←Back to structures
KM923971.1__AJK27397.1__PBI_KRATIO_68__00067
Bact-VirKM923971.1__AJK27397.1__PBI_KRATIO_68__00067
Identity
- Accession:
- KM923971 ↗
- Kingdom:
- phage
Quality
75.5
mean pLDDT
Taxonomy
TaxID: 1606763
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-72
Domain cluster:
rep: OP434461.1__UYL88184.1__SEA_EVAA_73__00073__D3-77
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.77 | 62.0 | 5.90e-01 | 84.7% | 100.0% |
| 2af5A02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.74 | 51.0 | 4.04e-01 | 70.8% | 39.1% |
| 3gmvX00 | 3.10.450.730 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › BLIP domain | 0.74 | 64.0 | 4.93e-01 | 94.4% | 64.7% |
| 3bpqD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.73 | 51.0 | 4.81e-01 | 86.1% | 60.5% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.71 | 52.0 | 4.15e-01 | 76.4% | 58.3% |
| 8aimG01 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.71 | 56.0 | 5.40e-01 | 84.7% | 100.0% |
| 3fyfA00 | 2.40.128.410 | Mainly Beta › Beta Barrel › Lipocalin › | 0.70 | 59.0 | 4.67e-01 | 93.1% | 81.2% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.70 | 57.0 | 3.88e-01 | 88.9% | 40.8% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 57.0 | 4.55e-01 | 88.9% | 60.3% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.69 | 52.0 | 3.28e-01 | 77.8% | 29.6% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 57.0 | 4.20e-01 | 88.9% | 46.4% |
| 2i0rA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.69 | 53.0 | 3.36e-01 | 80.6% | 29.1% |
| 4h0aA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.69 | 58.0 | 3.82e-01 | 91.7% | 43.8% |
| 4ozuA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.69 | 50.0 | 3.18e-01 | 76.4% | 25.4% |
| 3v0rA01 | 2.40.350.20 | Mainly Beta › Beta Barrel › AOC barrel-like › | 0.68 | 47.0 | 4.01e-01 | 72.2% | 59.2% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.68 | 56.0 | 4.13e-01 | 88.9% | 36.2% |
| 3exmA01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.67 | 57.0 | 4.19e-01 | 94.4% | 68.7% |
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.66 | 50.0 | 3.18e-01 | 80.6% | 35.2% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 50.0 | 3.21e-01 | 81.9% | 32.3% |
| 6igbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 48.0 | 3.03e-01 | 77.8% | 19.0% |
| 3fzxA00 | 2.40.360.20 | Mainly Beta › Beta Barrel › YmcC-like fold › | 0.66 | 57.0 | 4.16e-01 | 100.0% | 93.4% |
| 2mqdA00 | 3.30.1460.60 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.64 | 53.0 | 4.52e-01 | 91.7% | 73.1% |
| 4wvmA04 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.64 | 47.0 | 3.49e-01 | 79.2% | 83.0% |
| 1qwyA02 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.64 | 54.0 | 4.10e-01 | 93.1% | 70.3% |
| 2zfdB00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.64 | 56.0 | 4.74e-01 | 95.8% | 69.8% |
| 5ov3B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 47.0 | 3.07e-01 | 77.8% | 23.4% |
| 3sc7X01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.64 | 49.0 | 3.18e-01 | 83.3% | 36.9% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.64 | 47.0 | 3.03e-01 | 80.6% | 25.9% |
| 1cruA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.63 | 47.0 | 2.90e-01 | 80.6% | 41.5% |
| 7x36A01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.63 | 47.0 | 3.04e-01 | 79.2% | 41.2% |
| 3mh9A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.63 | 49.0 | 3.65e-01 | 88.9% | 87.8% |
| 1b9vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.62 | 46.0 | 2.94e-01 | 81.9% | 26.7% |
| 2yzyA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.61 | 56.0 | 4.21e-01 | 98.6% | 75.5% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.61 | 44.0 | 4.51e-01 | 76.4% | 91.5% |
| 6bbtB01 | 2.60.40.3050 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 50.0 | 4.03e-01 | 90.3% | 93.6% |
| 5m8cB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 45.0 | 2.92e-01 | 79.2% | 18.2% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.61 | 43.0 | 3.49e-01 | 73.6% | 83.6% |
