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KM359505.1__AIR93422.1__X__00052
Bact-VirKM359505.1__AIR93422.1__X__00052
Identity
- Accession:
- KM359505 ↗
- Kingdom:
- phage
Quality
92.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Haifavirus›
Prochlorococcus_phage_P-TIM68
TaxID: 1542477
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-138
Domain cluster:
rep: BML_coassembly_scaffold_234_prodigal-single.1__X__X__00197__D302-449
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19782.5 best | DUF6267 | 147.1 | 1.30e-42 | 100.0% | 38.8% |
D2
high
residues 140-216_230-261
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF19782.5 best | DUF6267 | 33.2 | 5.30e-08 | 58.7% | 13.6% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a1yA00 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 34.0 | 4.47e-01 | 71.6% | 94.8% |
| 1bw5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 36.0 | 4.33e-01 | 86.2% | 95.5% |
| 1tisA00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.58 | 43.0 | 3.21e-01 | 78.0% | 79.4% |
| 2gloA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 27.0 | 3.48e-01 | 70.6% | 81.4% |
| 4behA01 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.55 | 30.0 | 3.68e-01 | 75.2% | 87.5% |
| 2ip2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 32.0 | 3.60e-01 | 72.5% | 73.8% |
| 1j2nA00 | 1.10.150.220 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › CPI-17 | 0.54 | 32.0 | 3.33e-01 | 82.6% | 62.6% |
| 5tgtA02 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 37.0 | 3.60e-01 | 79.8% | 64.2% |
| 2jscB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 33.0 | 3.79e-01 | 78.0% | 86.3% |
| 2xzn800 | 3.30.63.20 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › | 0.53 | 35.0 | 3.73e-01 | 84.4% | 78.5% |
| 1lfuP00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.52 | 35.0 | 3.88e-01 | 79.8% | 91.5% |
| 5wzoA00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.51 | 35.0 | 3.44e-01 | 76.1% | 63.4% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4331721 | 101.1.1.225 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF6262 | 0.62 | 33.0 | 4.06e-01 | 72.5% | 81.4% |
| 4954772 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.61 | 31.0 | 4.00e-01 | 71.6% | 92.7% |
| 4023609 | 101.1.1.28 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SWIRM | 0.61 | 41.0 | 4.33e-01 | 90.8% | 78.9% |
| 3436562 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 39.0 | 4.53e-01 | 71.6% | 94.7% |
| 3702175 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.59 | 33.0 | 3.62e-01 | 73.4% | 67.1% |
| 3985600 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.59 | 32.0 | 3.77e-01 | 78.9% | 78.3% |
| 5031872 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 32.0 | 4.07e-01 | 76.1% | 96.7% |
| 3214720 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 29.0 | 3.09e-01 | 73.4% | 58.9% |
| 3954177 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.54 | 32.0 | 4.04e-01 | 77.1% | 100.0% |
| 5015200 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 40.0 | 2.92e-01 | 79.8% | 43.4% |
| 5041451 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.53 | 35.0 | 3.61e-01 | 78.0% | 72.0% |
| 3733163 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.52 | 42.0 | 2.83e-01 | 88.1% | 47.7% |
| 3338016 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.50 | 29.0 | 2.99e-01 | 75.2% | 58.0% |
| 4600908 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 39.0 | 2.54e-01 | 86.2% | 46.5% |