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KM236247.1__AIW03658.1__CPT_Pascal23__00023

Bact-Vir

KM236247.1__AIW03658.1__CPT_Pascal23__00023

Identity

Accession:
KM236247 ↗
Kingdom:
phage

Quality

87.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pagevirus› Bacillus_phage_Pascal

TaxID: 1540092

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-104
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hu3A00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.69 49.0 3.90e-01 73.8% 60.8%
5nnpE01 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.63 47.0 3.05e-01 79.6% 25.2%
4nrhB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 44.0 3.72e-01 72.8% 88.8%
7yb9A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 46.0 3.65e-01 78.6% 53.2%
3gw4A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 43.0 3.53e-01 74.8% 49.0%
5fzsA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 43.0 4.25e-01 75.7% 72.9%
6fdpA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 41.0 3.93e-01 71.8% 80.8%
4by6D02 1.25.40.800 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 46.0 3.69e-01 87.4% 89.3%
4eadA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.58 40.0 4.02e-01 71.8% 97.2%
4yonA01 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.58 40.0 3.20e-01 71.8% 79.6%
1x5bA01 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 42.0 3.84e-01 75.7% 88.9%
6hftA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 41.0 3.86e-01 76.7% 74.8%
7csoA01 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.54 38.0 3.08e-01 74.8% 78.2%
4abxA02 6.10.140.1090 Special › Helix non-globular › Helix Hairpins › 0.52 25.0 2.76e-01 71.8% 50.6%
4a8eA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.51 36.0 3.91e-01 76.7% 87.4%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030561 109.1.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.67 49.0 4.16e-01 77.7% 71.4%
3348687 109.4.1.1156 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif 0.65 45.0 4.16e-01 70.9% 60.0%
3817843 109.4.1.1258 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.64 49.0 3.17e-01 81.6% 32.6%
3695827 109.2.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_15 0.62 48.0 3.21e-01 82.5% 54.6%
3743213 109.2.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_15 0.62 46.0 3.17e-01 80.6% 55.9%
5017744 109.4.1.202 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.62 46.0 3.18e-01 77.7% 33.9%
3598147 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 45.0 3.24e-01 77.7% 68.9%
3333118 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.61 51.0 3.73e-01 92.2% 46.0%
3346499 109.4.1.46 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N 0.61 46.0 4.24e-01 80.6% 97.0%
5059070 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 43.0 3.88e-01 77.7% 74.0%
None — 0.57 43.0 4.12e-01 80.6% 94.2%
3684002 109.4.1.202 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.56 44.0 3.95e-01 87.4% 78.7%
3329259 109.4.1.1296 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long, TPR_24 0.55 44.0 2.81e-01 86.4% 30.7%
3289266 4995.1.1.0 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like 0.55 39.0 4.27e-01 75.7% 97.6%
3999624 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.54 38.0 3.24e-01 73.8% 69.7%
4584259 532.2.1.1 ↗ alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › HrpJ 0.54 41.0 4.09e-01 79.6% 84.8%
3251542 109.4.1.2301 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_6, TPR_16, TPR_19 0.54 38.0 4.00e-01 74.8% 83.2%
3297457 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 41.0 3.66e-01 84.5% 74.4%
3510771 610.4.1.0 ↗ alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain 0.52 38.0 3.85e-01 74.8% 85.0%
3644382 109.4.1.1437 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3, TPR_8 0.52 42.0 3.61e-01 89.3% 81.2%
3679306 2004.1.1.474 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynamin_N, MMR_HSR1 0.50 35.0 2.32e-01 72.8% 34.8%