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KM236242.1__AIX12398.1__CPT_Pollock39__00039
Bact-VirKM236242.1__AIX12398.1__CPT_Pollock39__00039
Identity
- Accession:
- KM236242 ↗
- Kingdom:
- phage
Quality
83.9
mean pLDDT
Taxonomy
TaxID: 1540097
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-100
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2obdA02 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.59 | 43.0 | 3.45e-01 | 75.8% | 75.7% |
| 1jyoE00 | 4.10.1330.10 | Few Secondary Structures › Irregular › non globular Virulence effector SptP fold › non globular Virulence effector SptP domain | 0.58 | 32.0 | 3.25e-01 | 73.7% | 52.0% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3197800 | 221.13.1.2 ↗ | a+b two layers › beta-Grasp › Mitochondrial calcium uniporter N-terminal domain › Mitochondrial calcium uniporter N-terminal domain › RRG1_C | 0.59 | 46.0 | 3.82e-01 | 80.8% | 49.1% |
| 1920422 | 3166.1.1.1 ↗ | alpha arrays › 60S ribosomal protein rpL36 (L36e) › 60S ribosomal protein rpL36 (L36e) › 60S ribosomal protein rpL36 (L36e) › Ribosomal_L36e | 0.53 | 29.0 | 2.92e-01 | 77.8% | 49.1% |
| 3680215 | 109.4.1.880 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › LTN1_E3_ligase_6th | 0.52 | 44.0 | 2.63e-01 | 88.9% | 32.6% |
| 3881144 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 42.0 | 2.91e-01 | 88.9% | 27.7% |