| 3p8aA02 | 2.60.40.4320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 48.0 | 4.50e-01 | 87.5% | 78.9% |
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.60 | 46.0 | 4.22e-01 | 81.9% | 85.3% |
| 1q57G01 | 2.20.25.180 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 49.0 | 4.93e-01 | 90.3% | 94.5% |
| 4lqbA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 46.0 | 3.83e-01 | 83.3% | 85.4% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.60 | 51.0 | 3.91e-01 | 97.2% | 85.9% |
| 1yuaA02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 42.0 | 4.48e-01 | 80.6% | 91.4% |
| 1eqnB01 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.59 | 50.0 | 4.21e-01 | 95.8% | 99.2% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.58 | 46.0 | 4.21e-01 | 88.9% | 86.0% |
| 2wcoA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.58 | 44.0 | 3.78e-01 | 81.9% | 92.2% |
| 4tpsA00 | 3.30.310.250 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA | 0.58 | 48.0 | 3.88e-01 | 93.1% | 52.1% |
| 3d8pB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 39.0 | 3.15e-01 | 73.6% | 96.9% |
| 1h6lA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.56 | 43.0 | 2.78e-01 | 83.3% | 36.8% |
| 3gy9A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 39.0 | 3.09e-01 | 72.2% | 76.4% |
| 6eufA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 43.0 | 3.00e-01 | 97.2% | 92.9% |
| 1iicA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 45.0 | 3.20e-01 | 100.0% | 66.1% |
| 1mhmA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.53 | 43.0 | 3.08e-01 | 95.8% | 37.5% |
| 2avwD01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 43.0 | 3.59e-01 | 95.8% | 68.8% |
| 2ft0A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 43.0 | 3.14e-01 | 95.8% | 64.0% |
| 1yx2A02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.51 | 42.0 | 3.99e-01 | 93.1% | 93.0% |
ECOD (74)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4950477 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.83 | 64.0 | 6.35e-01 | 86.1% | 78.7% |
| 3168452 | 331.10.2.3 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › Med1 | 0.79 | 67.0 | 5.79e-01 | 90.3% | 80.0% |
| 3970643 | 9002.1.1.0 ↗ | a/b three-layered sandwiches › ATP-grasp_6 › ATP-grasp_6 › ATP-grasp_6 | 0.79 | 50.0 | 5.90e-01 | 88.9% | 94.0% |
| 3738183 | 4099.1.1.10 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 | 0.79 | 69.0 | 5.64e-01 | 94.4% | 64.8% |
| 3625247 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.78 | 65.0 | 5.62e-01 | 90.3% | 64.5% |
| 4951171 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.78 | 58.0 | 5.95e-01 | 83.3% | 81.4% |
| 3729944 | 4099.1.1.10 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 | 0.78 | 69.0 | 5.90e-01 | 95.8% | 73.6% |
| 4235474 | 4237.1.1.1 ↗ | beta barrels › FomD-like › FomD-like › FomD-like › DUF402 | 0.76 | 59.0 | 4.44e-01 | 81.9% | 52.4% |
| 4031984 | 3894.1.1.1 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 | 0.76 | 62.0 | 5.10e-01 | 97.2% | 50.4% |
| 4122018 | 4099.1.1.10 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 | 0.75 | 66.0 | 5.91e-01 | 95.8% | 81.0% |
| 3486202 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.74 | 55.0 | 3.31e-01 | 77.8% | 14.7% |
| 4114467 | 4237.1.1.1 ↗ | beta barrels › FomD-like › FomD-like › FomD-like › DUF402 | 0.71 | 60.0 | 4.50e-01 | 93.1% | 61.8% |
| 3067253 | 243.8.1.2 ↗ | a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein › UDI | 0.71 | 59.0 | 5.55e-01 | 90.3% | 98.8% |
| 4994605 | 4237.1.1.1 ↗ | beta barrels › FomD-like › FomD-like › FomD-like › DUF402 | 0.68 | 59.0 | 4.50e-01 | 95.8% | 67.3% |
| 3240119 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.67 | 53.0 | 4.61e-01 | 83.3% | 81.0% |
| 2581425 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.67 | 47.0 | 5.23e-01 | 77.8% | 96.4% |
| 1003930 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.67 | 46.0 | 4.49e-01 | 70.8% | 69.6% |
| 3719333 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 50.0 | 3.09e-01 | 79.2% | 28.9% |
