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KM879221.2__AIU44271.1__RG2014_017__00017

Bact-Vir

KM879221.2__AIU44271.1__RG2014_017__00017

Identity

Accession:
KM879221 ↗
Kingdom:
phage

Quality

94.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-73
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6kjuB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.68 42.0 3.57e-01 91.7% 38.5%
3bwlB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.66 39.0 3.27e-01 90.3% 33.3%
1uzxA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.65 45.0 3.63e-01 100.0% 37.1%
3njaA02 2.10.70.100 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.64 39.0 4.71e-01 90.3% 95.7%
3luqB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.64 39.0 3.39e-01 90.3% 39.5%
2b02A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.63 40.0 3.56e-01 91.7% 43.3%
4hh3A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.63 36.0 3.17e-01 90.3% 35.1%
1bywA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.63 38.0 3.32e-01 88.9% 39.1%
2r78C00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.63 36.0 3.09e-01 90.3% 33.6%
4hoiB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.62 38.0 3.30e-01 88.9% 37.7%
5n9bA01 2.60.40.2160 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 0.61 51.0 4.09e-01 90.3% 52.6%
3icyA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.61 37.0 3.20e-01 90.3% 37.3%
7a6pB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.61 37.0 3.04e-01 88.9% 31.2%
5svgC00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.60 37.0 3.19e-01 90.3% 36.4%
2z6cA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.60 37.0 3.15e-01 88.9% 35.5%
4r3aA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.60 37.0 2.88e-01 90.3% 25.0%
5iu1B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.60 37.0 3.26e-01 90.3% 39.3%
1lj5A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.60 51.0 4.08e-01 98.6% 95.5%
3h9wA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.59 36.0 3.18e-01 88.9% 39.4%
3butA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 49.0 4.14e-01 94.4% 80.8%
3mjqA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 35.0 3.10e-01 87.5% 38.3%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 34.0 3.79e-01 93.1% 74.5%
4f3lA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 36.0 3.12e-01 90.3% 36.9%
1s67L00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 35.0 3.02e-01 90.3% 35.3%
3mr0A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 34.0 3.03e-01 88.9% 39.1%
3obaA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 45.0 3.43e-01 93.1% 80.4%
1e5tA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 41.0 2.65e-01 77.8% 78.4%
2gj3A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 35.0 3.01e-01 88.9% 36.1%
3mfxB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 33.0 2.89e-01 87.5% 34.2%
3lyxB00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 35.0 3.08e-01 90.3% 38.3%
1d06A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 33.0 2.84e-01 87.5% 30.8%
1vmeB01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.55 49.0 3.36e-01 98.6% 91.6%
3f02B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.55 42.0 3.89e-01 87.5% 100.0%
4dj3B02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.54 34.0 2.76e-01 90.3% 29.2%
3ulpD00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 39.0 3.44e-01 77.8% 95.6%
4ojdH01 2.60.98.60 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 0.53 40.0 3.13e-01 95.8% 36.6%
3racA00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.53 43.0 2.84e-01 91.7% 67.8%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 38.0 3.38e-01 77.8% 90.9%
4mj3B00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 39.0 2.62e-01 80.6% 91.4%
1jkmA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 39.0 2.49e-01 79.2% 77.9%
3tw8A01 3.30.450.200 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module 0.52 33.0 2.69e-01 91.7% 34.1%
1ae2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 45.0 4.28e-01 97.2% 89.5%
4hiaA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 38.0 2.89e-01 93.1% 32.4%
3fgqA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 44.0 3.39e-01 100.0% 68.1%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 45.0 3.89e-01 100.0% 62.3%
2xgjA05 2.40.30.300 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.51 42.0 3.57e-01 94.4% 56.9%
7uwjC01 2.60.40.2160 Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 0.51 42.0 3.58e-01 91.7% 56.2%
5l16A01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.51 41.0 3.59e-01 94.4% 99.2%
1pfsA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 41.0 4.04e-01 97.2% 80.8%
3k4zA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 41.0 3.26e-01 93.1% 81.5%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 35.0 3.22e-01 76.4% 98.1%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3735309 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.73 46.0 4.24e-01 90.3% 51.1%
5045588 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.72 43.0 3.54e-01 88.9% 35.8%
5044941 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.72 42.0 3.75e-01 88.9% 40.0%
4960088 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.72 44.0 3.64e-01 88.9% 36.7%
5046747 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.71 41.0 2.58e-01 91.7% 11.2%
5047295 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.71 42.0 3.65e-01 88.9% 39.1%
4997159 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.71 43.0 3.38e-01 90.3% 30.3%
4977581 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.70 41.0 3.53e-01 88.9% 36.5%
4957167 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.69 40.0 2.76e-01 88.9% 16.7%
4989239 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.69 43.0 3.70e-01 90.3% 40.9%
4930499 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.69 42.0 2.89e-01 87.5% 18.8%
5018462 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.68 40.0 2.73e-01 90.3% 16.2%
4557742 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.68 41.0 3.45e-01 90.3% 35.8%
5002153 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.68 39.0 3.48e-01 91.7% 40.0%
