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KM359505.1__AIR93565.1__X__00227
Bact-VirKM359505.1__AIR93565.1__X__00227
Identity
- Accession:
- KM359505 ↗
- Kingdom:
- phage
Quality
88.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Haifavirus›
Prochlorococcus_phage_P-TIM68
TaxID: 1542477
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-66
Domain cluster:
rep: MT670419.1__QNO00340.1__phiPsa315_106__00106__D4-67
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02427.24 best | PSI_PsaE | 89.1 | 1.70e-25 | 100.0% | 90.0% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jb0E00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.93 | 88.0 | 8.46e-01 | 100.0% | 91.3% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 64.0 | 6.73e-01 | 100.0% | 86.0% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 59.0 | 6.42e-01 | 100.0% | 88.2% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.78 | 56.0 | 6.31e-01 | 96.8% | 100.0% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 55.0 | 5.49e-01 | 100.0% | 73.0% |
| 4ld6A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 60.0 | 4.75e-01 | 100.0% | 47.0% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 56.0 | 5.62e-01 | 100.0% | 83.9% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.64 | 55.0 | 4.48e-01 | 100.0% | 52.3% |
| 1i1jB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 57.0 | 4.78e-01 | 100.0% | 62.5% |
| 1ixdA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.63 | 56.0 | 4.73e-01 | 100.0% | 66.3% |
| 4z88A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 54.0 | 5.41e-01 | 100.0% | 96.9% |
| 2egeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 52.0 | 4.96e-01 | 100.0% | 82.7% |
| 3qdfA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.59 | 48.0 | 4.97e-01 | 100.0% | 96.6% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 47.0 | 4.07e-01 | 100.0% | 57.1% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 47.0 | 3.61e-01 | 93.5% | 86.6% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.56 | 47.0 | 3.78e-01 | 93.5% | 73.0% |
| 1d1nA00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 42.0 | 3.55e-01 | 80.6% | 85.9% |
| 2fb7A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 47.0 | 4.39e-01 | 100.0% | 85.0% |
| 2hdlA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 41.0 | 3.93e-01 | 90.3% | 76.6% |
| 2r0lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 45.0 | 3.74e-01 | 100.0% | 85.8% |
| 1m9uA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 45.0 | 3.74e-01 | 100.0% | 88.1% |
| 4b08A01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 38.0 | 3.50e-01 | 82.3% | 93.8% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.50 | 35.0 | 3.80e-01 | 91.9% | 92.2% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4878500 | 5077.1.1.5 ↗ | extended segments › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein › Chlorophyll a-b binding protein › PSI_PsaE | 0.97 | 68.0 | 7.55e-01 | 83.9% | 88.2% |
| 4874232 | 4.1.1.29 ↗ | beta barrels › SH3 › SH3 › SH3 › PSI_PsaE | 0.93 | 89.0 | 8.52e-01 | 100.0% | 89.9% |
| 4964768 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.87 | 68.0 | 6.95e-01 | 100.0% | 85.0% |
| 4027263 | 4.1.1.104 ↗ | beta barrels › SH3 › SH3 › SH3 › KN17_SH3 | 0.85 | 65.0 | 5.12e-01 | 100.0% | 41.7% |
| 959119 | 4.1.1.75 ↗ | beta barrels › SH3 › SH3 › SH3 › NdhS | 0.84 | 64.0 | 6.80e-01 | 100.0% | 90.7% |
| 3585492 | 4.1.1.103 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12 | 0.75 | 70.0 | 5.64e-01 | 100.0% | 57.3% |
| 3799904 | 4.1.1.315 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 | 0.75 | 70.0 | 4.15e-01 | 100.0% | 15.7% |
| 3344796 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.75 | 59.0 | 5.29e-01 | 100.0% | 62.7% |
| 3486325 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 69.0 | 5.35e-01 | 100.0% | 83.2% |
| 3495880 | 4.1.1.315 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 | 0.74 | 68.0 | 4.03e-01 | 100.0% | 15.3% |
| 5031165 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.74 | 58.0 | 5.59e-01 | 100.0% | 74.3% |
| 3349135 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 65.0 | 5.73e-01 | 100.0% | 66.7% |
