40 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.67 | 45.0 | 5.37e-01 | 71.6% | 100.0% |
| 5t5sA01 | 3.10.310.40 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.60 | 46.0 | 5.12e-01 | 87.7% | 100.0% |
| 5hfjC00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 43.0 | 4.02e-01 | 80.9% | 96.6% |
| 2zejB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 32.0 | 3.88e-01 | 85.2% | 90.1% |
| 7y7oA01 | 3.40.390.30 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" | 0.55 | 38.0 | 3.99e-01 | 79.0% | 79.0% |
| 6vloD01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 40.0 | 3.66e-01 | 75.9% | 89.0% |
| 5jnmA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 40.0 | 3.74e-01 | 77.8% | 93.6% |
| 1tviA00 | 3.40.390.30 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" | 0.53 | 37.0 | 3.81e-01 | 76.5% | 75.3% |
| 3e48A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 39.0 | 3.76e-01 | 77.2% | 89.6% |
| 2o3jB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 38.0 | 3.50e-01 | 75.9% | 88.1% |
| 5egnA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 3.58e-01 | 86.4% | 98.8% |
| 2fx5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 44.0 | 3.81e-01 | 94.4% | 89.1% |
| 2r11D00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 42.0 | 3.50e-01 | 88.3% | 88.5% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4122042 | 3105.1.1.1 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › TPM_phosphatase | 0.77 | 58.0 | 6.32e-01 | 77.8% | 94.1% |
| 3823301 | 3105.1.1.1 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › TPM_phosphatase | 0.68 | 53.0 | 5.64e-01 | 84.6% | 94.3% |
| 4338232 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.67 | 49.0 | 5.57e-01 | 84.0% | 100.0% |
| 4948107 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.67 | 49.0 | 5.59e-01 | 84.0% | 100.0% |
| 5023219 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.67 | 48.0 | 5.44e-01 | 84.0% | 98.3% |
| 4339017 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.67 | 50.0 | 5.56e-01 | 84.6% | 96.9% |
| 4389751 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.66 | 49.0 | 5.54e-01 | 87.7% | 100.0% |
| 4491861 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.65 | 49.0 | 5.50e-01 | 84.6% | 100.0% |
| 4628908 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.65 | 50.0 | 5.48e-01 | 85.8% | 98.5% |
| 4294658 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.65 | 50.0 | 5.53e-01 | 87.7% | 100.0% |
| 4099652 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.65 | 48.0 | 5.45e-01 | 84.0% | 100.0% |
| 4064283 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.65 | 49.0 | 5.11e-01 | 87.0% | 85.1% |
| 4566002 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.65 | 48.0 | 5.41e-01 | 84.6% | 100.0% |
| 5061891 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.64 | 45.0 | 5.15e-01 | 87.7% | 99.2% |
| 5036583 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.64 | 48.0 | 5.35e-01 | 85.8% | 98.5% |
| 4101419 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.64 | 49.0 | 5.39e-01 | 85.8% | 99.2% |
| 4436952 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.64 | 49.0 | 5.38e-01 | 85.8% | 97.8% |
| 4944168 | 244.4.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases | 0.63 | 33.0 | 4.47e-01 | 74.1% | 100.0% |
| 4222901 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.63 | 47.0 | 5.29e-01 | 84.6% | 100.0% |
| 4672117 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.63 | 47.0 | 5.29e-01 | 85.2% | 100.0% |
| 4130263 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.63 | 48.0 | 5.27e-01 | 87.7% | 99.2% |
| 4377344 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.62 | 48.0 | 5.30e-01 | 87.0% | 100.0% |
| 4466505 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.62 | 49.0 | 5.36e-01 | 88.3% | 99.3% |
| 4928196 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.62 | 45.0 | 5.13e-01 | 87.0% | 100.0% |
| 4066766 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.62 | 46.0 | 5.20e-01 | 84.0% | 100.0% |
| 4158584 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.62 | 48.0 | 5.26e-01 | 86.4% | 100.0% |
| 5055130 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.62 | 46.0 | 5.16e-01 | 86.4% | 100.0% |
| 4174479 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.61 | 42.0 | 4.89e-01 | 85.2% | 98.3% |
| 4198335 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.61 | 44.0 | 5.00e-01 | 86.4% | 100.0% |
| 4102291 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.61 | 45.0 | 4.93e-01 | 89.5% | 94.6% |
| 5079598 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.60 | 43.0 | 4.96e-01 | 84.0% | 100.0% |
| 3454319 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.60 | 47.0 | 5.10e-01 | 87.7% | 98.5% |
| 5051995 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.60 | 46.0 | 5.07e-01 | 83.3% | 97.0% |
| 4984818 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.60 | 45.0 | 4.18e-01 | 77.2% | 96.0% |
| 1933315 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.59 | 45.0 | 4.98e-01 | 87.0% | 97.7% |
| 3709967 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.58 | 44.0 | 4.89e-01 | 81.5% | 100.0% |
| 4279107 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.56 | 33.0 | 3.26e-01 | 80.9% | 51.7% |
| 3736785 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.55 | 41.0 | 3.83e-01 | 77.8% | 77.1% |
| 3800224 | 7579.1.1.21 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Ndr | 0.54 | 44.0 | 3.54e-01 | 88.3% | 85.2% |
| 5073839 | 2008.5.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Uncharacterized protein AF_2093 C-terminal domain › Uncharacterized protein AF_2093 C-terminal domain › DUF6834_C | 0.53 | 38.0 | 4.09e-01 | 72.8% | 88.1% |
| 4086314 | 2003.1.5.293 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › NAD-bd_HRPKS_sdrA | 0.53 | 39.0 | 2.99e-01 | 77.2% | 32.9% |
| 3280439 | 2008.1.1.20 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Uma2 | 0.52 | 42.0 | 4.05e-01 | 85.8% | 83.7% |
| 4958445 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 37.0 | 3.88e-01 | 72.8% | 93.8% |
| 3340014 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 39.0 | 4.16e-01 | 79.6% | 97.1% |
| 2867995 | 2003.1.5.148 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_36 | 0.51 | 34.0 | 2.93e-01 | 86.4% | 40.0% |
| 3412061 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.50 | 37.0 | 3.71e-01 | 77.2% | 88.2% |