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KM236245.1__AIW03230.1__CPT_Mater73__00073

Bact-Vir

KM236245.1__AIW03230.1__CPT_Mater73__00073

Identity

Accession:
KM236245 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Matervirus› Bacillus_phage_Mater

TaxID: 1540090

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-82
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 63.0 6.93e-01 98.5% 100.0%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 58.0 6.06e-01 100.0% 88.1%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 58.0 5.98e-01 100.0% 85.5%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 64.0 5.87e-01 100.0% 71.4%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 56.0 5.96e-01 100.0% 96.5%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.66 60.0 4.70e-01 100.0% 63.9%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 58.0 5.58e-01 100.0% 90.8%
3kf8B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 52.0 4.28e-01 92.4% 80.0%
2le1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 43.0 3.31e-01 84.8% 32.5%
2kcdA00 3.10.450.250 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor 0.61 46.0 3.87e-01 83.3% 50.8%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 53.0 4.99e-01 98.5% 87.5%
3cnwA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 43.0 3.37e-01 84.8% 34.8%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 49.0 4.16e-01 92.4% 79.8%
2qf4A02 2.40.10.350 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 0.58 49.0 4.40e-01 92.4% 93.4%
4emoC00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 47.0 3.94e-01 89.4% 83.6%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 50.0 4.30e-01 100.0% 79.6%
3qdfA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.57 44.0 4.58e-01 100.0% 98.3%
2x45A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 49.0 3.89e-01 100.0% 63.2%
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 48.0 3.74e-01 100.0% 83.9%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 49.0 3.86e-01 100.0% 66.9%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 4.10e-01 98.5% 88.9%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 41.0 3.71e-01 80.3% 63.8%
3lhoA01 3.10.180.50 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 0.56 38.0 2.66e-01 78.8% 20.1%
5c98B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.55 45.0 3.69e-01 92.4% 76.7%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.55 48.0 3.82e-01 100.0% 73.5%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 47.0 3.89e-01 100.0% 69.3%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.55 48.0 3.58e-01 100.0% 52.9%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 3.99e-01 100.0% 82.0%
3oblA00 2.40.128.450 Mainly Beta › Beta Barrel › Lipocalin › 0.54 44.0 3.63e-01 95.5% 100.0%
1z6bA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 43.0 3.41e-01 92.4% 96.5%
3v8uA04 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.52 44.0 3.56e-01 100.0% 93.6%
2lfuA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.52 44.0 3.65e-01 100.0% 84.5%
3g3oA00 3.20.100.30 Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain 0.52 45.0 3.00e-01 100.0% 40.6%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.51 39.0 3.76e-01 87.9% 71.6%
2lmeA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.51 34.0 3.02e-01 84.8% 44.8%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 41.0 2.84e-01 95.5% 98.9%
4r9iA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 38.0 3.43e-01 84.8% 83.0%
4ckmB00 2.170.210.20 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain 0.50 41.0 3.28e-01 93.9% 80.6%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3928430 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.83 66.0 6.53e-01 98.5% 80.0%
3926118 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.82 64.0 6.68e-01 97.0% 91.7%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.80 65.0 5.10e-01 100.0% 43.0%
3368864 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.80 65.0 6.60e-01 100.0% 89.2%
3448975 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.78 64.0 6.53e-01 100.0% 90.8%
3301015 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 64.0 6.50e-01 100.0% 90.8%
3615365 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.77 70.0 4.74e-01 100.0% 35.2%
4163661 4.1.1.446 ↗ beta barrels › SH3 › SH3 › SH3 › PF30222 0.77 63.0 6.29e-01 100.0% 86.8%
4027263 4.1.1.104 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.74 59.0 4.81e-01 100.0% 47.5%
3395150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 55.0 5.74e-01 100.0% 90.0%
3723175 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.72 63.0 5.71e-01 100.0% 71.1%
3315510 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.72 65.0 5.46e-01 100.0% 79.1%