| 3622828 | 5.1.4.319 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_1st | 0.66 | 49.0 | 3.07e-01 | 77.8% | 30.3% |
| 3229482 | 71.1.1.19 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 | 0.66 | 60.0 | 4.29e-01 | 100.0% | 70.2% |
| 4373611 | 4237.1.1.1 ↗ | beta barrels › FomD-like › FomD-like › FomD-like › DUF402 | 0.66 | 58.0 | 4.34e-01 | 97.2% | 64.0% |
| 5031617 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.66 | 49.0 | 4.81e-01 | 80.6% | 100.0% |
| 2418904 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.66 | 48.0 | 3.03e-01 | 77.8% | 19.0% |
| 4004174 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.65 | 48.0 | 3.15e-01 | 77.8% | 22.4% |
| 3546198 | 5.1.4.149 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR54 | 0.64 | 49.0 | 3.17e-01 | 81.9% | 29.0% |
| 3714740 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.64 | 46.0 | 3.89e-01 | 76.4% | 60.0% |
| 4498332 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.64 | 51.0 | 3.91e-01 | 87.5% | 78.8% |
| 3253682 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.63 | 45.0 | 3.56e-01 | 75.0% | 41.3% |
| 4110683 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.62 | 53.0 | 3.99e-01 | 95.8% | 89.2% |
| 3851969 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.62 | 52.0 | 3.75e-01 | 91.7% | 33.3% |
| 4380974 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.62 | 50.0 | 3.90e-01 | 88.9% | 96.2% |
| 4030530 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.62 | 53.0 | 4.48e-01 | 94.4% | 59.2% |
| 1171964 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.62 | 42.0 | 4.54e-01 | 75.0% | 89.7% |
| 6450 | 4023.1.1.2 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › Helic-prim_T7_N | 0.62 | 50.0 | 5.05e-01 | 90.3% | 94.5% |
| 3858437 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.62 | 45.0 | 3.30e-01 | 77.8% | 30.3% |
| 3794752 | 5.1.3.222 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_LRRK2 | 0.61 | 48.0 | 3.02e-01 | 86.1% | 34.7% |
| 3617341 | 5.1.4.320 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 | 0.61 | 48.0 | 3.00e-01 | 86.1% | 33.7% |
| 3226259 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.61 | 41.0 | 3.08e-01 | 75.0% | 29.4% |
| 3229434 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.60 | 49.0 | 3.17e-01 | 87.5% | 32.3% |
| 4583479 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.60 | 52.0 | 3.96e-01 | 97.2% | 80.9% |
| 3380338 | 210.1.2.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT | 0.60 | 48.0 | 3.34e-01 | 90.3% | 77.3% |
| 4347651 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.60 | 51.0 | 3.81e-01 | 95.8% | 81.1% |
| 4188272 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.59 | 51.0 | 4.01e-01 | 100.0% | 98.1% |
| 3748485 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.58 | 47.0 | 3.49e-01 | 90.3% | 33.3% |
| 4024499 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.58 | 42.0 | 3.37e-01 | 77.8% | 41.3% |
| 3199457 | 59.1.2.1 ↗ | beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C › RNase_H2_suC | 0.58 | 46.0 | 4.30e-01 | 86.1% | 91.1% |
| 4127270 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.58 | 50.0 | 3.78e-01 | 95.8% | 83.3% |
| 4067273 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.58 | 50.0 | 3.90e-01 | 100.0% | 98.8% |
| 3890448 | 77.3.1.3 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN | 0.58 | 42.0 | 3.58e-01 | 77.8% | 55.8% |
| 5000056 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 49.0 | 4.18e-01 | 95.8% | 81.7% |
| 4324615 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.57 | 46.0 | 3.60e-01 | 87.5% | 44.5% |
| 3601033 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.57 | 41.0 | 3.32e-01 | 76.4% | 44.8% |
| 3531694 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.57 | 42.0 | 2.89e-01 | 77.8% | 23.8% |
| 3844285 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.57 | 41.0 | 3.25e-01 | 76.4% | 45.2% |
| 3243074 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.57 | 41.0 | 4.31e-01 | 84.7% | 86.2% |
| 5048686 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 48.0 | 4.06e-01 | 95.8% | 80.0% |
