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KM233261.1__AIM40683.1__SUFP_052__00052
Bact-VirKM233261.1__AIM40683.1__SUFP_052__00052
Identity
- Accession:
- KM233261 ↗
- Kingdom:
- phage
Quality
84.7
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-136
Domain cluster:
rep: NC_041929.1__YP_009601126.1__FDH46_gp001__00001__D5-90
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n9eA01 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.67 | 47.0 | 3.01e-01 | 71.6% | 61.6% |
| 3pgbA01 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.67 | 46.0 | 2.98e-01 | 71.6% | 60.7% |
| 2fpnA01 | 3.30.2030.10 | Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like | 0.65 | 41.0 | 3.84e-01 | 74.1% | 52.9% |
| 1pu4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.64 | 46.0 | 3.12e-01 | 74.1% | 76.7% |
| 1x7dB01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.63 | 52.0 | 4.61e-01 | 99.1% | 60.9% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.62 | 52.0 | 4.76e-01 | 99.1% | 69.1% |
| 3zpmA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.60 | 47.0 | 3.88e-01 | 83.6% | 56.4% |
| 3klxB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 38.0 | 3.28e-01 | 70.7% | 41.4% |
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 41.0 | 2.98e-01 | 71.6% | 69.0% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 38.0 | 3.60e-01 | 81.9% | 56.3% |
| 4kghA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.57 | 44.0 | 3.76e-01 | 82.8% | 60.6% |
| 4eg9A00 | 2.50.20.40 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.56 | 44.0 | 3.55e-01 | 85.3% | 63.2% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.53 | 42.0 | 3.03e-01 | 86.2% | 47.2% |
| 3qktD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 43.0 | 3.10e-01 | 86.2% | 43.1% |
| 4h5bA00 | 3.30.1460.70 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 47.0 | 4.34e-01 | 100.0% | 76.3% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.52 | 38.0 | 3.66e-01 | 75.0% | 70.2% |
| 2pcsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 37.0 | 3.42e-01 | 82.8% | 55.9% |
| 1qhlA00 | 3.40.1140.10 | Alpha Beta › 3-Layer(aba) Sandwich › N-terminal domain of mukB › | 0.51 | 44.0 | 3.70e-01 | 94.8% | 99.0% |
| 4bd4A00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.51 | 41.0 | 4.28e-01 | 89.7% | 92.7% |
| 5w0kA01 | 3.90.380.20 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Herpesvirus glycoprotein H, domain D-II | 0.51 | 41.0 | 3.00e-01 | 86.2% | 63.7% |
| 3qf7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 44.0 | 3.25e-01 | 92.2% | 79.6% |
| 1kyfA01 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.50 | 43.0 | 4.14e-01 | 100.0% | 81.3% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3326913 | 12.3.1.2 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid | 0.68 | 48.0 | 3.64e-01 | 71.6% | 88.8% |
| 3812869 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.66 | 46.0 | 4.89e-01 | 99.1% | 81.0% |
| 5053021 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.63 | 42.0 | 4.71e-01 | 86.2% | 86.7% |
| 4955671 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.63 | 42.0 | 4.93e-01 | 89.7% | 97.5% |
| 3319085 | 4099.1.1.27 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › DUF7806 | 0.61 | 44.0 | 4.66e-01 | 100.0% | 86.0% |
| 3228525 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.61 | 45.0 | 4.67e-01 | 98.3% | 80.9% |
| 3992567 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 48.0 | 4.72e-01 | 85.3% | 78.4% |
| 3667738 | 11.1.1.114 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › COP-gamma_platf | 0.57 | 39.0 | 3.46e-01 | 97.4% | 47.4% |
| 4982498 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 46.0 | 2.85e-01 | 86.2% | 23.3% |
| 4008120 | 5.1.5.139 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1481 | 0.56 | 45.0 | 4.45e-01 | 84.5% | 81.7% |
| 3943894 | 77.1.1.7 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › DUF1481 | 0.55 | 44.0 | 4.29e-01 | 84.5% | 78.4% |
| 3921815 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 40.0 | 2.97e-01 | 75.0% | 32.7% |
| 4944680 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 45.0 | 2.79e-01 | 88.8% | 88.9% |
| 4318843 | 331.3.1.5 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc | 0.54 | 38.0 | 3.56e-01 | 81.0% | 57.9% |
| 1176515 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.53 | 43.0 | 3.73e-01 | 86.2% | 76.8% |
| 3428522 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.53 | 39.0 | 3.13e-01 | 78.4% | 42.1% |
| 222386 | 241.1.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN | 0.52 | 47.0 | 4.34e-01 | 100.0% | 76.3% |
| 169039 | 265.1.1.1 ↗ | a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat | 0.52 | 38.0 | 3.66e-01 | 75.0% | 70.2% |
| 416293 | 2004.1.1.798 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15, AAA_29 | 0.52 | 43.0 | 3.87e-01 | 88.8% | 84.5% |
| 1286610 | 2004.1.1.478 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15, AAA_21 | 0.52 | 43.0 | 3.98e-01 | 88.8% | 91.8% |
| 1167757 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.51 | 43.0 | 3.94e-01 | 88.8% | 91.8% |
| 4972214 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 43.0 | 2.85e-01 | 92.2% | 87.1% |
| 3225806 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 45.0 | 4.47e-01 | 98.3% | 93.3% |
| 4956931 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.50 | 43.0 | 2.79e-01 | 92.2% | 85.9% |
| 4768441 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.50 | 44.0 | 3.73e-01 | 94.8% | 67.9% |