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KM272873.1__AIM19606.1__X__00001
Bact-VirKM272873.1__AIM19606.1__X__00001
Identity
- Accession:
- KM272873 ↗
- Kingdom:
- phage
Quality
78.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-195
Domain cluster:
rep: MZ047271.2__UWJ04558.1__KJILBIEH_00059__00059__D244-432
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bp6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 24.0 | 3.50e-01 | 94.3% | 68.2% |
| 4ofqA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 38.0 | 4.18e-01 | 94.3% | 70.3% |
| 1tg7A04 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 29.0 | 3.17e-01 | 88.7% | 47.6% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 27.0 | 3.66e-01 | 100.0% | 74.0% |
| 3fn9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 28.0 | 3.54e-01 | 92.3% | 66.7% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 24.0 | 3.22e-01 | 95.4% | 61.5% |
| 4q9bA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 28.0 | 3.75e-01 | 100.0% | 78.2% |
| 5wl1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 27.0 | 3.60e-01 | 100.0% | 74.3% |
| 2qsvA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 29.0 | 3.65e-01 | 100.0% | 72.3% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.62 | 37.0 | 4.52e-01 | 100.0% | 93.3% |
| 8begA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 36.0 | 3.99e-01 | 94.8% | 70.6% |
| 2pn5A02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.59 | 27.0 | 3.53e-01 | 100.0% | 77.2% |
| 1l9mA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 27.0 | 3.64e-01 | 100.0% | 82.5% |
| 4ofqB01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 38.0 | 3.97e-01 | 94.8% | 69.4% |
| 1v8hA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 28.0 | 3.66e-01 | 100.0% | 80.2% |
| 4i0kA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 26.0 | 3.52e-01 | 100.0% | 80.0% |
| 1loxA02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.58 | 34.0 | 4.26e-01 | 100.0% | 97.3% |
| 4u33A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 26.0 | 3.32e-01 | 94.8% | 70.3% |
| 4bhuA00 | 2.60.40.3490 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 32.0 | 3.78e-01 | 100.0% | 79.7% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 19.0 | 3.27e-01 | 86.1% | 95.1% |
| 3w5nA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 37.0 | 4.01e-01 | 100.0% | 80.2% |
| 2kl6A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 26.0 | 3.28e-01 | 100.0% | 75.0% |
| 2q3zA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 27.0 | 3.67e-01 | 100.0% | 93.8% |
| 1wzlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 29.0 | 3.57e-01 | 100.0% | 81.0% |
| 1ex0A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 27.0 | 3.61e-01 | 100.0% | 92.6% |
| 4cvuA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 24.0 | 3.01e-01 | 96.4% | 64.7% |
| 1wk0A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 24.0 | 2.93e-01 | 96.4% | 64.7% |
| 1g0dA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 26.0 | 3.54e-01 | 100.0% | 93.8% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.51 | 23.0 | 3.04e-01 | 97.9% | 76.7% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 32.0 | 3.68e-01 | 86.1% | 84.9% |
| 4aq1A01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 25.0 | 3.30e-01 | 88.7% | 90.4% |
| 1m2vB02 | 2.60.40.1670 | Mainly Beta › Sandwich › Immunoglobulin-like › beta-sandwich domain of Sec23/24 | 0.50 | 31.0 | 3.35e-01 | 100.0% | 72.0% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969660 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 26.0 | 3.72e-01 | 89.7% | 67.4% |
| 4992528 | 11.1.1.1403 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1616 | 0.70 | 28.0 | 3.42e-01 | 93.3% | 56.0% |
| 4968182 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 27.0 | 3.64e-01 | 91.8% | 64.8% |
| 3255188 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.69 | 43.0 | 4.90e-01 | 93.3% | 82.8% |
| 4969298 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 30.0 | 3.89e-01 | 94.8% | 68.7% |
| 5068877 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 29.0 | 3.70e-01 | 94.3% | 66.1% |
| 5071370 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 28.0 | 3.89e-01 | 100.0% | 75.0% |
| 4943024 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.67 | 28.0 | 3.58e-01 | 91.2% | 63.5% |
| 3525316 | 11.1.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C | 0.67 | 26.0 | 3.48e-01 | 94.8% | 65.0% |
| 4942069 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 29.0 | 3.82e-01 | 92.3% | 70.9% |
| 3703774 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 29.0 | 3.74e-01 | 93.8% | 67.8% |
| 4641771 | 10.37.1.1 ↗ | beta sandwiches › jelly-roll › TerD › TerD › TerD | 0.66 | 44.0 | 5.28e-01 | 100.0% | 97.8% |
