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KM224879.1__AII27163.1__ICP22013AHaiti_49__00049

Bact-Vir

KM224879.1__AII27163.1__ICP22013AHaiti_49__00049

Identity

Accession:
KM224879 ↗
Kingdom:
phage

Quality

95.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-81
PDB
Domain cluster: representative
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fymF00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 37.0 2.69e-01 81.6% 20.1%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 4.13e-01 71.1% 93.4%
2ek5B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 49.0 4.48e-01 100.0% 64.2%
2a07J00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 50.0 4.95e-01 100.0% 90.4%
4cgyA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.58 44.0 3.39e-01 100.0% 34.2%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 49.0 4.75e-01 100.0% 86.9%
3b73B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 51.0 4.88e-01 98.7% 86.5%
2mh9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 49.0 4.25e-01 100.0% 87.4%
2p0vA01 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.56 40.0 2.58e-01 100.0% 13.8%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 4.24e-01 89.5% 83.6%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 45.0 4.38e-01 93.4% 81.0%
5ljmA00 1.20.58.2190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 48.0 3.59e-01 100.0% 65.0%
1ussA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 4.41e-01 98.7% 84.1%
7cafA01 1.10.3720.10 Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like 0.55 43.0 2.99e-01 88.2% 75.5%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.54 45.0 3.33e-01 100.0% 32.9%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.60e-01 90.8% 48.6%
5y6iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 45.0 4.58e-01 93.4% 94.5%
3cdhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 3.60e-01 86.8% 53.7%
6ketA01 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.54 39.0 2.53e-01 76.3% 28.4%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.55e-01 92.1% 47.8%
4jqfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 4.11e-01 98.7% 89.0%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 42.0 3.31e-01 84.2% 48.7%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 45.0 4.10e-01 96.1% 76.2%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 4.38e-01 89.5% 93.0%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 4.02e-01 96.1% 68.9%
8be0A01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.53 41.0 3.13e-01 85.5% 95.3%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 4.51e-01 90.8% 94.4%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 4.38e-01 90.8% 93.2%
2p6rA03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.53 45.0 3.37e-01 100.0% 38.5%
2l4mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 4.14e-01 85.5% 89.9%
3df8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 3.90e-01 90.8% 64.2%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.72e-01 100.0% 60.0%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 4.14e-01 92.1% 85.5%
2vqmA00 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.52 40.0 2.61e-01 85.5% 36.6%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 43.0 4.12e-01 92.1% 80.9%
1yg2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 43.0 4.33e-01 93.4% 91.1%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 4.00e-01 94.7% 89.3%
2jiiA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.50 39.0 2.96e-01 86.8% 96.0%
5u89A02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.50 37.0 2.99e-01 81.6% 68.7%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3713637 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 54.0 4.69e-01 81.6% 95.7%
3832037 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 52.0 3.50e-01 90.8% 30.0%
4479128 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.61 48.0 3.62e-01 84.2% 92.4%
3972365 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 50.0 3.78e-01 89.5% 94.1%
4028433 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 43.0 4.31e-01 85.5% 71.2%
4451152 1015.1.1.0 alpha complex topology › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs 0.60 45.0 3.10e-01 80.3% 78.2%
4941477 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 49.0 4.53e-01 100.0% 70.0%
4588732 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.59 50.0 4.29e-01 100.0% 97.8%
3282556 101.1.2.643 alpha arrays › HTH › HTH › winged helix domain › AAA_assoc_C 0.59 48.0 4.73e-01 97.4% 86.3%
4946850 604.39.1.1 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › CbiM 0.59 47.0 3.34e-01 86.8% 75.1%
4927189 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 43.0 4.02e-01 77.6% 83.2%
4998400 604.39.1.1 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › CbiM 0.59 42.0 3.09e-01 82.9% 27.6%
3935109 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.59 46.0 3.13e-01 85.5% 62.1%
4017936 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 47.0 4.45e-01 97.4% 74.7%
3228605 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.58 48.0 3.61e-01 90.8% 44.3%
5061575 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 48.0 4.40e-01 90.8% 87.0%
3236724 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 47.0 4.33e-01 94.7% 67.6%
4021477 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 48.0 4.72e-01 100.0% 84.7%
4986778 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.57 48.0 4.06e-01 89.5% 69.2%
5057064 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.57 48.0 4.19e-01 89.5% 77.3%
3876302 101.1.2.206 alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH 0.57 44.0 4.05e-01 98.7% 62.9%
3452232 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 49.0 3.59e-01 96.1% 88.8%
4560206 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.57 48.0 4.60e-01 94.7% 95.6%
4276676 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.56 40.0 4.08e-01 93.4% 80.0%
4944605 4156.1.1.0 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.56 40.0 3.00e-01 77.6% 37.7%
3229656 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 47.0 4.34e-01 96.1% 80.6%
3693546 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.56 49.0 4.44e-01 100.0% 75.2%
3928777 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.56 46.0 4.20e-01 100.0% 67.3%
3166551 101.1.2.407 alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.55 47.0 4.14e-01 100.0% 74.2%
5048467 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 45.0 3.65e-01 93.4% 46.9%
3462112 101.1.2.10 alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.55 44.0 4.26e-01 85.5% 85.9%
5083960 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.55 41.0 3.16e-01 82.9% 91.1%
3782381 101.1.2.407 alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.55 46.0 4.05e-01 100.0% 76.0%
5047904 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.55 47.0 4.51e-01 100.0% 85.6%
3581591 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.54 48.0 4.50e-01 100.0% 91.6%
4965164 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.54 46.0 4.32e-01 96.1% 92.6%
3387388 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.54 47.0 4.06e-01 100.0% 94.4%
4961793 101.1.2.929 alpha arrays › HTH › HTH › winged helix domain › HVO_2833_C 0.54 44.0 2.94e-01 88.2% 46.6%
5067264 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.54 42.0 3.66e-01 92.1% 54.2%
4120593 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 47.0 3.80e-01 100.0% 55.3%
4956415 101.1.2.18 alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S19e 0.54 43.0 3.38e-01 86.8% 75.6%
3487912 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 46.0 4.16e-01 100.0% 77.3%
3935822 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.54 46.0 4.44e-01 100.0% 87.8%
4976469 5059.1.1.1 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.53 40.0 2.71e-01 80.3% 53.9%
3647082 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 47.0 4.37e-01 97.4% 83.2%
4944400 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 4.04e-01 90.8% 82.9%
4933236 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 41.0 3.79e-01 97.4% 63.6%
5047367 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 43.0 4.14e-01 93.4% 92.2%
3997739 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.53 40.0 3.09e-01 85.5% 69.7%
3483301 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.52 34.0 2.81e-01 86.8% 33.3%
3902903 601.21.1.2 alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr,FAD_SOX 0.52 43.0 3.19e-01 100.0% 96.8%
3647654 4156.1.1.0 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.52 46.0 3.27e-01 100.0% 97.1%
3439131 101.1.2.407 alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.52 44.0 4.00e-01 100.0% 69.7%
4942265 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 42.0 4.08e-01 97.4% 82.4%
4994270 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.52 43.0 4.37e-01 90.8% 94.7%
5047660 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 36.0 3.71e-01 93.4% 76.0%
5078889 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 40.0 3.47e-01 96.1% 53.6%
4195219 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.51 41.0 3.84e-01 93.4% 85.0%
3532393 5050.1.1.6 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP 0.51 43.0 2.97e-01 97.4% 71.2%
4315437 2484.1.1.97 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas9_RuvC 0.50 37.0 2.54e-01 78.9% 37.7%
4994588 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 37.0 3.35e-01 81.6% 58.0%