| 4030599 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.56 | 46.0 | 3.70e-01 | 90.3% | 51.7% |
| 2184 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 42.0 | 2.79e-01 | 80.6% | 32.5% |
| 3268625 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.56 | 41.0 | 2.91e-01 | 77.8% | 28.2% |
| 3236522 | 145.1.1.30 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › FBA_2 | 0.56 | 45.0 | 2.98e-01 | 90.3% | 22.6% |
| 3635423 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.55 | 47.0 | 3.60e-01 | 100.0% | 67.0% |
| 3793430 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.55 | 46.0 | 4.26e-01 | 97.2% | 83.2% |
| 4057793 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.55 | 47.0 | 3.66e-01 | 97.2% | 90.3% |
| 3732943 | 3561.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Med17 | 0.55 | 45.0 | 2.96e-01 | 93.1% | 29.1% |
| 3311784 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.55 | 40.0 | 3.37e-01 | 77.8% | 53.6% |
| 3789882 | 5.1.3.117 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 | 0.54 | 40.0 | 2.73e-01 | 81.9% | 30.2% |
| 3612462 | 77.3.1.3 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN | 0.54 | 39.0 | 3.39e-01 | 76.4% | 56.5% |
| 4107854 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.54 | 40.0 | 3.59e-01 | 80.6% | 59.0% |
| 4029687 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.54 | 44.0 | 3.66e-01 | 90.3% | 74.6% |
| 3539857 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.54 | 39.0 | 2.87e-01 | 77.8% | 28.8% |
| 3595247 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.54 | 39.0 | 3.23e-01 | 76.4% | 45.4% |
| 3718320 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.53 | 38.0 | 2.55e-01 | 76.4% | 21.3% |
| 3614805 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.51 | 40.0 | 2.77e-01 | 86.1% | 34.3% |
| 3611492 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.50 | 39.0 | 2.71e-01 | 86.1% | 24.1% |
D2
medium
residues 73-145
Domain cluster:
representative
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hsbA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.74 | 59.0 | 4.98e-01 | 89.0% | 96.8% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.73 | 61.0 | 5.81e-01 | 90.4% | 94.1% |
| 1tqgA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.72 | 60.0 | 5.41e-01 | 94.5% | 99.0% |
| 2yxhA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.72 | 51.0 | 4.44e-01 | 75.3% | 57.5% |
| 3agtA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.71 | 58.0 | 4.82e-01 | 90.4% | 82.0% |
| 2jx0A00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.71 | 58.0 | 4.87e-01 | 91.8% | 86.3% |
| 4doyA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.71 | 52.0 | 3.87e-01 | 78.1% | 52.5% |
| 3anwA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 49.0 | 4.30e-01 | 74.0% | 54.0% |
| 5o5jT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.70 | 53.0 | 5.01e-01 | 79.5% | 74.1% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.70 | 54.0 | 4.67e-01 | 83.6% | 88.6% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 49.0 | 4.44e-01 | 74.0% | 67.3% |
| 1rv2D04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.70 | 48.0 | 4.88e-01 | 71.2% | 74.3% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.70 | 50.0 | 4.56e-01 | 93.2% | 56.7% |
| 3c18A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.70 | 58.0 | 5.04e-01 | 95.9% | 89.0% |
| 2cmrA00 | 1.20.58.1860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 52.0 | 3.92e-01 | 82.2% | 57.8% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.70 | 48.0 | 4.62e-01 | 72.6% | 81.2% |
| 4adzA00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.69 | 50.0 | 4.67e-01 | 76.7% | 100.0% |
| 3nkzA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.68 | 50.0 | 4.59e-01 | 79.5% | 81.4% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.68 | 47.0 | 4.55e-01 | 74.0% | 63.5% |
| 3kmiA00 | 1.20.120.940 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Putative aromatic acid exporter, C-terminal domain | 0.68 | 49.0 | 3.79e-01 | 78.1% | 84.3% |