| 5080265 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.64 | 28.0 | 3.49e-01 | 90.7% | 63.3% |
| 4927194 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 29.0 | 3.67e-01 | 91.8% | 70.0% |
| 5067977 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.64 | 27.0 | 3.48e-01 | 90.2% | 65.5% |
| 5060619 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.64 | 28.0 | 3.65e-01 | 91.2% | 70.0% |
| 4981983 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 26.0 | 3.38e-01 | 92.8% | 63.6% |
| 4938060 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 26.0 | 3.48e-01 | 92.3% | 67.6% |
| 5059387 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 26.0 | 3.47e-01 | 92.8% | 68.6% |
| 5062783 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 27.0 | 3.56e-01 | 92.8% | 70.5% |
| 5083247 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 28.0 | 3.71e-01 | 100.0% | 75.0% |
| 3858619 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.63 | 27.0 | 3.54e-01 | 100.0% | 70.5% |
| 4954877 | 11.1.1.531 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 | 0.63 | 31.0 | 4.02e-01 | 100.0% | 81.8% |
| 3866741 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 25.0 | 3.41e-01 | 96.4% | 69.0% |
| 5035550 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 26.0 | 3.56e-01 | 100.0% | 74.0% |
| 5019539 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.61 | 26.0 | 3.38e-01 | 94.3% | 66.4% |
| 5060774 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.61 | 27.0 | 3.50e-01 | 92.8% | 69.6% |
| 5062130 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.61 | 28.0 | 3.50e-01 | 92.8% | 67.5% |
| 4929252 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 29.0 | 3.65e-01 | 100.0% | 73.3% |
| 5069372 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.60 | 28.0 | 3.43e-01 | 92.8% | 67.8% |
| 4147991 | 11.1.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C | 0.59 | 26.0 | 3.57e-01 | 100.0% | 79.8% |
| 3414201 | 11.1.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C | 0.59 | 27.0 | 3.55e-01 | 100.0% | 79.0% |
| 5036667 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 29.0 | 3.81e-01 | 100.0% | 84.8% |
| 3919201 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.58 | 26.0 | 3.54e-01 | 100.0% | 80.0% |
| 3187961 | 11.1.5.105 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7077 | 0.57 | 34.0 | 4.14e-01 | 100.0% | 91.2% |
| 4014751 | 11.1.1.962 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7077 | 0.56 | 33.0 | 4.02e-01 | 100.0% | 91.7% |
| 3203718 | 11.1.5.105 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF7077 | 0.56 | 33.0 | 3.96e-01 | 100.0% | 88.8% |
| 3915765 | 11.1.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C | 0.55 | 27.0 | 3.63e-01 | 100.0% | 89.9% |
| 3635518 | 11.1.1.962 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7077 | 0.55 | 33.0 | 3.98e-01 | 100.0% | 93.3% |
| 3569425 | 11.1.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C | 0.54 | 26.0 | 3.58e-01 | 100.0% | 92.6% |
| 5059481 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 31.0 | 3.62e-01 | 87.6% | 81.5% |
| 3518442 | 10.10.1.1 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT | 0.53 | 34.0 | 4.03e-01 | 100.0% | 96.2% |
| 5056416 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 29.0 | 3.31e-01 | 77.3% | 70.7% |
| 4981932 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 26.0 | 3.51e-01 | 100.0% | 93.0% |
| 5070509 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 26.0 | 3.17e-01 | 100.0% | 74.2% |
D2
high
residues 205-272
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hshE00 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.74 | 50.0 | 5.54e-01 | 75.0% | 87.3% |
| 1yu0A01 | 2.10.10.30 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.68 | 44.0 | 4.92e-01 | 86.8% | 88.2% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 36.0 | 4.18e-01 | 88.2% | 83.0% |
| 2x5kP02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.60 | 44.0 | 3.34e-01 | 77.9% | 37.6% |
| 3ednA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.60 | 47.0 | 3.84e-01 | 86.8% | 70.9% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.60 | 48.0 | 3.90e-01 | 88.2% | 68.9% |
| 1cseI00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.58 | 41.0 | 4.23e-01 | 76.5% | 85.7% |
| 2xp1A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.57 | 48.0 | 4.39e-01 | 97.1% | 70.5% |
| 3bxwA03 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.57 | 29.0 | 3.25e-01 | 75.0% | 60.0% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 41.0 | 3.89e-01 | 85.3% | 64.6% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 37.0 | 3.99e-01 | 83.8% | 79.7% |