4551342 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.68 42.0 3.99e-01 90.3% 52.9%
5019127 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.66 40.0 2.45e-01 88.9% 10.9%
3254148 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.66 40.0 3.56e-01 88.9% 43.0%
4949077 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.65 41.0 3.66e-01 90.3% 45.0%
4999857 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.65 40.0 3.36e-01 88.9% 36.7%
2440125 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.65 42.0 3.54e-01 90.3% 39.3%
5045028 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.65 38.0 2.62e-01 88.9% 16.1%
4979994 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.65 39.0 3.21e-01 90.3% 31.9%
4962862 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.64 38.0 3.23e-01 90.3% 33.6%
5045728 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.64 38.0 3.17e-01 90.3% 32.3%
3290405 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.64 39.0 3.23e-01 88.9% 33.1%
4980669 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.64 39.0 3.22e-01 90.3% 33.1%
5019276 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.63 39.0 2.71e-01 90.3% 17.3%
5047125 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.63 37.0 2.56e-01 87.5% 15.8%
5045368 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.63 40.0 3.25e-01 90.3% 32.9%
4960111 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.63 39.0 3.22e-01 90.3% 33.8%
4949125 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.63 38.0 3.01e-01 88.9% 29.3%
4963860 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.63 38.0 3.26e-01 88.9% 36.5%
5069527 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.63 38.0 3.33e-01 88.9% 39.1%
4348177 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.62 38.0 3.11e-01 88.9% 31.9%
5065470 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.62 39.0 3.22e-01 90.3% 36.7%
4959633 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.62 38.0 2.63e-01 88.9% 16.9%
5039180 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.62 38.0 2.66e-01 90.3% 18.7%
4950576 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.62 38.0 3.03e-01 88.9% 29.7%
5068525 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.62 38.0 3.05e-01 88.9% 30.7%
4958260 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.62 38.0 3.38e-01 90.3% 41.9%
5018633 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.62 37.0 3.04e-01 88.9% 30.7%
4960078 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.62 37.0 2.57e-01 90.3% 16.5%
3967163 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.62 37.0 3.12e-01 88.9% 33.1%
4939729 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.61 38.0 3.21e-01 90.3% 35.2%
3543555 223.1.1.29 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 0.61 39.0 3.20e-01 91.7% 34.8%
137752 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.61 37.0 3.20e-01 90.3% 37.3%
5044926 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.60 36.0 3.26e-01 90.3% 41.0%
4951779 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.60 37.0 3.17e-01 90.3% 36.7%
4973551 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.60 36.0 3.08e-01 88.9% 34.4%
5045423 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.60 36.0 2.51e-01 87.5% 17.9%
5047296 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.59 36.0 3.14e-01 90.3% 37.4%
4957160 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.59 36.0 2.85e-01 90.3% 28.7%
4960084 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.59 36.0 2.49e-01 90.3% 15.7%
5018818 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.59 37.0 2.58e-01 88.9% 18.4%
4957920 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.59 35.0 3.08e-01 88.9% 37.4%
4960098 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.58 36.0 3.08e-01 88.9% 35.8%
5021006 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.58 36.0 2.84e-01 88.9% 28.4%
3967615 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.58 35.0 3.02e-01 88.9% 34.4%
5006334 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.58 35.0 2.95e-01 88.9% 31.9%
5045471 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.58 37.0 3.16e-01 90.3% 38.3%
4950593 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.58 36.0 2.97e-01 90.3% 32.6%
4940001 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.57 35.0 3.16e-01 88.9% 42.0%
5048056 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.57 36.0 3.10e-01 90.3% 36.8%
4988390 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.57 35.0 3.18e-01 90.3% 41.9%
4958865 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.57 35.0 2.91e-01 88.9% 33.1%
5049663 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.57 35.0 2.94e-01 90.3% 32.6%
3968855 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.56 34.0 2.89e-01 90.3% 33.1%
3018456 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.56 34.0 2.73e-01 90.3% 27.4%
3196169 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.55 44.0 4.03e-01 91.7% 97.0%
3971533 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.55 35.0 3.16e-01 90.3% 44.8%
4960079 223.1.1.25 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.54 34.0 2.92e-01 90.3% 36.7%
4958221 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.54 34.0 2.36e-01 91.7% 16.4%
3707971 2007.2.3.3 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Syja_N 0.54 40.0 2.66e-01 81.9% 77.4%
5053533 223.1.1.13 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 0.54 33.0 2.62e-01 90.3% 26.1%
4927936 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 48.0 4.59e-01 100.0% 83.5%
3995523 223.2.1.4 a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN 0.52 44.0 3.30e-01 91.7% 53.5%
3934401 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 43.0 3.79e-01 94.4% 73.6%
3425057 3887.2.1.1 a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung 0.51 42.0 3.79e-01 90.3% 71.0%
3623034 223.2.1.6 a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.50 42.0 3.09e-01 91.7% 48.4%
4984611 2004.1.1.16 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.50 43.0 3.11e-01 97.2% 39.4%