| 3gw4A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 45.0 | 3.37e-01 | 74.0% | 26.6% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.67 | 47.0 | 3.96e-01 | 74.0% | 58.9% |
| 4u1cA01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.66 | 45.0 | 4.97e-01 | 91.8% | 100.0% |
| 3u8vA00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.66 | 52.0 | 5.07e-01 | 87.7% | 100.0% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.66 | 51.0 | 4.98e-01 | 82.2% | 83.5% |
| 6adqG01 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.65 | 54.0 | 4.19e-01 | 95.9% | 71.9% |
| 1nafA02 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 50.0 | 4.84e-01 | 98.6% | 72.9% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.65 | 56.0 | 4.91e-01 | 91.8% | 79.6% |
| 2xl4A00 | 1.20.120.1420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › LntA helical domain | 0.65 | 56.0 | 4.47e-01 | 95.9% | 95.2% |
| 1y6xA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.65 | 52.0 | 4.93e-01 | 87.7% | 79.3% |
| 1jalA03 | 1.10.150.300 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain | 0.65 | 45.0 | 4.37e-01 | 72.6% | 74.1% |
| 3cwzB01 | 1.20.58.900 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain | 0.65 | 53.0 | 4.38e-01 | 95.9% | 80.8% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 53.0 | 4.58e-01 | 90.4% | 88.5% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.64 | 50.0 | 4.52e-01 | 84.9% | 67.7% |
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.64 | 51.0 | 4.55e-01 | 86.3% | 79.4% |
| 1m56C02 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.63 | 55.0 | 3.97e-01 | 94.5% | 83.2% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.63 | 47.0 | 4.71e-01 | 80.8% | 84.0% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 42.0 | 4.12e-01 | 87.7% | 62.7% |
| 4uskA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.62 | 47.0 | 3.84e-01 | 84.9% | 48.7% |
| 1yw0A00 | 1.20.58.480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 53.0 | 3.69e-01 | 95.9% | 77.4% |
| 3gonA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.62 | 48.0 | 4.02e-01 | 86.3% | 56.0% |
| 3caxA01 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.61 | 50.0 | 3.73e-01 | 95.9% | 57.6% |
| 1j1jA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.61 | 50.0 | 4.21e-01 | 93.2% | 59.1% |
| 3kflA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.61 | 52.0 | 4.02e-01 | 97.3% | 65.1% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.61 | 47.0 | 3.81e-01 | 84.9% | 51.7% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 49.0 | 3.76e-01 | 93.2% | 54.3% |
| 7nmqA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.60 | 49.0 | 3.29e-01 | 97.3% | 78.9% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.60 | 46.0 | 3.92e-01 | 93.2% | 49.2% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.60 | 49.0 | 4.55e-01 | 90.4% | 81.7% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.60 | 51.0 | 4.57e-01 | 93.2% | 78.4% |
| 1zk8B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 47.0 | 3.87e-01 | 84.9% | 80.3% |
| 1cpqA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.60 | 49.0 | 4.21e-01 | 95.9% | 96.1% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 52.0 | 4.31e-01 | 97.3% | 73.8% |
| 3r2kA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 48.0 | 3.83e-01 | 97.3% | 42.9% |
| 6a7hA01 | 1.20.140.180 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.59 | 47.0 | 3.93e-01 | 89.0% | 53.8% |
| 4nnaA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 43.0 | 2.82e-01 | 79.5% | 37.2% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.59 | 48.0 | 4.14e-01 | 95.9% | 82.4% |
| 4g10A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 45.0 | 3.77e-01 | 87.7% | 75.0% |
| 1yy7A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 44.0 | 3.95e-01 | 82.2% | 88.6% |
| 2ondA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 46.0 | 3.11e-01 | 91.8% | 30.8% |