| 3677709 | 4.1.1.103 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12 | 0.74 | 67.0 | 6.13e-01 | 100.0% | 88.7% |
| 3637508 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.73 | 56.0 | 5.53e-01 | 100.0% | 78.5% |
| 4616207 | 4.1.1.448 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5372 | 0.73 | 52.0 | 5.68e-01 | 96.8% | 96.0% |
| 3299937 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 65.0 | 5.73e-01 | 100.0% | 85.6% |
| 3908017 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.71 | 61.0 | 5.56e-01 | 100.0% | 72.5% |
| 3806777 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.70 | 61.0 | 5.77e-01 | 100.0% | 80.0% |
| 3669494 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.70 | 61.0 | 4.55e-01 | 100.0% | 39.3% |
| 3675120 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.70 | 63.0 | 5.67e-01 | 100.0% | 75.3% |
| 3710595 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 62.0 | 5.05e-01 | 100.0% | 54.5% |
| 3319789 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.67 | 59.0 | 5.29e-01 | 100.0% | 70.6% |
| 3761319 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.66 | 57.0 | 5.69e-01 | 100.0% | 90.8% |
| 3213653 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.66 | 58.0 | 5.40e-01 | 100.0% | 92.5% |
| 3342814 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.65 | 59.0 | 5.08e-01 | 100.0% | 75.8% |
| 3627576 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 58.0 | 5.76e-01 | 100.0% | 92.3% |
| 3793212 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 60.0 | 4.71e-01 | 100.0% | 66.7% |
| 3243710 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 58.0 | 5.63e-01 | 100.0% | 92.9% |
| 3812766 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.64 | 56.0 | 5.43e-01 | 100.0% | 85.7% |
| 3495904 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 55.0 | 5.44e-01 | 100.0% | 98.5% |
| 3925589 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 58.0 | 5.55e-01 | 100.0% | 88.6% |
| 3625263 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 58.0 | 4.87e-01 | 100.0% | 63.0% |
| 3807649 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.63 | 56.0 | 4.57e-01 | 100.0% | 69.6% |
| 3576940 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 58.0 | 3.84e-01 | 100.0% | 28.0% |
| 3476336 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.63 | 57.0 | 5.43e-01 | 100.0% | 87.1% |
| 3929341 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.61 | 52.0 | 4.82e-01 | 96.8% | 83.7% |
| 3184493 | 2.1.1.59 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1 | 0.61 | 49.0 | 3.81e-01 | 88.7% | 83.6% |
| 3594413 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.61 | 54.0 | 4.98e-01 | 100.0% | 77.5% |
| 3786412 | 4.1.1.344 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31193 | 0.61 | 53.0 | 4.87e-01 | 100.0% | 75.0% |
| 3675653 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.61 | 55.0 | 5.17e-01 | 100.0% | 82.7% |
| 3592075 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 53.0 | 4.80e-01 | 100.0% | 75.3% |
| 3827886 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.59 | 53.0 | 4.88e-01 | 100.0% | 81.2% |
| 4963635 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.58 | 42.0 | 4.06e-01 | 91.9% | 68.1% |
| 3721787 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 51.0 | 4.61e-01 | 100.0% | 75.3% |
| 4428246 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.57 | 40.0 | 2.39e-01 | 74.2% | 77.0% |
| 3436414 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.56 | 50.0 | 3.44e-01 | 100.0% | 53.8% |
| 3621358 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.55 | 40.0 | 3.99e-01 | 82.3% | 81.5% |
| 3220283 | 209.1.1.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like › Lectin_C | 0.54 | 46.0 | 3.57e-01 | 100.0% | 78.0% |
| 3833012 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.53 | 46.0 | 4.20e-01 | 100.0% | 75.3% |
| 3815585 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.53 | 40.0 | 2.65e-01 | 82.3% | 36.7% |
| 3263635 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 39.0 | 3.87e-01 | 85.5% | 84.6% |
| 3598298 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 36.0 | 3.71e-01 | 87.1% | 81.7% |
| 3736791 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 41.0 | 3.18e-01 | 95.2% | 85.2% |