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KM983327.1__AJA42518.1__phiCT453A_28__00028

Bact-Vir

KM983327.1__AJA42518.1__phiCT453A_28__00028

Identity

Accession:
KM983327 ↗
Kingdom:
phage

Quality

91.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clostridium_phage_phiCT453A

TaxID: 1567012

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 36-115
PDB
Domain cluster: rep: MZ634347.1__UJD05385.1__PWKp16_00031__00031__D17-75
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3b5qA00 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.65 47.0 2.89e-01 75.0% 76.5%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 44.0 2.83e-01 70.0% 69.8%
1genA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.63 47.0 3.48e-01 78.8% 90.5%
2zdiC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.61 54.0 4.35e-01 96.2% 54.7%
4amwA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.60 45.0 2.97e-01 78.8% 85.5%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.60 42.0 3.31e-01 73.8% 63.2%
7vcoA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.59 48.0 3.98e-01 91.3% 94.7%
1qhuA01 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.59 41.0 3.08e-01 71.2% 84.7%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 44.0 2.82e-01 80.0% 93.2%
4nsxA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 41.0 2.81e-01 73.8% 37.3%
8b55A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 46.0 3.65e-01 88.7% 88.8%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 36.0 3.47e-01 90.0% 56.2%
1xfdA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.58 47.0 2.98e-01 91.3% 50.2%
3pijA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.57 48.0 3.94e-01 95.0% 100.0%
4a2lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 43.0 2.84e-01 81.2% 94.2%
3ikwA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 45.0 3.12e-01 91.3% 88.4%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.56 49.0 4.04e-01 100.0% 92.0%
3azwA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 49.0 3.57e-01 100.0% 90.4%
3v9fA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 42.0 2.85e-01 81.2% 52.3%
4eqvA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.55 47.0 3.69e-01 95.0% 96.0%
1itvA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.55 42.0 3.17e-01 82.5% 91.8%
3asiA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 3.49e-01 90.0% 89.3%
5mc9A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 3.43e-01 88.7% 89.0%
2r16A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 3.53e-01 91.3% 92.0%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.55 43.0 3.39e-01 86.3% 72.3%
6hgcA01 3.40.532.10 Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase 0.54 43.0 3.29e-01 86.3% 82.2%
4ba0A01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.54 41.0 3.07e-01 80.0% 94.5%
1yprA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.54 39.0 3.46e-01 78.8% 50.4%
4esnA00 2.60.320.10 Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain 0.54 40.0 4.12e-01 81.2% 91.0%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.54 41.0 3.83e-01 82.5% 73.3%
1xd3C00 3.40.532.10 Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase 0.54 41.0 2.99e-01 82.5% 78.0%
2h0bC00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 43.0 3.38e-01 90.0% 90.7%
1y4wA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.53 44.0 3.64e-01 97.5% 95.1%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 47.0 3.44e-01 100.0% 44.8%
1pz7A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 42.0 3.27e-01 88.7% 81.4%
3lnbA00 3.30.2140.20 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › 0.53 39.0 2.86e-01 82.5% 95.6%
4mxtA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 45.0 3.50e-01 100.0% 65.2%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 42.0 3.70e-01 92.5% 93.7%
4u7aA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 45.0 2.96e-01 97.5% 92.1%
7x36A01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 42.0 2.94e-01 98.8% 95.1%
4wi1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.51 42.0 3.66e-01 91.3% 100.0%
7uhyA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 41.0 2.93e-01 98.8% 98.4%
3ottA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 42.0 2.90e-01 95.0% 94.0%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3964082 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.83 77.0 6.29e-01 100.0% 60.7%
3739320 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.79 47.0 3.37e-01 96.2% 22.9%
