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KM236245.1__AIW03245.1__CPT_Mater88__00088
Bact-VirKM236245.1__AIW03245.1__CPT_Mater88__00088
Identity
- Accession:
- KM236245 ↗
- Kingdom:
- phage
Quality
72.4
mean pLDDT
Taxonomy
TaxID: 1540090
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-37
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jhjA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.67 | 52.0 | 3.80e-01 | 97.2% | 42.5% |
| 3tndB01 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.60 | 40.0 | 3.90e-01 | 94.4% | 48.8% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 38.0 | 2.75e-01 | 80.6% | 18.9% |
| 3qthB00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.58 | 39.0 | 2.68e-01 | 75.0% | 22.6% |
| 2ayaA00 | 3.30.300.150 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DNA polymerase III, tau subunit, domain V | 0.56 | 38.0 | 2.79e-01 | 72.2% | 45.3% |
| 2fclA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.56 | 47.0 | 3.10e-01 | 100.0% | 25.0% |
| 7ob9B02 | 3.90.1800.10 | Alpha Beta › Alpha-Beta Complex › DCoH-like › RNA polymerase alpha subunit dimerisation domain | 0.56 | 38.0 | 2.91e-01 | 100.0% | 26.5% |
| 3gkmA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 44.0 | 3.07e-01 | 100.0% | 78.3% |
| 1u6gC00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 39.0 | 2.07e-01 | 77.8% | 5.1% |
| 2zxiA03 | 1.10.10.1800 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA | 0.55 | 37.0 | 2.79e-01 | 86.1% | 24.7% |
| 3qdrB00 | 2.30.30.970 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 38.0 | 3.60e-01 | 100.0% | 59.2% |
| 4dg8A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.54 | 40.0 | 2.39e-01 | 100.0% | 55.1% |
| 2b3yA03 | 3.30.499.10 | Alpha Beta › 2-Layer Sandwich › Aconitase; domain 3 › Aconitase, domain 3 | 0.53 | 40.0 | 2.63e-01 | 100.0% | 79.9% |
| 1xviA02 | 3.30.980.20 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 | 0.53 | 43.0 | 3.24e-01 | 94.4% | 100.0% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.53 | 41.0 | 3.75e-01 | 100.0% | 61.8% |
| 7x0fA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.53 | 36.0 | 2.67e-01 | 88.9% | 88.5% |
| 2a07J00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 40.0 | 3.24e-01 | 97.2% | 84.3% |
| 3mnfA00 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.51 | 36.0 | 2.33e-01 | 91.7% | 13.2% |
| 1u0mA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 39.0 | 2.62e-01 | 86.1% | 43.8% |
| 4ijaA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 40.0 | 2.71e-01 | 88.9% | 29.3% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3566304 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.65 | 44.0 | 4.32e-01 | 88.9% | 65.0% |
| 3257636 | 610.2.1.0 ↗ | alpha arrays › ERP29 C domain-like › Helical domain of Sec23/24 › Helical domain of Sec23/24 | 0.63 | 46.0 | 3.29e-01 | 75.0% | 44.3% |
| 3272367 | 2004.5.1.3 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN | 0.63 | 43.0 | 2.66e-01 | 72.2% | 10.6% |
| 3762475 | 3860.1.1.131 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › Myosin_head | 0.62 | 48.0 | 2.68e-01 | 91.7% | 8.8% |
| 4249478 | 2003.1.5.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CheR | 0.62 | 50.0 | 3.20e-01 | 100.0% | 55.3% |
| None | — | 0.62 | 49.0 | 2.68e-01 | 97.2% | 6.9% | |
| 3699603 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 48.0 | 2.60e-01 | 94.4% | 7.0% |
| 3479755 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 47.0 | 2.68e-01 | 94.4% | 10.6% |
| 5005537 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.60 | 40.0 | 3.65e-01 | 100.0% | 45.5% |
| 3911250 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.60 | 45.0 | 2.53e-01 | 94.4% | 8.1% |
| 3470049 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.59 | 46.0 | 2.53e-01 | 94.4% | 7.1% |
| 1447875 | 2004.1.1.181 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_7 | 0.59 | 47.0 | 3.05e-01 | 97.2% | 25.7% |
| None | — | 0.58 | 44.0 | 2.39e-01 | 94.4% | 6.0% | |
| 3933800 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 44.0 | 2.62e-01 | 86.1% | 12.1% |
| 3566641 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 45.0 | 2.43e-01 | 94.4% | 6.5% |
| 4567313 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.57 | 42.0 | 2.33e-01 | 94.4% | 7.9% |
| 3262982 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 41.0 | 3.98e-01 | 88.9% | 73.3% |
| 4974473 | 316.1.1.85 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_5 | 0.56 | 44.0 | 2.77e-01 | 100.0% | 37.6% |
| 3781291 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 36.0 | 2.70e-01 | 80.6% | 23.0% |
| 3214830 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 40.0 | 3.27e-01 | 100.0% | 45.3% |
| 3244423 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 40.0 | 3.24e-01 | 100.0% | 48.4% |
| 3302473 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.54 | 41.0 | 2.56e-01 | 97.2% | 31.3% |
| 4004443 | 4953.2.1.3 ↗ | beta barrels › L-aspartase C-terminal domain-like › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain › Lid-like insertion of Propionyl-CoA synthase (PCS) ligase domain › NA37 | 0.52 | 37.0 | 2.79e-01 | 83.3% | 70.9% |
| 4056990 | 101.1.2.501 ↗ | alpha arrays › HTH › HTH › winged helix domain › NA37 | 0.52 | 36.0 | 2.77e-01 | 83.3% | 70.9% |
| 3224830 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 38.0 | 2.29e-01 | 100.0% | 25.4% |
| 3163818 | 6045.1.1.1 ↗ | a+b complex topology › C-terminal domain of BipA › C-terminal domain of BipA › C-terminal domain of BipA › BipA_C | 0.52 | 42.0 | 3.01e-01 | 100.0% | 49.6% |
| 4027239 | 6045.1.1.1 ↗ | a+b complex topology › C-terminal domain of BipA › C-terminal domain of BipA › C-terminal domain of BipA › BipA_C | 0.52 | 43.0 | 3.04e-01 | 100.0% | 49.2% |
| 3717050 | 5.1.4.267 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF28639 | 0.51 | 41.0 | 2.31e-01 | 97.2% | 14.1% |
| 3778657 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 38.0 | 2.09e-01 | 97.2% | 13.0% |
| 1681827 | 10.27.1.0 ↗ | beta sandwiches › jelly-roll › Polyhedrin › Polyhedrin | 0.50 | 38.0 | 2.45e-01 | 100.0% | 48.8% |