| 3d36B01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.56 | 48.0 | 3.62e-01 | 94.1% | 85.6% |
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 47.0 | 3.97e-01 | 94.1% | 74.6% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 39.0 | 3.65e-01 | 76.5% | 76.7% |
| 6e5bN00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.54 | 44.0 | 3.28e-01 | 95.6% | 57.3% |
| 2hjsA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.54 | 37.0 | 2.85e-01 | 75.0% | 31.0% |
| 2uzzA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.53 | 44.0 | 3.21e-01 | 91.2% | 86.4% |
| 2pvzB01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.53 | 41.0 | 3.05e-01 | 88.2% | 82.0% |
| 7q04F01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.52 | 39.0 | 3.36e-01 | 80.9% | 83.5% |
| 3cz8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.51 | 28.0 | 3.09e-01 | 82.4% | 63.2% |
| 2arhA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 43.0 | 3.37e-01 | 98.5% | 96.2% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.50 | 34.0 | 3.60e-01 | 76.5% | 79.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3395491 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.68 | 58.0 | 4.35e-01 | 95.6% | 92.4% |
| 3749834 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.68 | 42.0 | 4.58e-01 | 98.5% | 76.4% |
| 3420356 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.62 | 46.0 | 3.73e-01 | 77.9% | 96.2% |
| 3622645 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.59 | 41.0 | 3.76e-01 | 75.0% | 76.8% |
| 682 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.58 | 40.0 | 3.68e-01 | 75.0% | 76.8% |
| 1177793 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.55 | 45.0 | 3.62e-01 | 95.6% | 49.7% |
| 5022848 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 33.0 | 3.48e-01 | 83.8% | 70.0% |
| 5037842 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.53 | 41.0 | 2.89e-01 | 92.6% | 70.5% |
| 3378005 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.52 | 44.0 | 2.90e-01 | 95.6% | 26.9% |
| 3273272 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 38.0 | 2.44e-01 | 85.3% | 22.3% |
| 3937472 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.50 | 42.0 | 3.70e-01 | 95.6% | 82.9% |
D3
high
residues 277-397
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.60 | 43.0 | 4.14e-01 | 100.0% | 64.7% |
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 36.0 | 4.09e-01 | 99.2% | 83.1% |
| 1eq6A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.58 | 43.0 | 3.71e-01 | 100.0% | 49.7% |
| 2e4tA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 35.0 | 3.58e-01 | 97.5% | 61.2% |
| 4madA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 34.0 | 3.31e-01 | 100.0% | 51.5% |
| 2vrqA01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 39.0 | 3.81e-01 | 99.2% | 65.9% |
| 3rn5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 29.0 | 3.32e-01 | 100.0% | 66.3% |
| 3mwxA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 48.0 | 3.59e-01 | 100.0% | 51.9% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.53 | 31.0 | 3.03e-01 | 85.1% | 50.4% |
| 3w7tA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.52 | 48.0 | 3.86e-01 | 100.0% | 84.1% |
| 1ygaA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 46.0 | 3.39e-01 | 99.2% | 90.8% |
| 3nreA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 46.0 | 3.55e-01 | 100.0% | 56.0% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.52 | 31.0 | 3.22e-01 | 100.0% | 62.8% |
| 1i5pA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 36.0 | 3.34e-01 | 100.0% | 55.7% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3191189 | 325.1.7.38 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › PS_Dcarbxylase | 0.66 | 48.0 | 4.27e-01 | 100.0% | 53.2% |
| 4020665 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.64 | 48.0 | 4.12e-01 | 100.0% | 49.7% |
| 3723133 | 325.1.6.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase | 0.61 | 49.0 | 4.05e-01 | 100.0% | 48.4% |
| 3955498 | 12.3.1.28 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_92N | 0.60 | 55.0 | 4.41e-01 | 100.0% | 86.4% |
| 2717340 | 881.1.1.4 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DcrB | 0.57 | 39.0 | 3.68e-01 | 100.0% | 57.3% |
| 149522 | 2.1.1.22 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN | 0.55 | 29.0 | 3.16e-01 | 100.0% | 58.7% |
| 3840290 | 2.1.1.22 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN | 0.53 | 30.0 | 3.32e-01 | 100.0% | 67.7% |
| 3411174 | 10.30.1.0 ↗ | beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain | 0.52 | 31.0 | 3.87e-01 | 100.0% | 98.6% |
| 140642 | 12.3.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim | 0.52 | 46.0 | 3.55e-01 | 100.0% | 56.0% |