| 3dzaA01 | 1.20.120.1940 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YfdX protein domain | 0.55 | 44.0 | 3.84e-01 | 100.0% | 56.4% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 42.0 | 3.45e-01 | 95.9% | 51.7% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3966985 | 3922.1.1.19 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF1090 | 0.78 | 54.0 | 4.74e-01 | 71.2% | 87.5% |
| 3236340 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.76 | 65.0 | 4.96e-01 | 94.5% | 86.5% |
| 3677594 | 3291.1.1.110 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › DUF641 | 0.76 | 52.0 | 4.17e-01 | 71.2% | 37.1% |
| 5041010 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.74 | 61.0 | 5.18e-01 | 93.2% | 97.6% |
| 3643501 | 192.1.1.47 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF641 | 0.73 | 50.0 | 5.25e-01 | 71.2% | 80.0% |
| 4954837 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.71 | 61.0 | 4.94e-01 | 95.9% | 93.6% |
| 4193935 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.71 | 54.0 | 5.12e-01 | 79.5% | 71.8% |
| 3375617 | 192.5.1.30 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF641 | 0.71 | 49.0 | 4.77e-01 | 71.2% | 65.0% |
| 5053890 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.71 | 59.0 | 5.14e-01 | 93.2% | 100.0% |
| 4290271 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.71 | 53.0 | 4.91e-01 | 78.1% | 70.0% |
| 5031827 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.71 | 60.0 | 5.02e-01 | 97.3% | 95.6% |
| 3550167 | 109.4.1.3198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_CUL7_CUL9, PF26718 | 0.71 | 51.0 | 3.11e-01 | 75.3% | 65.8% |
| 3316910 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.71 | 51.0 | 4.01e-01 | 76.7% | 45.2% |
| 5049135 | 109.7.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E | 0.71 | 52.0 | 5.35e-01 | 78.1% | 82.9% |
| 4474310 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.71 | 53.0 | 5.16e-01 | 79.5% | 78.8% |
| 3167959 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.70 | 53.0 | 4.09e-01 | 82.2% | 86.5% |
| 3971935 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.70 | 59.0 | 5.25e-01 | 97.3% | 99.1% |
| 3583302 | 633.23.1.4 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 | 0.70 | 54.0 | 4.35e-01 | 83.6% | 72.1% |
| 5065421 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.70 | 58.0 | 4.88e-01 | 94.5% | 97.7% |
| 4321884 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.69 | 53.0 | 4.87e-01 | 80.8% | 66.7% |
| 4668964 | 604.9.1.0 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 | 0.69 | 54.0 | 5.09e-01 | 82.2% | 71.8% |
| 4088690 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.69 | 52.0 | 5.04e-01 | 79.5% | 80.0% |
| 3940649 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.68 | 50.0 | 4.85e-01 | 100.0% | 70.0% |
| 4063100 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.68 | 51.0 | 4.98e-01 | 79.5% | 76.2% |
| 3212252 | 109.4.1.91 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec10_HB | 0.68 | 54.0 | 3.23e-01 | 87.7% | 19.3% |
| 3260122 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.68 | 57.0 | 4.14e-01 | 95.9% | 96.8% |
| 3604350 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.68 | 58.0 | 4.93e-01 | 95.9% | 83.3% |
| 4095914 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.68 | 51.0 | 4.95e-01 | 79.5% | 76.2% |
| 3264401 | 6132.1.1.0 ↗ | alpha bundles › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain › Nudix hydrolase N-terminal dimerization domain | 0.67 | 52.0 | 5.20e-01 | 82.2% | 89.3% |
| 4979971 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.67 | 52.0 | 4.26e-01 | 82.2% | 84.6% |
| 3580283 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.67 | 53.0 | 5.06e-01 | 94.5% | 72.9% |
| 3923954 | 601.1.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin | 0.66 | 53.0 | 4.42e-01 | 90.4% | 90.4% |
| 3823586 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.66 | 58.0 | 4.36e-01 | 95.9% | 54.7% |
| 3465357 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.66 | 52.0 | 4.44e-01 | 84.9% | 78.3% |