3015535 4963.1.2.1 ↗ alpha complex topology › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal additional helical subdomain in reovirus polymerase lambda3 › N-terminal domain in vesicular stomatitis virus RNA polymerase L › Mononeg_RNA_pol 0.74 66.0 4.29e-01 100.0% 68.8%
3502265 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.71 47.0 3.50e-01 97.5% 29.2%
3709449 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 48.0 3.23e-01 77.5% 37.3%
3816742 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.65 45.0 2.96e-01 71.2% 56.6%
3457141 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.64 45.0 2.99e-01 72.5% 44.4%
3584285 5.1.11.15 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › DPPIV_N 0.64 47.0 2.95e-01 77.5% 24.0%
4024144 220.1.1.44 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.64 45.0 4.13e-01 73.8% 100.0%
5083918 192.2.1.2 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.64 56.0 4.76e-01 96.2% 59.2%
4958423 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.64 45.0 3.28e-01 73.8% 79.5%
3345737 5.1.3.65 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.64 43.0 2.90e-01 70.0% 45.8%
3493765 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 46.0 2.86e-01 76.2% 36.8%
3484246 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.63 45.0 2.90e-01 75.0% 47.2%
4011464 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 44.0 2.85e-01 72.5% 39.7%
3628972 633.23.1.5 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like 0.63 45.0 3.24e-01 97.5% 28.1%
3593624 633.23.1.23 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin 0.62 44.0 3.27e-01 97.5% 30.4%
3932908 633.23.1.5 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like 0.61 43.0 3.13e-01 97.5% 26.8%
3831275 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.61 42.0 2.77e-01 70.0% 57.0%
3502952 4292.2.1.0 ↗ a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain 0.60 47.0 4.34e-01 83.7% 79.0%
3448051 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 40.0 2.81e-01 70.0% 29.8%
3647399 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 45.0 2.80e-01 81.2% 32.4%
3935617 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 41.0 2.80e-01 77.5% 52.1%
4646778 12.3.1.19 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.57 42.0 2.97e-01 78.8% 86.8%
3225640 220.1.1.168 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 0.57 40.0 3.47e-01 73.8% 79.2%
3260335 5.1.4.14 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.56 48.0 3.16e-01 97.5% 57.3%
3929729 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.56 52.0 3.81e-01 100.0% 60.5%
3467789 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.55 47.0 3.18e-01 97.5% 85.2%
3600254 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.55 50.0 3.78e-01 100.0% 53.0%
3744042 216.1.1.27 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › HGTP_anticodon2 0.55 47.0 3.92e-01 97.5% 84.1%
3077774 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.54 46.0 3.95e-01 96.2% 85.8%
3609092 633.23.1.23 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin 0.54 50.0 3.83e-01 100.0% 54.9%
3598725 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.54 49.0 3.66e-01 98.8% 51.3%
4933961 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.54 41.0 2.61e-01 81.2% 43.1%
4946040 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 41.0 2.72e-01 81.2% 50.9%
3630405 633.23.1.5 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Clc-like 0.54 50.0 3.54e-01 100.0% 60.5%
3520998 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.54 49.0 3.71e-01 98.8% 55.3%
3925754 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.53 48.0 3.97e-01 96.2% 80.7%
4014852 3887.1.1.0 ↗ a+b two layers › Yeast killer toxin-like › Yeast killer toxin-like › Yeast killer toxin-like 0.53 44.0 4.18e-01 92.5% 76.6%
3490378 331.4.1.9 ↗ a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C 0.53 36.0 3.66e-01 76.2% 71.2%
4932458 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 39.0 2.70e-01 81.2% 57.6%
3228567 2484.1.1.162 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › F-box 0.52 42.0 3.58e-01 92.5% 51.4%
4027162 5.1.11.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.52 44.0 2.84e-01 97.5% 95.7%
3593073 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.51 46.0 3.40e-01 96.2% 47.7%
3421076 5.1.3.142 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.51 44.0 3.00e-01 97.5% 89.2%
3337961 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.51 42.0 2.89e-01 98.8% 73.0%
3760199 331.2.1.6 ↗ a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › Med14_RM8 0.51 38.0 3.59e-01 81.2% 85.0%