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KM359505.1__AIR93466.1__X__00128
Bact-VirKM359505.1__AIR93466.1__X__00128
Identity
- Accession:
- KM359505 ↗
- Kingdom:
- phage
Quality
80.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Haifavirus›
Prochlorococcus_phage_P-TIM68
TaxID: 1542477
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 105-121_134-183
Domain cluster:
rep: MT647606.1__QOI69138.1__Mosig_00177__00174__D27-85
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11753.14 best | DUF3310 | 35.6 | 1.10e-08 | 77.6% | 78.3% |
D2
medium
residues 22-89
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o0bA02 | 3.65.10.10 | Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain | 0.52 | 39.0 | 2.84e-01 | 83.8% | 57.2% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.53e-01 | 80.9% | 75.3% |
| 2xigA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.41e-01 | 79.4% | 69.2% |
| 5jbrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 36.0 | 3.44e-01 | 79.4% | 67.4% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4942703 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 49.0 | 4.00e-01 | 100.0% | 98.6% |
| 3484263 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.53 | 40.0 | 2.92e-01 | 83.8% | 66.2% |
| 4032267 | 2.1.1.221 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF6414 | 0.52 | 35.0 | 3.08e-01 | 70.6% | 77.3% |
| 3407169 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.51 | 37.0 | 3.26e-01 | 77.9% | 77.1% |
| 3574282 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.51 | 39.0 | 3.39e-01 | 85.3% | 79.1% |
| 4954707 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.51 | 37.0 | 3.43e-01 | 82.4% | 74.7% |
| 3594005 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 38.0 | 2.98e-01 | 83.8% | 44.2% |
| 5056293 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.51 | 40.0 | 2.85e-01 | 88.2% | 85.8% |
| 3500153 | 219.1.1.27 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Menin | 0.50 | 34.0 | 2.57e-01 | 72.1% | 68.8% |
| 3414142 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.50 | 43.0 | 3.31e-01 | 98.5% | 67.9% |
| 3260309 | 101.1.2.29 ↗ | alpha arrays › HTH › HTH › winged helix domain › PTS_2-RNA | 0.50 | 34.0 | 3.14e-01 | 72.1% | 81.1% |
| 146375 | 243.1.1.27 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4348 | 0.50 | 34.0 | 2.86e-01 | 75.0% | 40.3% |