3363751 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.72 65.0 5.55e-01 100.0% 82.9%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 59.0 6.05e-01 100.0% 92.2%
3341617 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.71 64.0 4.28e-01 100.0% 32.0%
3354076 4.1.1.330 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.70 62.0 5.01e-01 100.0% 53.8%
5042986 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 54.0 5.60e-01 100.0% 91.7%
3843359 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.70 64.0 5.83e-01 100.0% 77.6%
3394559 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 62.0 5.31e-01 100.0% 80.0%
3491785 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.69 62.0 5.15e-01 100.0% 69.6%
165654 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.69 58.0 5.59e-01 100.0% 82.4%
3609256 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 59.0 5.43e-01 100.0% 72.9%
3339162 4.1.1.330 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.68 61.0 4.85e-01 100.0% 52.3%
4614716 4.1.1.292 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.67 59.0 5.83e-01 97.0% 100.0%
3487837 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 61.0 4.26e-01 100.0% 66.5%
3678872 4.1.1.239 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.66 59.0 5.69e-01 100.0% 94.7%
3721062 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.66 58.0 5.34e-01 98.5% 80.0%
4882197 219.1.1.28 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP 0.66 58.0 4.77e-01 100.0% 55.1%
3207081 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.65 56.0 5.69e-01 95.5% 98.5%
3392590 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 52.0 5.46e-01 87.9% 100.0%
3274701 4.1.1.239 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.64 51.0 5.37e-01 100.0% 95.0%
4032514 1.1.5.16 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › MreC 0.64 52.0 3.63e-01 87.9% 40.5%
3931715 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 55.0 4.82e-01 97.0% 100.0%
3796536 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.63 49.0 4.69e-01 89.4% 71.2%
4126278 1.1.5.16 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › MreC 0.63 50.0 3.44e-01 87.9% 36.6%
4971928 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.62 46.0 3.01e-01 78.8% 85.4%
3788228 220.1.1.4 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.61 52.0 4.22e-01 100.0% 71.1%
3991019 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.61 44.0 4.46e-01 83.3% 78.5%
3216019 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 53.0 5.35e-01 100.0% 100.0%
4011774 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.60 51.0 3.60e-01 95.5% 56.7%
3629844 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.60 47.0 4.69e-01 86.4% 88.6%
3960836 267.1.1.0 ↗ a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.60 40.0 2.98e-01 71.2% 50.8%
3773064 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.60 50.0 2.96e-01 98.5% 40.0%
3836393 9.2.1.2 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Vac_ImportDeg 0.60 52.0 3.76e-01 100.0% 85.3%
3618804 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.57 45.0 4.18e-01 87.9% 71.8%
3936347 868.1.1.3 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.57 49.0 3.58e-01 100.0% 36.8%
4332725 295.1.1.2 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA 0.57 49.0 3.96e-01 98.5% 75.4%
412674 9.1.1.3 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › His_binding 0.57 49.0 3.87e-01 100.0% 63.2%
3235213 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 49.0 3.99e-01 100.0% 82.3%
3580039 708.1.1.16 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC 0.56 49.0 3.75e-01 100.0% 49.4%
3400912 868.1.1.3 ↗ a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 0.55 48.0 3.34e-01 100.0% 29.5%
185116 295.1.1.2 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › SsgA 0.55 48.0 3.82e-01 100.0% 73.0%
3795297 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 3.82e-01 93.9% 57.9%
3264731 216.1.1.4 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.54 41.0 3.41e-01 84.8% 48.5%
3974649 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.54 42.0 3.86e-01 87.9% 87.8%
5043037 5090.1.1.0 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.53 48.0 4.16e-01 100.0% 90.0%
5019700 5090.1.1.6 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S-layer 0.53 46.0 4.03e-01 97.0% 78.0%
1841031 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.52 40.0 3.71e-01 87.9% 67.7%
4849080 5084.1.1.44 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HphA_C 0.52 44.0 4.18e-01 97.0% 90.0%
3642325 9.1.1.29 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › BFA1_C 0.52 44.0 3.46e-01 100.0% 85.6%
3739384 4075.1.1.2 ↗ a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 0.51 41.0 3.74e-01 98.5% 97.0%
3890276 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.50 39.0 3.75e-01 97.0% 71.2%