| 2410389 | 5039.1.1.1 ↗ | alpha bundles › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › Cytochrome c oxidase subunit III-like › COX3 | 0.65 | 54.0 | 4.04e-01 | 95.9% | 63.1% |
| 3317397 | 603.1.1.17 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE | 0.64 | 54.0 | 3.86e-01 | 90.4% | 40.5% |
| 3301847 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.64 | 52.0 | 4.70e-01 | 87.7% | 84.0% |
| 3371182 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.64 | 47.0 | 4.24e-01 | 79.5% | 74.3% |
| 4056285 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.64 | 48.0 | 4.43e-01 | 80.8% | 65.3% |
| 3224585 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.64 | 52.0 | 4.56e-01 | 89.0% | 71.8% |
| 3510367 | 603.1.1.99 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF27021 | 0.64 | 52.0 | 4.07e-01 | 89.0% | 50.3% |
| 3407072 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.64 | 48.0 | 4.71e-01 | 82.2% | 86.3% |
| 3303315 | 603.1.1.3 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE | 0.64 | 52.0 | 4.09e-01 | 89.0% | 55.3% |
| 3408380 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.63 | 53.0 | 4.74e-01 | 90.4% | 81.0% |
| 3363789 | 109.4.1.285 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PSMD12-CSN4_N | 0.63 | 48.0 | 3.17e-01 | 83.6% | 18.2% |
| 3317539 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.63 | 54.0 | 4.59e-01 | 91.8% | 73.0% |
| 3268622 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.63 | 48.0 | 4.33e-01 | 83.6% | 66.7% |
| 3725527 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.63 | 55.0 | 4.34e-01 | 97.3% | 71.3% |
| 4034204 | 5069.1.1.5 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cyt_bd_oxida_II | 0.63 | 52.0 | 4.04e-01 | 95.9% | 65.1% |
| 5013248 | 601.3.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt | 0.63 | 52.0 | 4.49e-01 | 97.3% | 79.2% |
| 3336677 | 605.1.1.132 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › DUF641 | 0.63 | 43.0 | 4.27e-01 | 71.2% | 69.3% |
| 3463676 | 109.4.1.1186 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF6857 | 0.62 | 51.0 | 3.98e-01 | 89.0% | 43.9% |
| 5041256 | 601.4.1.91 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › PF30769 | 0.62 | 51.0 | 4.64e-01 | 95.9% | 94.3% |
| 3442429 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.62 | 52.0 | 3.85e-01 | 91.8% | 45.4% |
| 3321310 | 603.1.1.5 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N | 0.62 | 51.0 | 4.30e-01 | 89.0% | 73.3% |
| 3488877 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.62 | 52.0 | 3.53e-01 | 94.5% | 70.4% |
| 4030142 | 109.4.1.44 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps35 | 0.62 | 48.0 | 2.74e-01 | 84.9% | 8.3% |
| 3632454 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.62 | 54.0 | 5.14e-01 | 94.5% | 83.5% |
| 5062478 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.61 | 50.0 | 4.72e-01 | 90.4% | 77.8% |
| 3699649 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.61 | 52.0 | 3.96e-01 | 93.2% | 49.1% |
| 3706209 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.60 | 52.0 | 4.12e-01 | 94.5% | 57.2% |
| 3829016 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.60 | 48.0 | 4.08e-01 | 89.0% | 60.0% |
| 2780929 | 4229.1.1.1 ↗ | alpha bundles › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › Indolic compounds 2,3-dioxygenase-like › IDO | 0.60 | 51.0 | 3.61e-01 | 95.9% | 85.7% |
| 3609402 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 47.0 | 3.54e-01 | 89.0% | 46.7% |
| 3539633 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.59 | 49.0 | 3.52e-01 | 94.5% | 37.0% |
| 3643042 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.58 | 49.0 | 3.62e-01 | 94.5% | 78.0% |
| 3610860 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.58 | 51.0 | 4.15e-01 | 100.0% | 65.7% |
| 4170989 | 150.1.1.59 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Coat_F | 0.58 | 48.0 | 3.85e-01 | 93.2% | 98.7% |
| 3784397 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.58 | 52.0 | 3.64e-01 | 100.0% | 56.2% |
| 3926031 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.57 | 46.0 | 4.27e-01 | 100.0% | 69.5% |